RNA–Protein interactions for RNA: ENST00000430293.1

POLR1B-206, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-206ENST00000430293 NISCHQ9Y2I1 1504 aa30.91■■■□□ 2.54
POLR1B-206ENST00000430293 ABCC9O60706 1549 aa27.76■■■□□ 2.03
POLR1B-206ENST00000430293 CCDC180Q9P1Z9 1646 aa27.66■■■□□ 2.02
POLR1B-206ENST00000430293 DNAJC5BQ9UF47 199 aa26.55■■□□□ 1.84
POLR1B-206ENST00000430293 RB1CC1Q8TDY2 1594 aa26.22■■□□□ 1.79
POLR1B-206ENST00000430293 NACADO15069 1562 aa26.02■■□□□ 1.76
POLR1B-206ENST00000430293 UNC13AQ9UPW8 1703 aa25.8■■□□□ 1.72
POLR1B-206ENST00000430293 MYO15BQ96JP2 1530 aa25.8■■□□□ 1.72
POLR1B-206ENST00000430293 ZCCHC6Q5VYS8 1495 aaKnown RBP25.73■■□□□ 1.71
POLR1B-206ENST00000430293 DCAF8L2P0C7V8 631 aa25.72■■□□□ 1.71
POLR1B-206ENST00000430293 PABPN1Q86U42 306 aaKnown RBP eCLIP25.7■■□□□ 1.7
POLR1B-206ENST00000430293 BICRAQ9NZM4 1560 aa25.61■■□□□ 1.69
POLR1B-206ENST00000430293 DCAF1Q9Y4B6 1507 aa25.58■■□□□ 1.69
POLR1B-206ENST00000430293 SCRIBQ14160 1630 aa25.19■■□□□ 1.62
POLR1B-206ENST00000430293 CC2D2AQ9P2K1 1620 aa25.12■■□□□ 1.61
POLR1B-206ENST00000430293 SHROOM4Q9ULL8 1493 aa25.12■■□□□ 1.61
POLR1B-206ENST00000430293 CECR2Q9BXF3 1484 aa25.06■■□□□ 1.6
POLR1B-206ENST00000430293 EIF4G1Q04637 1599 aaKnown RBP24.94■■□□□ 1.58
POLR1B-206ENST00000430293 DNAJC5Q9H3Z4 198 aa24.68■■□□□ 1.54
POLR1B-206ENST00000430293 CUX2O14529 1486 aa24.16■■□□□ 1.46
POLR1B-206ENST00000430293 SMARCA4P51532 1647 aa24.08■■□□□ 1.45
POLR1B-206ENST00000430293 NCAPD3P42695 1498 aa24.02■■□□□ 1.44
POLR1B-206ENST00000430293 ATAD2BQ9ULI0 1458 aa24■■□□□ 1.43
POLR1B-206ENST00000430293 BAZ1AQ9NRL2 1556 aaPredicted RBP23.96■■□□□ 1.43
POLR1B-206ENST00000430293 ERCC6Q03468 1493 aa23.93■■□□□ 1.42
POLR1B-206ENST00000430293 SMARCA2P51531 1590 aa23.92■■□□□ 1.42
POLR1B-206ENST00000430293 HMGXB3Q12766 1538 aa23.91■■□□□ 1.42
POLR1B-206ENST00000430293 PEG3Q9GZU2 1588 aa23.87■■□□□ 1.41
POLR1B-206ENST00000430293 MROH2BQ7Z745 1585 aa23.84■■□□□ 1.41
POLR1B-206ENST00000430293 NESP48681 1621 aa23.75■■□□□ 1.39
POLR1B-206ENST00000430293 BAZ1BQ9UIG0 1483 aaKnown RBP23.75■■□□□ 1.39
POLR1B-206ENST00000430293 THOC2Q8NI27 1593 aaKnown RBP23.69■■□□□ 1.38
POLR1B-206ENST00000430293 WIZO95785 1651 aa23.57■■□□□ 1.36
POLR1B-206ENST00000430293 LAMC3Q9Y6N6 1575 aa23.5■■□□□ 1.35
POLR1B-206ENST00000430293 KIF21AQ7Z4S6 1674 aa23.49■■□□□ 1.35
POLR1B-206ENST00000430293 RSF1Q96T23 1441 aaPredicted RBP23.42■■□□□ 1.34
POLR1B-206ENST00000430293 TOP2AP11388 1531 aaKnown RBP23.29■■□□□ 1.32
POLR1B-206ENST00000430293 PDS5BQ9NTI5 1447 aa23.29■■□□□ 1.32
POLR1B-206ENST00000430293 TRIM41Q8WV44 630 aa23.27■■□□□ 1.32
POLR1B-206ENST00000430293 CADPSQ9ULU8 1353 aa23.26■■□□□ 1.31
POLR1B-206ENST00000430293 WDR62O43379 1518 aa23.2■■□□□ 1.3
POLR1B-206ENST00000430293 MRC2Q9UBG0 1479 aa23.17■■□□□ 1.3
POLR1B-206ENST00000430293 CFTRP13569 1480 aa23.11■■□□□ 1.29
POLR1B-206ENST00000430293 FANCD2Q9BXW9 1451 aa23.02■■□□□ 1.28
POLR1B-206ENST00000430293 CEP164Q9UPV0 1460 aa23.01■■□□□ 1.27
POLR1B-206ENST00000430293 CCDC88BA6NC98 1476 aa22.98■■□□□ 1.27
POLR1B-206ENST00000430293 PRDM2Q13029 1718 aa22.95■■□□□ 1.26
POLR1B-206ENST00000430293 URB2Q14146 1524 aaKnown RBP22.87■■□□□ 1.25
POLR1B-206ENST00000430293 OSCARQ8IYS5 282 aa22.85■■□□□ 1.25
POLR1B-206ENST00000430293 RIMBP3CA6NJZ7 1639 aa22.77■■□□□ 1.24
POLR1B-206ENST00000430293 RIMBP3BA6NNM3 1639 aa22.77■■□□□ 1.24
POLR1B-206ENST00000430293 RIMBP3Q9UFD9 1639 aa22.77■■□□□ 1.24
POLR1B-206ENST00000430293 TOPBP1Q92547 1522 aa22.65■■□□□ 1.22
POLR1B-206ENST00000430293 ARHGEF11O15085 1522 aa22.62■■□□□ 1.21
POLR1B-206ENST00000430293 ZNF608Q9ULD9 1512 aaPredicted RBP22.6■■□□□ 1.21
POLR1B-206ENST00000430293 DNMBPQ6XZF7 1577 aa22.59■■□□□ 1.21
POLR1B-206ENST00000430293 IFT140Q96RY7 1462 aa22.55■■□□□ 1.2
POLR1B-206ENST00000430293 ABCC8Q09428 1581 aa22.54■■□□□ 1.2
POLR1B-206ENST00000430293 EIF4G3O43432 1585 aaKnown RBP22.47■■□□□ 1.19
POLR1B-206ENST00000430293 TARBP1Q13395 1621 aaKnown RBP22.46■■□□□ 1.19
POLR1B-206ENST00000430293 POLA1P09884 1462 aaPredicted RBP22.44■■□□□ 1.18
POLR1B-206ENST00000430293 SUPT5HO00267 1087 aaKnown RBP22.43■■□□□ 1.18
POLR1B-206ENST00000430293 CHD1O14646 1710 aa22.43■■□□□ 1.18
POLR1B-206ENST00000430293 CUX1P39880 1505 aa22.39■■□□□ 1.17
POLR1B-206ENST00000430293 ARAP1Q96P48 1450 aa22.38■■□□□ 1.17
POLR1B-206ENST00000430293 CYB5RLQ6IPT4 315 aa22.35■■□□□ 1.17
POLR1B-206ENST00000430293 RAD54L2Q9Y4B4 1467 aa22.34■■□□□ 1.17
POLR1B-206ENST00000430293 FGD5Q6ZNL6 1462 aa22.33■■□□□ 1.16
POLR1B-206ENST00000430293 AQRO60306 1485 aaKnown RBP eCLIP22.3■■□□□ 1.164e-6■■■■■ 31
POLR1B-206ENST00000430293 SOGA1O94964 1423 aa22.25■■□□□ 1.15
POLR1B-206ENST00000430293 WDR97A6NE52 1622 aa22.25■■□□□ 1.15
POLR1B-206ENST00000430293 TRHP20396 242 aaPredicted RBP22.19■■□□□ 1.14
POLR1B-206ENST00000430293 TDRD9Q8NDG6 1382 aaKnown RBP22.19■■□□□ 1.14
POLR1B-206ENST00000430293 CLASP1Q7Z460 1538 aa22.16■■□□□ 1.14
POLR1B-206ENST00000430293 BIVM-ERCC5R4GMW8 1640 aa22.13■■□□□ 1.13
POLR1B-206ENST00000430293 SNAPC4Q5SXM2 1469 aa22.12■■□□□ 1.13
POLR1B-206ENST00000430293 SYNJ1O43426 1573 aa22.11■■□□□ 1.13
POLR1B-206ENST00000430293 ABCA10Q8WWZ4 1543 aa22.1■■□□□ 1.13
POLR1B-206ENST00000430293 TOP2BQ02880 1626 aa22.09■■□□□ 1.13
POLR1B-206ENST00000430293 ABCA5Q8WWZ7 1642 aa22.09■■□□□ 1.13
POLR1B-206ENST00000430293 PBRM1Q86U86 1689 aa22.08■■□□□ 1.13
POLR1B-206ENST00000430293 FBLN2P98095 1184 aa22.07■■□□□ 1.12
POLR1B-206ENST00000430293 GRIN2BQ13224 1484 aa22.07■■□□□ 1.12
POLR1B-206ENST00000430293 MAGI1Q96QZ7 1491 aaPredicted RBP22.06■■□□□ 1.12
POLR1B-206ENST00000430293 WRNQ14191 1432 aaPredicted RBP eCLIP22.06■■□□□ 1.12
POLR1B-206ENST00000430293 GAPVD1Q14C86 1478 aa22.03■■□□□ 1.12
POLR1B-206ENST00000430293 SYNJ2O15056 1496 aa21.98■■□□□ 1.11
POLR1B-206ENST00000430293 ADAMTS12P58397 1594 aa21.91■■□□□ 1.1
POLR1B-206ENST00000430293 AEBP2Q6ZN18 517 aaPredicted RBP21.87■■□□□ 1.09
POLR1B-206ENST00000430293 CHMP7Q8WUX9 453 aaPredicted RBP21.87■■□□□ 1.09
POLR1B-206ENST00000430293 GRIN2AQ12879 1464 aa21.82■■□□□ 1.08
POLR1B-206ENST00000430293 ERICH3Q5RHP9 1530 aa21.81■■□□□ 1.08
POLR1B-206ENST00000430293 CEP170Q5SW79 1584 aa21.78■■□□□ 1.08
POLR1B-206ENST00000430293 ERCC6L2Q5T890 1561 aa21.78■■□□□ 1.08
POLR1B-206ENST00000430293 FHAD1B1AJZ9 1412 aa21.76■■□□□ 1.07
POLR1B-206ENST00000430293 NUP160Q12769 1436 aa21.76■■□□□ 1.07
POLR1B-206ENST00000430293 SHROOM2Q13796 1616 aa21.67■■□□□ 1.06
POLR1B-206ENST00000430293 KIF13AQ9H1H9 1805 aa21.66■■□□□ 1.06
POLR1B-206ENST00000430293 RUSC2Q8N2Y8 1516 aa21.6■■□□□ 1.05
POLR1B-206ENST00000430293 KIF27Q86VH2 1401 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms