RNA–Protein interactions for RNA: ENST00000263331.9

POLR1B-201, Transcript of RNA polymerase I subunit B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene POLR1B, Length 4,558 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-201ENST00000263331 NISCHQ9Y2I1 1504 aa22.96■■□□□ 1.27
POLR1B-201ENST00000263331 DCAF8L2P0C7V8 631 aa21.05■□□□□ 0.96
POLR1B-201ENST00000263331 SUPT5HO00267 1087 aaKnown RBP20.96■□□□□ 0.95
POLR1B-201ENST00000263331 SHROOM4Q9ULL8 1493 aa20.83■□□□□ 0.93
POLR1B-201ENST00000263331 PCGF6Q9BYE7 350 aa19.99■□□□□ 0.79
POLR1B-201ENST00000263331 HRCP23327 699 aa19.73■□□□□ 0.75
POLR1B-201ENST00000263331 CHIC1Q5VXU3 224 aa19.7■□□□□ 0.74
POLR1B-201ENST00000263331 ZEB1P37275 1124 aaPredicted RBP19.66■□□□□ 0.74
POLR1B-201ENST00000263331 EHMT2Q96KQ7 1210 aa19.56■□□□□ 0.72
POLR1B-201ENST00000263331 TRIM41Q8WV44 630 aa19.53■□□□□ 0.72
POLR1B-201ENST00000263331 FAM9AQ8IZU1 332 aaPredicted RBP19.52■□□□□ 0.72
POLR1B-201ENST00000263331 TRIM26Q12899 539 aaPredicted RBP19.46■□□□□ 0.71
POLR1B-201ENST00000263331 LOC105371045A0A1W2PR82 267 aa19.3■□□□□ 0.68
POLR1B-201ENST00000263331 ZCCHC6Q5VYS8 1495 aaKnown RBP19.27■□□□□ 0.67
POLR1B-201ENST00000263331 PELP1Q8IZL8 1130 aaKnown RBP19.25■□□□□ 0.67
POLR1B-201ENST00000263331 CCER1Q8TC90 406 aaPredicted RBP19.16■□□□□ 0.66
POLR1B-201ENST00000263331 APLP2Q06481 763 aa19.13■□□□□ 0.65
POLR1B-201ENST00000263331 PPARGC1BQ86YN6 1023 aaKnown RBP19.13■□□□□ 0.65
POLR1B-201ENST00000263331 CENPBP07199 599 aaPredicted RBP19.12■□□□□ 0.65
POLR1B-201ENST00000263331 CCDC180Q9P1Z9 1646 aa19.04■□□□□ 0.64
POLR1B-201ENST00000263331 TTBK1Q5TCY1 1321 aaPredicted RBP18.99■□□□□ 0.63
POLR1B-201ENST00000263331 DCAF1Q9Y4B6 1507 aa18.94■□□□□ 0.62
POLR1B-201ENST00000263331 UBTFP17480 764 aaKnown RBP18.89■□□□□ 0.61
POLR1B-201ENST00000263331 MYO15BQ96JP2 1530 aa18.78■□□□□ 0.6
POLR1B-201ENST00000263331 MYT1Q01538 1121 aa18.69■□□□□ 0.58
POLR1B-201ENST00000263331 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.61■□□□□ 0.57
POLR1B-201ENST00000263331 RANGAP1P46060 587 aaPredicted RBP18.59■□□□□ 0.57
POLR1B-201ENST00000263331 DIEXFQ68CQ4 756 aaKnown RBP18.55■□□□□ 0.56
POLR1B-201ENST00000263331 YTHDC1Q96MU7 727 aaKnown RBP18.54■□□□□ 0.56
POLR1B-201ENST00000263331 ABCC9O60706 1549 aa18.46■□□□□ 0.55
POLR1B-201ENST00000263331 SCRIBQ14160 1630 aa18.45■□□□□ 0.54
POLR1B-201ENST00000263331 HNRNPUL2Q1KMD3 747 aaKnown RBP18.41■□□□□ 0.54
POLR1B-201ENST00000263331 RSF1Q96T23 1441 aaPredicted RBP18.38■□□□□ 0.53
POLR1B-201ENST00000263331 ACIN1Q9UKV3 1341 aaKnown RBP18.32■□□□□ 0.52
POLR1B-201ENST00000263331 CSRNP3Q8WYN3 585 aa18.27■□□□□ 0.52
POLR1B-201ENST00000263331 ZNF316A6NFI3 1004 aaPredicted RBP18.27■□□□□ 0.51
POLR1B-201ENST00000263331 GTF3C3Q9Y5Q9 886 aa18.27■□□□□ 0.51
POLR1B-201ENST00000263331 NEFLP07196 543 aa18.22■□□□□ 0.51
POLR1B-201ENST00000263331 ATP1B4Q9UN42 357 aaPredicted RBP18.21■□□□□ 0.51
POLR1B-201ENST00000263331 RB1CC1Q8TDY2 1594 aa18.15■□□□□ 0.5
POLR1B-201ENST00000263331 ITGAEP38570 1179 aa18.09■□□□□ 0.49
POLR1B-201ENST00000263331 SCAF1Q9H7N4 1312 aaKnown RBP18.09■□□□□ 0.49
POLR1B-201ENST00000263331 PABPN1Q86U42 306 aaKnown RBP eCLIP18.07■□□□□ 0.48
POLR1B-201ENST00000263331 NACADO15069 1562 aa18.04■□□□□ 0.48
POLR1B-201ENST00000263331 ERICH6Q7L0X2 663 aa18.04■□□□□ 0.48
POLR1B-201ENST00000263331 NEUROD1Q13562 356 aa18■□□□□ 0.47
POLR1B-201ENST00000263331 EEA1Q15075 1411 aa18■□□□□ 0.47
POLR1B-201ENST00000263331 CEP162Q5TB80 1403 aa17.93■□□□□ 0.46
POLR1B-201ENST00000263331 TNIKQ9UKE5 1360 aa17.9■□□□□ 0.46
POLR1B-201ENST00000263331 CECR2Q9BXF3 1484 aa17.89■□□□□ 0.45
POLR1B-201ENST00000263331 CLSPNQ9HAW4 1339 aa17.88■□□□□ 0.45
POLR1B-201ENST00000263331 GOLGA3Q08378 1498 aa17.85■□□□□ 0.45
POLR1B-201ENST00000263331 BAZ1AQ9NRL2 1556 aaPredicted RBP17.85■□□□□ 0.45
POLR1B-201ENST00000263331 FAM50AQ14320 339 aaKnown RBP17.81■□□□□ 0.44
POLR1B-201ENST00000263331 CLIP1P30622 1438 aa17.8■□□□□ 0.44
POLR1B-201ENST00000263331 MROH2BQ7Z745 1585 aa17.78■□□□□ 0.44
POLR1B-201ENST00000263331 MIER1Q8N108 512 aa17.73■□□□□ 0.43
POLR1B-201ENST00000263331 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
POLR1B-201ENST00000263331 CEP164Q9UPV0 1460 aa17.69■□□□□ 0.42
POLR1B-201ENST00000263331 ANP32CO43423 234 aa17.69■□□□□ 0.42
POLR1B-201ENST00000263331 SOGA1O94964 1423 aa17.62■□□□□ 0.41
POLR1B-201ENST00000263331 BCANQ96GW7 911 aa17.59■□□□□ 0.41
POLR1B-201ENST00000263331 CCDC88BA6NC98 1476 aa17.59■□□□□ 0.41
POLR1B-201ENST00000263331 WIZO95785 1651 aa17.57■□□□□ 0.4
POLR1B-201ENST00000263331 TOP2AP11388 1531 aaKnown RBP17.53■□□□□ 0.4
POLR1B-201ENST00000263331 ABCC8Q09428 1581 aa17.53■□□□□ 0.4
POLR1B-201ENST00000263331 TRIM52Q96A61 297 aa17.5■□□□□ 0.39
POLR1B-201ENST00000263331 BAZ1BQ9UIG0 1483 aaKnown RBP17.48■□□□□ 0.39
POLR1B-201ENST00000263331 P3H3Q8IVL6 736 aa17.48■□□□□ 0.39
POLR1B-201ENST00000263331 VPS8Q8N3P4 1428 aa17.47■□□□□ 0.39
POLR1B-201ENST00000263331 POLR3GLQ9BT43 218 aa17.46■□□□□ 0.39
POLR1B-201ENST00000263331 CDK11AQ9UQ88 783 aaPredicted RBP17.45■□□□□ 0.38
POLR1B-201ENST00000263331 DDX10Q13206 875 aaKnown RBP17.45■□□□□ 0.38
POLR1B-201ENST00000263331 FKBP8Q14318 412 aa17.43■□□□□ 0.38
POLR1B-201ENST00000263331 TONSLQ96HA7 1378 aa17.42■□□□□ 0.38
POLR1B-201ENST00000263331 KIF27Q86VH2 1401 aa17.4■□□□□ 0.38
POLR1B-201ENST00000263331 SMARCA4P51532 1647 aa17.31■□□□□ 0.36
POLR1B-201ENST00000263331 CNGB1Q14028 1251 aaPredicted RBP17.31■□□□□ 0.36
POLR1B-201ENST00000263331 CCNB3Q8WWL7 1395 aa17.3■□□□□ 0.36
POLR1B-201ENST00000263331 HNRNPUQ00839 825 aaKnown RBP eCLIP17.25■□□□□ 0.35
POLR1B-201ENST00000263331 RTL5Q5HYW3 569 aaPredicted RBP17.24■□□□□ 0.35
POLR1B-201ENST00000263331 SUPT16HQ9Y5B9 1047 aaKnown RBP17.24■□□□□ 0.35
POLR1B-201ENST00000263331 DAXXQ9UER7 740 aaPredicted RBP17.24■□□□□ 0.35
POLR1B-201ENST00000263331 RUSC2Q8N2Y8 1516 aa17.23■□□□□ 0.35
POLR1B-201ENST00000263331 TIMELESSQ9UNS1 1208 aa17.22■□□□□ 0.35
POLR1B-201ENST00000263331 SMARCA2P51531 1590 aa17.22■□□□□ 0.35
POLR1B-201ENST00000263331 MTUS2Q5JR59 1369 aa17.22■□□□□ 0.35
POLR1B-201ENST00000263331 KANK4Q5T7N3 995 aaPredicted RBP17.18■□□□□ 0.34
POLR1B-201ENST00000263331 FHAD1B1AJZ9 1412 aa17.16■□□□□ 0.34
POLR1B-201ENST00000263331 RAPGEF2Q9Y4G8 1499 aa17.15■□□□□ 0.34
POLR1B-201ENST00000263331 ZNF326Q5BKZ1 582 aaKnown RBP17.15■□□□□ 0.34
POLR1B-201ENST00000263331 HIRIP3Q9BW71 556 aaPredicted RBP17.13■□□□□ 0.33
POLR1B-201ENST00000263331 SETD5Q9C0A6 1442 aa17.12■□□□□ 0.33
POLR1B-201ENST00000263331 SIN3AQ96ST3 1273 aa17.11■□□□□ 0.33
POLR1B-201ENST00000263331 ANP32EQ9BTT0 268 aa17.11■□□□□ 0.33
POLR1B-201ENST00000263331 DHX57Q6P158 1386 aaKnown RBP17.1■□□□□ 0.33
POLR1B-201ENST00000263331 CARMIL1Q5VZK9 1371 aa17.09■□□□□ 0.33
POLR1B-201ENST00000263331 EIF4G2P78344 907 aaKnown RBP eCLIP17.09■□□□□ 0.33
POLR1B-201ENST00000263331 MYT1LQ9UL68 1186 aa17.09■□□□□ 0.33
POLR1B-201ENST00000263331 ATAD2BQ9ULI0 1458 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms