RNA–Protein interactions for RNA: ENST00000424062.1

POLR1B-205, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-205ENST00000424062 NISCHQ9Y2I1 1504 aa27.71■■■□□ 2.03
POLR1B-205ENST00000424062 CCDC180Q9P1Z9 1646 aa24.36■■□□□ 1.49
POLR1B-205ENST00000424062 ABCC9O60706 1549 aa23.45■■□□□ 1.34
POLR1B-205ENST00000424062 DCAF8L2P0C7V8 631 aa23.15■■□□□ 1.3
POLR1B-205ENST00000424062 ZCCHC6Q5VYS8 1495 aaKnown RBP23.14■■□□□ 1.29
POLR1B-205ENST00000424062 DCAF1Q9Y4B6 1507 aa22.92■■□□□ 1.26
POLR1B-205ENST00000424062 NACADO15069 1562 aa22.85■■□□□ 1.25
POLR1B-205ENST00000424062 MYO15BQ96JP2 1530 aa22.84■■□□□ 1.25
POLR1B-205ENST00000424062 RB1CC1Q8TDY2 1594 aa22.76■■□□□ 1.23
POLR1B-205ENST00000424062 SCRIBQ14160 1630 aa22.31■■□□□ 1.16
POLR1B-205ENST00000424062 SHROOM4Q9ULL8 1493 aa22.28■■□□□ 1.16
POLR1B-205ENST00000424062 UNC13AQ9UPW8 1703 aa22.17■■□□□ 1.14
POLR1B-205ENST00000424062 PABPN1Q86U42 306 aaKnown RBP eCLIP22.08■■□□□ 1.13
POLR1B-205ENST00000424062 BICRAQ9NZM4 1560 aa21.99■■□□□ 1.11
POLR1B-205ENST00000424062 CECR2Q9BXF3 1484 aa21.53■■□□□ 1.04
POLR1B-205ENST00000424062 BAZ1AQ9NRL2 1556 aaPredicted RBP21.44■■□□□ 1.02
POLR1B-205ENST00000424062 EIF4G1Q04637 1599 aaKnown RBP21.4■■□□□ 1.02
POLR1B-205ENST00000424062 SMARCA4P51532 1647 aa21.37■■□□□ 1.01
POLR1B-205ENST00000424062 MROH2BQ7Z745 1585 aa21.36■■□□□ 1.01
POLR1B-205ENST00000424062 RSF1Q96T23 1441 aaPredicted RBP21.31■■□□□ 1
POLR1B-205ENST00000424062 SUPT5HO00267 1087 aaKnown RBP21.28■■□□□ 1
POLR1B-205ENST00000424062 CC2D2AQ9P2K1 1620 aa21.21■□□□□ 0.99
POLR1B-205ENST00000424062 ATAD2BQ9ULI0 1458 aa21.17■□□□□ 0.98
POLR1B-205ENST00000424062 SMARCA2P51531 1590 aa21.17■□□□□ 0.98
POLR1B-205ENST00000424062 WIZO95785 1651 aa21.15■□□□□ 0.98
POLR1B-205ENST00000424062 PEG3Q9GZU2 1588 aa21.13■□□□□ 0.97
POLR1B-205ENST00000424062 DNAJC5BQ9UF47 199 aa21.12■□□□□ 0.97
POLR1B-205ENST00000424062 NCAPD3P42695 1498 aa21.09■□□□□ 0.97
POLR1B-205ENST00000424062 BAZ1BQ9UIG0 1483 aaKnown RBP21.03■□□□□ 0.96
POLR1B-205ENST00000424062 HMGXB3Q12766 1538 aa20.98■□□□□ 0.95
POLR1B-205ENST00000424062 TOP2AP11388 1531 aaKnown RBP20.95■□□□□ 0.94
POLR1B-205ENST00000424062 CCDC88BA6NC98 1476 aa20.75■□□□□ 0.91
POLR1B-205ENST00000424062 CADPSQ9ULU8 1353 aa20.54■□□□□ 0.88
POLR1B-205ENST00000424062 CFTRP13569 1480 aa20.47■□□□□ 0.87
POLR1B-205ENST00000424062 LAMC3Q9Y6N6 1575 aa20.43■□□□□ 0.86
POLR1B-205ENST00000424062 NESP48681 1621 aa20.42■□□□□ 0.86
POLR1B-205ENST00000424062 PDS5BQ9NTI5 1447 aa20.36■□□□□ 0.85
POLR1B-205ENST00000424062 PRDM2Q13029 1718 aa20.3■□□□□ 0.84
POLR1B-205ENST00000424062 FANCD2Q9BXW9 1451 aa20.27■□□□□ 0.84
POLR1B-205ENST00000424062 ERCC6Q03468 1493 aa20.21■□□□□ 0.83
POLR1B-205ENST00000424062 CEP164Q9UPV0 1460 aa20.2■□□□□ 0.82
POLR1B-205ENST00000424062 KIF21AQ7Z4S6 1674 aa20.15■□□□□ 0.82
POLR1B-205ENST00000424062 CHIC1Q5VXU3 224 aa20.11■□□□□ 0.81
POLR1B-205ENST00000424062 ABCC8Q09428 1581 aa20.1■□□□□ 0.81
POLR1B-205ENST00000424062 WRNQ14191 1432 aaPredicted RBP eCLIP20.1■□□□□ 0.81
POLR1B-205ENST00000424062 TRIM41Q8WV44 630 aa20.09■□□□□ 0.81
POLR1B-205ENST00000424062 MRC2Q9UBG0 1479 aa20.06■□□□□ 0.8
POLR1B-205ENST00000424062 CUX1P39880 1505 aa20.01■□□□□ 0.79
POLR1B-205ENST00000424062 URB2Q14146 1524 aaKnown RBP20.01■□□□□ 0.79
POLR1B-205ENST00000424062 TOPBP1Q92547 1522 aa19.99■□□□□ 0.79
POLR1B-205ENST00000424062 DNMBPQ6XZF7 1577 aa19.99■□□□□ 0.79
POLR1B-205ENST00000424062 SYNJ1O43426 1573 aa19.96■□□□□ 0.79
POLR1B-205ENST00000424062 TOP2BQ02880 1626 aa19.95■□□□□ 0.78
POLR1B-205ENST00000424062 THOC2Q8NI27 1593 aaKnown RBP19.94■□□□□ 0.78
POLR1B-205ENST00000424062 WDR62O43379 1518 aa19.93■□□□□ 0.78
POLR1B-205ENST00000424062 BIVM-ERCC5R4GMW8 1640 aa19.92■□□□□ 0.78
POLR1B-205ENST00000424062 FGD5Q6ZNL6 1462 aa19.87■□□□□ 0.77
POLR1B-205ENST00000424062 SOGA1O94964 1423 aa19.85■□□□□ 0.77
POLR1B-205ENST00000424062 POLA1P09884 1462 aaPredicted RBP19.84■□□□□ 0.77
POLR1B-205ENST00000424062 RAD54L2Q9Y4B4 1467 aa19.78■□□□□ 0.76
POLR1B-205ENST00000424062 CUX2O14529 1486 aa19.77■□□□□ 0.76
POLR1B-205ENST00000424062 IFT140Q96RY7 1462 aa19.77■□□□□ 0.76
POLR1B-205ENST00000424062 ABCA10Q8WWZ4 1543 aa19.71■□□□□ 0.75
POLR1B-205ENST00000424062 TARBP1Q13395 1621 aaKnown RBP19.69■□□□□ 0.74
POLR1B-205ENST00000424062 KIF27Q86VH2 1401 aa19.68■□□□□ 0.74
POLR1B-205ENST00000424062 TDRD9Q8NDG6 1382 aaKnown RBP19.66■□□□□ 0.74
POLR1B-205ENST00000424062 FAM9AQ8IZU1 332 aaPredicted RBP19.65■□□□□ 0.74
POLR1B-205ENST00000424062 EEA1Q15075 1411 aa19.62■□□□□ 0.73
POLR1B-205ENST00000424062 AQRO60306 1485 aaKnown RBP eCLIP19.6■□□□□ 0.734e-6■■■■■ 31
POLR1B-205ENST00000424062 WDR97A6NE52 1622 aa19.6■□□□□ 0.73
POLR1B-205ENST00000424062 RUSC2Q8N2Y8 1516 aa19.6■□□□□ 0.73
POLR1B-205ENST00000424062 ZNF608Q9ULD9 1512 aaPredicted RBP19.6■□□□□ 0.73
POLR1B-205ENST00000424062 GAPVD1Q14C86 1478 aa19.6■□□□□ 0.73
POLR1B-205ENST00000424062 CSRNP3Q8WYN3 585 aa19.59■□□□□ 0.73
POLR1B-205ENST00000424062 IGF1RP08069 1367 aa19.54■□□□□ 0.72
POLR1B-205ENST00000424062 ABCA5Q8WWZ7 1642 aa19.54■□□□□ 0.72
POLR1B-205ENST00000424062 GRIN2BQ13224 1484 aa19.52■□□□□ 0.72
POLR1B-205ENST00000424062 EIF4G3O43432 1585 aaKnown RBP19.5■□□□□ 0.71
POLR1B-205ENST00000424062 ERICH3Q5RHP9 1530 aa19.48■□□□□ 0.71
POLR1B-205ENST00000424062 PBRM1Q86U86 1689 aa19.45■□□□□ 0.7
POLR1B-205ENST00000424062 CARMIL1Q5VZK9 1371 aa19.44■□□□□ 0.7
POLR1B-205ENST00000424062 SNAPC4Q5SXM2 1469 aa19.4■□□□□ 0.7
POLR1B-205ENST00000424062 MAGI1Q96QZ7 1491 aaPredicted RBP19.4■□□□□ 0.7
POLR1B-205ENST00000424062 CHMP7Q8WUX9 453 aaPredicted RBP19.39■□□□□ 0.69
POLR1B-205ENST00000424062 FHAD1B1AJZ9 1412 aa19.39■□□□□ 0.69
POLR1B-205ENST00000424062 CUL7Q14999 1698 aa19.39■□□□□ 0.69
POLR1B-205ENST00000424062 FBLN2P98095 1184 aa19.37■□□□□ 0.69
POLR1B-205ENST00000424062 EHMT2Q96KQ7 1210 aa19.37■□□□□ 0.69
POLR1B-205ENST00000424062 PRXQ9BXM0 1461 aa19.36■□□□□ 0.69
POLR1B-205ENST00000424062 RAPGEF2Q9Y4G8 1499 aa19.35■□□□□ 0.69
POLR1B-205ENST00000424062 LOC105371045A0A1W2PR82 267 aa19.33■□□□□ 0.68
POLR1B-205ENST00000424062 UBTFP17480 764 aaKnown RBP19.32■□□□□ 0.68
POLR1B-205ENST00000424062 SYNJ2O15056 1496 aa19.32■□□□□ 0.68
POLR1B-205ENST00000424062 ADAMTS12P58397 1594 aa19.32■□□□□ 0.68
POLR1B-205ENST00000424062 KIF21BO75037 1637 aa19.31■□□□□ 0.68
POLR1B-205ENST00000424062 GOLGA3Q08378 1498 aa19.28■□□□□ 0.68
POLR1B-205ENST00000424062 GRIN2AQ12879 1464 aa19.24■□□□□ 0.67
POLR1B-205ENST00000424062 CHD1O14646 1710 aa19.18■□□□□ 0.66
POLR1B-205ENST00000424062 TNIKQ9UKE5 1360 aa19.17■□□□□ 0.66
POLR1B-205ENST00000424062 OSCARQ8IYS5 282 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms