Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
NUCKS1Q9H1E3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.83■■□□□ 1.73
NUCKS1Q9H1E3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
NUCKS1Q9H1E3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.83■■□□□ 1.73
NUCKS1Q9H1E3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.72
NUCKS1Q9H1E3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
NUCKS1Q9H1E3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
NUCKS1Q9H1E3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
NUCKS1Q9H1E3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.82■■□□□ 1.72
NUCKS1Q9H1E3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
NUCKS1Q9H1E3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.82■■□□□ 1.72
NUCKS1Q9H1E3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
NUCKS1Q9H1E3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NUCKS1Q9H1E3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
NUCKS1Q9H1E3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
NUCKS1Q9H1E3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.81■■□□□ 1.72
NUCKS1Q9H1E3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.81■■□□□ 1.72
NUCKS1Q9H1E3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NUCKS1Q9H1E3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
NUCKS1Q9H1E3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
NUCKS1Q9H1E3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
NUCKS1Q9H1E3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
NUCKS1Q9H1E3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
NUCKS1Q9H1E3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
NUCKS1Q9H1E3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
NUCKS1Q9H1E3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
NUCKS1Q9H1E3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
NUCKS1Q9H1E3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.79■■□□□ 1.72
NUCKS1Q9H1E3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.79■■□□□ 1.72
NUCKS1Q9H1E3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.79■■□□□ 1.72
NUCKS1Q9H1E3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
NUCKS1Q9H1E3 AP003733.4-201ENST00000623785 1697 ntBASIC25.79■■□□□ 1.72
NUCKS1Q9H1E3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
NUCKS1Q9H1E3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.78■■□□□ 1.72
NUCKS1Q9H1E3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.78■■□□□ 1.72
NUCKS1Q9H1E3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.77■■□□□ 1.72
NUCKS1Q9H1E3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.76■■□□□ 1.72
NUCKS1Q9H1E3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
NUCKS1Q9H1E3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.76■■□□□ 1.71
NUCKS1Q9H1E3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.76■■□□□ 1.71
NUCKS1Q9H1E3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
NUCKS1Q9H1E3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
NUCKS1Q9H1E3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
NUCKS1Q9H1E3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.75■■□□□ 1.71
NUCKS1Q9H1E3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
NUCKS1Q9H1E3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
NUCKS1Q9H1E3 RNF126P1-201ENST00000567452 1320 ntBASIC25.75■■□□□ 1.71
NUCKS1Q9H1E3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
NUCKS1Q9H1E3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.75■■□□□ 1.71
NUCKS1Q9H1E3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.74■■□□□ 1.71
NUCKS1Q9H1E3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
NUCKS1Q9H1E3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.74■■□□□ 1.71
NUCKS1Q9H1E3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
NUCKS1Q9H1E3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
NUCKS1Q9H1E3 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.74■■□□□ 1.71
NUCKS1Q9H1E3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
NUCKS1Q9H1E3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
NUCKS1Q9H1E3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
NUCKS1Q9H1E3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.73■■□□□ 1.71
NUCKS1Q9H1E3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
NUCKS1Q9H1E3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
NUCKS1Q9H1E3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
NUCKS1Q9H1E3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
NUCKS1Q9H1E3 RARRES2P2-201ENST00000394842 485 ntBASIC25.73■■□□□ 1.71
NUCKS1Q9H1E3 AC025884.2-201ENST00000553429 711 ntBASIC25.73■■□□□ 1.71
NUCKS1Q9H1E3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.73■■□□□ 1.71
NUCKS1Q9H1E3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
NUCKS1Q9H1E3 SLC6A10P-202ENST00000431994 2058 ntBASIC25.72■■□□□ 1.71
NUCKS1Q9H1E3 AL157400.5-201ENST00000507624 621 ntBASIC25.72■■□□□ 1.71
NUCKS1Q9H1E3 MIR3960-201ENST00000583311 91 ntBASIC25.72■■□□□ 1.71
NUCKS1Q9H1E3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
NUCKS1Q9H1E3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
NUCKS1Q9H1E3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.72■■□□□ 1.71
NUCKS1Q9H1E3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NUCKS1Q9H1E3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
NUCKS1Q9H1E3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
NUCKS1Q9H1E3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
NUCKS1Q9H1E3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NUCKS1Q9H1E3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.71■■□□□ 1.71
NUCKS1Q9H1E3 AC092296.2-201ENST00000589470 999 ntBASIC25.71■■□□□ 1.71
NUCKS1Q9H1E3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
NUCKS1Q9H1E3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
NUCKS1Q9H1E3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
NUCKS1Q9H1E3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
NUCKS1Q9H1E3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.71■■□□□ 1.71
NUCKS1Q9H1E3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.7■■□□□ 1.71
NUCKS1Q9H1E3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
NUCKS1Q9H1E3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
NUCKS1Q9H1E3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
NUCKS1Q9H1E3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
NUCKS1Q9H1E3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
NUCKS1Q9H1E3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.69■■□□□ 1.7
NUCKS1Q9H1E3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
NUCKS1Q9H1E3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
NUCKS1Q9H1E3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
NUCKS1Q9H1E3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.69■■□□□ 1.7
NUCKS1Q9H1E3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.69■■□□□ 1.7
NUCKS1Q9H1E3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NUCKS1Q9H1E3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NUCKS1Q9H1E3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms