Protein–RNA interactions for Protein: Q96N35

LINC00052, Putative uncharacterized protein encoded by LINC00052, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00052Q96N35 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
LINC00052Q96N35 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC00052Q96N35 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.54■□□□□ 0.72
LINC00052Q96N35 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.54■□□□□ 0.72
LINC00052Q96N35 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC00052Q96N35 LINC01124-201ENST00000409786 2117 ntBASIC19.54■□□□□ 0.72
LINC00052Q96N35 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.54■□□□□ 0.72
LINC00052Q96N35 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC00052Q96N35 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
LINC00052Q96N35 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC00052Q96N35 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC00052Q96N35 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC00052Q96N35 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC00052Q96N35 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.53■□□□□ 0.72
LINC00052Q96N35 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.53■□□□□ 0.72
LINC00052Q96N35 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LINC00052Q96N35 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LINC00052Q96N35 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LINC00052Q96N35 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LINC00052Q96N35 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC00052Q96N35 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC00052Q96N35 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
LINC00052Q96N35 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LINC00052Q96N35 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.52■□□□□ 0.72
LINC00052Q96N35 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LINC00052Q96N35 EP400NL-214ENST00000641289 2402 ntBASIC19.52■□□□□ 0.72
LINC00052Q96N35 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LINC00052Q96N35 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LINC00052Q96N35 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC00052Q96N35 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC00052Q96N35 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC00052Q96N35 WHAMMP3-201ENST00000611636 1609 ntBASIC19.51■□□□□ 0.71
LINC00052Q96N35 AC100797.4-201ENST00000631653 1827 ntBASIC19.51■□□□□ 0.71
LINC00052Q96N35 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LINC00052Q96N35 AL121603.2-201ENST00000557373 2117 ntBASIC19.51■□□□□ 0.71
LINC00052Q96N35 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LINC00052Q96N35 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LINC00052Q96N35 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC00052Q96N35 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.51■□□□□ 0.71
LINC00052Q96N35 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LINC00052Q96N35 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LINC00052Q96N35 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC00052Q96N35 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LINC00052Q96N35 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.5■□□□□ 0.71
LINC00052Q96N35 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LINC00052Q96N35 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LINC00052Q96N35 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LINC00052Q96N35 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LINC00052Q96N35 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.5■□□□□ 0.71
LINC00052Q96N35 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC00052Q96N35 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC00052Q96N35 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.49■□□□□ 0.71
LINC00052Q96N35 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC00052Q96N35 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
LINC00052Q96N35 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC00052Q96N35 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC00052Q96N35 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LINC00052Q96N35 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC00052Q96N35 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
LINC00052Q96N35 AP002414.2-202ENST00000590929 1450 ntBASIC19.48■□□□□ 0.71
LINC00052Q96N35 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
LINC00052Q96N35 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
LINC00052Q96N35 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC00052Q96N35 AC127502.1-201ENST00000399971 1502 ntBASIC19.47■□□□□ 0.71
LINC00052Q96N35 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.47■□□□□ 0.71
LINC00052Q96N35 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LINC00052Q96N35 ABCB10P4-201ENST00000566803 2184 ntBASIC19.47■□□□□ 0.71
LINC00052Q96N35 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00052Q96N35 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.46■□□□□ 0.71
LINC00052Q96N35 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.46■□□□□ 0.71
LINC00052Q96N35 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00052Q96N35 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
LINC00052Q96N35 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00052Q96N35 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LINC00052Q96N35 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
LINC00052Q96N35 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LINC00052Q96N35 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LINC00052Q96N35 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.45■□□□□ 0.7
LINC00052Q96N35 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LINC00052Q96N35 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00052Q96N35 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00052Q96N35 AP004609.3-201ENST00000610705 1884 ntBASIC19.44■□□□□ 0.7
LINC00052Q96N35 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00052Q96N35 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LINC00052Q96N35 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00052Q96N35 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.44■□□□□ 0.7
LINC00052Q96N35 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.44■□□□□ 0.7
LINC00052Q96N35 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.44■□□□□ 0.7
LINC00052Q96N35 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00052Q96N35 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00052Q96N35 AC096887.2-201ENST00000623443 1957 ntBASIC19.43■□□□□ 0.7
LINC00052Q96N35 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LINC00052Q96N35 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LINC00052Q96N35 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00052Q96N35 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.42■□□□□ 0.7
LINC00052Q96N35 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00052Q96N35 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00052Q96N35 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00052Q96N35 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00052Q96N35 MIR3665-201ENST00000578708 105 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms