Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.14■■□□□ 1.62
SNX30Q5VWJ9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SNX30Q5VWJ9 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SNX30Q5VWJ9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SNX30Q5VWJ9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.14■■□□□ 1.61
SNX30Q5VWJ9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SNX30Q5VWJ9 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
SNX30Q5VWJ9 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SNX30Q5VWJ9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
SNX30Q5VWJ9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
SNX30Q5VWJ9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SNX30Q5VWJ9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SNX30Q5VWJ9 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SNX30Q5VWJ9 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
SNX30Q5VWJ9 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
SNX30Q5VWJ9 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
SNX30Q5VWJ9 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SNX30Q5VWJ9 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SNX30Q5VWJ9 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SNX30Q5VWJ9 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SNX30Q5VWJ9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
SNX30Q5VWJ9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SNX30Q5VWJ9 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SNX30Q5VWJ9 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
SNX30Q5VWJ9 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.09■■□□□ 1.61
SNX30Q5VWJ9 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SNX30Q5VWJ9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SNX30Q5VWJ9 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
SNX30Q5VWJ9 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
SNX30Q5VWJ9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
SNX30Q5VWJ9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.08■■□□□ 1.61
SNX30Q5VWJ9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.08■■□□□ 1.6
SNX30Q5VWJ9 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.08■■□□□ 1.6
SNX30Q5VWJ9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.08■■□□□ 1.6
SNX30Q5VWJ9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
SNX30Q5VWJ9 YBX1P4-201ENST00000392794 808 ntBASIC25.07■■□□□ 1.6
SNX30Q5VWJ9 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.07■■□□□ 1.6
SNX30Q5VWJ9 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.07■■□□□ 1.6
SNX30Q5VWJ9 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SNX30Q5VWJ9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
SNX30Q5VWJ9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SNX30Q5VWJ9 KRT8P33-201ENST00000508125 1423 ntBASIC25.06■■□□□ 1.6
SNX30Q5VWJ9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.06■■□□□ 1.6
SNX30Q5VWJ9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.06■■□□□ 1.6
SNX30Q5VWJ9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.06■■□□□ 1.6
SNX30Q5VWJ9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.05■■□□□ 1.6
SNX30Q5VWJ9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SNX30Q5VWJ9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SNX30Q5VWJ9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
SNX30Q5VWJ9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SNX30Q5VWJ9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC25.04■■□□□ 1.6
SNX30Q5VWJ9 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
SNX30Q5VWJ9 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SNX30Q5VWJ9 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.04■■□□□ 1.6
SNX30Q5VWJ9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SNX30Q5VWJ9 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SNX30Q5VWJ9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
SNX30Q5VWJ9 AL451085.2-201ENST00000605085 799 ntBASIC25.03■■□□□ 1.6
SNX30Q5VWJ9 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.03■■□□□ 1.6
SNX30Q5VWJ9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SNX30Q5VWJ9 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
SNX30Q5VWJ9 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
SNX30Q5VWJ9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SNX30Q5VWJ9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
SNX30Q5VWJ9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
SNX30Q5VWJ9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
SNX30Q5VWJ9 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SNX30Q5VWJ9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SNX30Q5VWJ9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SNX30Q5VWJ9 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25■■□□□ 1.59
SNX30Q5VWJ9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SNX30Q5VWJ9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25■■□□□ 1.59
SNX30Q5VWJ9 AC022616.5-201ENST00000518796 181 ntBASIC25■■□□□ 1.59
SNX30Q5VWJ9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25■■□□□ 1.59
SNX30Q5VWJ9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25■■□□□ 1.59
SNX30Q5VWJ9 AC103724.3-201ENST00000564481 992 ntBASIC25■■□□□ 1.59
SNX30Q5VWJ9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25■■□□□ 1.59
SNX30Q5VWJ9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
SNX30Q5VWJ9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25■■□□□ 1.59
SNX30Q5VWJ9 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SNX30Q5VWJ9 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25■■□□□ 1.59
SNX30Q5VWJ9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SNX30Q5VWJ9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.99■■□□□ 1.59
SNX30Q5VWJ9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
SNX30Q5VWJ9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SNX30Q5VWJ9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.98■■□□□ 1.59
SNX30Q5VWJ9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.98■■□□□ 1.59
SNX30Q5VWJ9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
SNX30Q5VWJ9 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.98■■□□□ 1.59
SNX30Q5VWJ9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SNX30Q5VWJ9 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SNX30Q5VWJ9 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SNX30Q5VWJ9 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.98■■□□□ 1.59
SNX30Q5VWJ9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
SNX30Q5VWJ9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
SNX30Q5VWJ9 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.97■■□□□ 1.59
SNX30Q5VWJ9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SNX30Q5VWJ9 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
SNX30Q5VWJ9 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SNX30Q5VWJ9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms