Protein–RNA interactions for Protein: P78509

RELN, Reelin, humanhuman

Predictions only

Length 3,460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RELNP78509 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RELNP78509 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RELNP78509 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.54■■□□□ 1.04
RELNP78509 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RELNP78509 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
RELNP78509 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.54■■□□□ 1.04
RELNP78509 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RELNP78509 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RELNP78509 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RELNP78509 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RELNP78509 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC21.53■■□□□ 1.04
RELNP78509 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RELNP78509 AC120024.1-201ENST00000562672 995 ntBASIC21.53■■□□□ 1.04
RELNP78509 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RELNP78509 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RELNP78509 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RELNP78509 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RELNP78509 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.53■■□□□ 1.04
RELNP78509 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.53■■□□□ 1.04
RELNP78509 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.53■■□□□ 1.04
RELNP78509 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.53■■□□□ 1.04
RELNP78509 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RELNP78509 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RELNP78509 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.52■■□□□ 1.04
RELNP78509 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.52■■□□□ 1.04
RELNP78509 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.52■■□□□ 1.04
RELNP78509 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RELNP78509 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RELNP78509 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.52■■□□□ 1.03
RELNP78509 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RELNP78509 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RELNP78509 AC090192.1-201ENST00000517740 490 ntBASIC21.51■■□□□ 1.03
RELNP78509 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.51■■□□□ 1.03
RELNP78509 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.51■■□□□ 1.03
RELNP78509 AL162430.1-201ENST00000480705 870 ntBASIC21.51■■□□□ 1.03
RELNP78509 AC142381.2-201ENST00000566120 298 ntBASIC21.51■■□□□ 1.03
RELNP78509 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.51■■□□□ 1.03
RELNP78509 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.5■■□□□ 1.03
RELNP78509 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RELNP78509 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RELNP78509 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RELNP78509 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
RELNP78509 AC097381.1-201ENST00000429019 1296 ntBASIC21.5■■□□□ 1.03
RELNP78509 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RELNP78509 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RELNP78509 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RELNP78509 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.49■■□□□ 1.03
RELNP78509 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RELNP78509 AC010997.5-201ENST00000609182 354 ntBASIC21.49■■□□□ 1.03
RELNP78509 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RELNP78509 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.48■■□□□ 1.03
RELNP78509 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.48■■□□□ 1.03
RELNP78509 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.48■■□□□ 1.03
RELNP78509 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.48■■□□□ 1.03
RELNP78509 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RELNP78509 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.48■■□□□ 1.03
RELNP78509 MIR6724-1-201ENST00000616420 92 ntBASIC21.48■■□□□ 1.03
RELNP78509 MIR6724-2-201ENST00000616483 92 ntBASIC21.48■■□□□ 1.03
RELNP78509 MIR6724-4-201ENST00000617390 92 ntBASIC21.48■■□□□ 1.03
RELNP78509 MIR6724-3-201ENST00000622482 92 ntBASIC21.48■■□□□ 1.03
RELNP78509 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
RELNP78509 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
RELNP78509 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
RELNP78509 AL449106.1-201ENST00000608517 1980 ntBASIC21.47■■□□□ 1.03
RELNP78509 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
RELNP78509 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.47■■□□□ 1.03
RELNP78509 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RELNP78509 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RELNP78509 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RELNP78509 AP002414.2-202ENST00000590929 1450 ntBASIC21.47■■□□□ 1.03
RELNP78509 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.46■■□□□ 1.03
RELNP78509 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RELNP78509 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RELNP78509 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.46■■□□□ 1.03
RELNP78509 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.46■■□□□ 1.03
RELNP78509 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RELNP78509 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.46■■□□□ 1.03
RELNP78509 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RELNP78509 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RELNP78509 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RELNP78509 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
RELNP78509 AL355001.2-201ENST00000620617 1191 ntBASIC21.45■■□□□ 1.02
RELNP78509 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RELNP78509 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.45■■□□□ 1.02
RELNP78509 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RELNP78509 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
RELNP78509 BX255925.1-201ENST00000566954 1854 ntBASIC21.44■■□□□ 1.02
RELNP78509 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.44■■□□□ 1.02
RELNP78509 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.44■■□□□ 1.02
RELNP78509 MIR4281-201ENST00000580852 62 ntBASIC21.44■■□□□ 1.02
RELNP78509 AC087623.3-201ENST00000607047 1098 ntBASIC21.44■■□□□ 1.02
RELNP78509 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RELNP78509 PBX2P1-201ENST00000493219 1291 ntBASIC21.43■■□□□ 1.02
RELNP78509 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RELNP78509 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.43■■□□□ 1.02
RELNP78509 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.43■■□□□ 1.02
RELNP78509 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RELNP78509 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.43■■□□□ 1.02
RELNP78509 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.43■■□□□ 1.02
RELNP78509 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms