Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.05■□□□□ 0.8
SPDEFO95238 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPDEFO95238 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SPDEFO95238 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPDEFO95238 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPDEFO95238 ABHD17AP4-201ENST00000411545 909 ntBASIC20.04■□□□□ 0.8
SPDEFO95238 AC008813.1-201ENST00000536597 885 ntBASIC20.04■□□□□ 0.8
SPDEFO95238 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.04■□□□□ 0.8
SPDEFO95238 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPDEFO95238 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SPDEFO95238 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPDEFO95238 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPDEFO95238 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPDEFO95238 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPDEFO95238 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SPDEFO95238 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
SPDEFO95238 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPDEFO95238 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPDEFO95238 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.03■□□□□ 0.8
SPDEFO95238 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPDEFO95238 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPDEFO95238 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
SPDEFO95238 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPDEFO95238 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SPDEFO95238 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPDEFO95238 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPDEFO95238 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.02■□□□□ 0.8
SPDEFO95238 AC022211.4-201ENST00000625094 2161 ntBASIC20.02■□□□□ 0.8
SPDEFO95238 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SPDEFO95238 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SPDEFO95238 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPDEFO95238 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPDEFO95238 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPDEFO95238 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPDEFO95238 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPDEFO95238 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SPDEFO95238 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPDEFO95238 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SPDEFO95238 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.01■□□□□ 0.79
SPDEFO95238 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SPDEFO95238 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SPDEFO95238 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SPDEFO95238 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20■□□□□ 0.79
SPDEFO95238 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
SPDEFO95238 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.99■□□□□ 0.79
SPDEFO95238 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SPDEFO95238 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPDEFO95238 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.99■□□□□ 0.79
SPDEFO95238 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPDEFO95238 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.99■□□□□ 0.79
SPDEFO95238 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SPDEFO95238 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SPDEFO95238 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPDEFO95238 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.99■□□□□ 0.79
SPDEFO95238 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SPDEFO95238 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SPDEFO95238 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPDEFO95238 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPDEFO95238 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPDEFO95238 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SPDEFO95238 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPDEFO95238 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.98■□□□□ 0.79
SPDEFO95238 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPDEFO95238 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPDEFO95238 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPDEFO95238 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.97■□□□□ 0.79
SPDEFO95238 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SPDEFO95238 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.97■□□□□ 0.79
SPDEFO95238 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.97■□□□□ 0.79
SPDEFO95238 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.97■□□□□ 0.79
SPDEFO95238 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPDEFO95238 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPDEFO95238 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SPDEFO95238 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.96■□□□□ 0.79
SPDEFO95238 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SPDEFO95238 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.96■□□□□ 0.79
SPDEFO95238 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPDEFO95238 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPDEFO95238 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SPDEFO95238 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.95■□□□□ 0.78
SPDEFO95238 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPDEFO95238 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SPDEFO95238 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPDEFO95238 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPDEFO95238 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPDEFO95238 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPDEFO95238 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SPDEFO95238 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SPDEFO95238 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPDEFO95238 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPDEFO95238 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPDEFO95238 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPDEFO95238 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SPDEFO95238 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SPDEFO95238 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPDEFO95238 AC148477.6-201ENST00000623746 465 ntBASIC19.94■□□□□ 0.78
SPDEFO95238 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SPDEFO95238 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPDEFO95238 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPDEFO95238 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms