Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC28.44■■■□□ 2.14
SSC5DA1L4H1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC28.44■■■□□ 2.14
SSC5DA1L4H1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
SSC5DA1L4H1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SSC5DA1L4H1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC28.43■■■□□ 2.14
SSC5DA1L4H1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
SSC5DA1L4H1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC28.43■■■□□ 2.14
SSC5DA1L4H1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC28.43■■■□□ 2.14
SSC5DA1L4H1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC28.43■■■□□ 2.14
SSC5DA1L4H1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SSC5DA1L4H1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
SSC5DA1L4H1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
SSC5DA1L4H1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
SSC5DA1L4H1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC28.42■■■□□ 2.14
SSC5DA1L4H1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
SSC5DA1L4H1 BX255925.1-201ENST00000566954 1854 ntBASIC28.42■■■□□ 2.14
SSC5DA1L4H1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SSC5DA1L4H1 SRR-208ENST00000576848 588 ntTSL 4 BASIC28.41■■■□□ 2.14
SSC5DA1L4H1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SSC5DA1L4H1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
SSC5DA1L4H1 AC110285.6-201ENST00000617652 491 ntBASIC28.41■■■□□ 2.14
SSC5DA1L4H1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SSC5DA1L4H1 LINC01003-201ENST00000564834 1764 ntBASIC28.41■■■□□ 2.14
SSC5DA1L4H1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SSC5DA1L4H1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC28.4■■■□□ 2.14
SSC5DA1L4H1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC28.4■■■□□ 2.14
SSC5DA1L4H1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC28.39■■■□□ 2.14
SSC5DA1L4H1 AL136116.3-201ENST00000402907 1138 ntBASIC28.39■■■□□ 2.14
SSC5DA1L4H1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SSC5DA1L4H1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC28.39■■■□□ 2.14
SSC5DA1L4H1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SSC5DA1L4H1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
SSC5DA1L4H1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
SSC5DA1L4H1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
SSC5DA1L4H1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SSC5DA1L4H1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SSC5DA1L4H1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
SSC5DA1L4H1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
SSC5DA1L4H1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC28.37■■■□□ 2.13
SSC5DA1L4H1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.37■■■□□ 2.13
SSC5DA1L4H1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
SSC5DA1L4H1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC28.37■■■□□ 2.13
SSC5DA1L4H1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC28.37■■■□□ 2.13
SSC5DA1L4H1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC28.36■■■□□ 2.13
SSC5DA1L4H1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC28.36■■■□□ 2.13
SSC5DA1L4H1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC28.36■■■□□ 2.13
SSC5DA1L4H1 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SSC5DA1L4H1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SSC5DA1L4H1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
SSC5DA1L4H1 AC142472.1-201ENST00000612013 1741 ntBASIC28.35■■■□□ 2.13
SSC5DA1L4H1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SSC5DA1L4H1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
SSC5DA1L4H1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SSC5DA1L4H1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC28.34■■■□□ 2.13
SSC5DA1L4H1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC28.34■■■□□ 2.13
SSC5DA1L4H1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC28.34■■■□□ 2.13
SSC5DA1L4H1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC28.34■■■□□ 2.13
SSC5DA1L4H1 MIR3621-201ENST00000580529 85 ntBASIC28.34■■■□□ 2.13
SSC5DA1L4H1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SSC5DA1L4H1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
SSC5DA1L4H1 MIR4466-201ENST00000606121 54 ntBASIC28.33■■■□□ 2.13
SSC5DA1L4H1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
SSC5DA1L4H1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SSC5DA1L4H1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.33■■■□□ 2.13
SSC5DA1L4H1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
SSC5DA1L4H1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SSC5DA1L4H1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC28.33■■■□□ 2.12
SSC5DA1L4H1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SSC5DA1L4H1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
SSC5DA1L4H1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC28.32■■■□□ 2.12
SSC5DA1L4H1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC28.32■■■□□ 2.12
SSC5DA1L4H1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC28.32■■■□□ 2.12
SSC5DA1L4H1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SSC5DA1L4H1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
SSC5DA1L4H1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC28.32■■■□□ 2.12
SSC5DA1L4H1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SSC5DA1L4H1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SSC5DA1L4H1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC28.31■■■□□ 2.12
SSC5DA1L4H1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC28.3■■■□□ 2.12
SSC5DA1L4H1 AC010997.5-201ENST00000609182 354 ntBASIC28.3■■■□□ 2.12
SSC5DA1L4H1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SSC5DA1L4H1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SSC5DA1L4H1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
SSC5DA1L4H1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC28.29■■■□□ 2.12
SSC5DA1L4H1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SSC5DA1L4H1 AL512631.2-201ENST00000604634 923 ntBASIC28.29■■■□□ 2.12
SSC5DA1L4H1 MIR6724-1-201ENST00000616420 92 ntBASIC28.29■■■□□ 2.12
SSC5DA1L4H1 MIR6724-2-201ENST00000616483 92 ntBASIC28.29■■■□□ 2.12
SSC5DA1L4H1 MIR6724-4-201ENST00000617390 92 ntBASIC28.29■■■□□ 2.12
SSC5DA1L4H1 MIR6724-3-201ENST00000622482 92 ntBASIC28.29■■■□□ 2.12
SSC5DA1L4H1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SSC5DA1L4H1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC28.28■■■□□ 2.12
SSC5DA1L4H1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC28.28■■■□□ 2.12
SSC5DA1L4H1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC28.28■■■□□ 2.12
SSC5DA1L4H1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SSC5DA1L4H1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC28.28■■■□□ 2.12
SSC5DA1L4H1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SSC5DA1L4H1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC28.27■■■□□ 2.12
SSC5DA1L4H1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC28.27■■■□□ 2.12
SSC5DA1L4H1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms