Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 ZNF691-204ENST00000372506 1859 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.48e-6■□□□□ 8.9
MATR3P43243 PAPD4-207ENST00000504233 2997 ntTSL 1 (best) BASIC12.5□□□□□ -0.418e-6■□□□□ 8.9
MATR3P43243 ACTN1-216ENST00000556083 4674 ntTSL 1 (best)12.4□□□□□ -0.438e-6■□□□□ 8.9
MATR3P43243 ZSCAN16-AS1-202ENST00000602810 1536 ntTSL 1 (best)12.22□□□□□ -0.458e-6■□□□□ 8.9
MATR3P43243 PRKD3-203ENST00000443187 695 ntTSL 412.21□□□□□ -0.458e-6■□□□□ 8.9
MATR3P43243 DPP4-207ENST00000490286 2241 ntTSL 511.99□□□□□ -0.494e-8■□□□□ 8.9
MATR3P43243 ZNF691-203ENST00000372504 1935 ntTSL 5 BASIC11.83□□□□□ -0.528e-6■□□□□ 8.9
MATR3P43243 AC092944.1-203ENST00000488040 567 ntTSL 4 BASIC11.75□□□□□ -0.538e-6■□□□□ 8.9
MATR3P43243 TBC1D14-202ENST00000410031 4201 ntTSL 5 BASIC11.7□□□□□ -0.548e-6■□□□□ 8.9
MATR3P43243 TBC1D14-207ENST00000448507 4887 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.558e-6■□□□□ 8.9
MATR3P43243 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.562e-7■□□□□ 8.9
MATR3P43243 COG7-205ENST00000567821 922 ntTSL 511.46□□□□□ -0.578e-6■□□□□ 8.9
MATR3P43243 PAPD4-201ENST00000296783 3129 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.588e-6■□□□□ 8.9
MATR3P43243 DPP4-210ENST00000497461 781 ntTSL 1 (best)11.4□□□□□ -0.584e-8■□□□□ 8.9
MATR3P43243 ZNF691-205ENST00000372507 1683 ntAPPRIS P3 TSL 3 BASIC11.37□□□□□ -0.598e-6■□□□□ 8.9
MATR3P43243 TBC1D14-206ENST00000446947 4021 ntTSL 5 BASIC11.35□□□□□ -0.598e-6■□□□□ 8.9
MATR3P43243 NFIA-203ENST00000371185 1714 ntTSL 5 BASIC11.25□□□□□ -0.618e-6■□□□□ 8.9
MATR3P43243 AC092944.1-201ENST00000460796 542 ntTSL 310.85□□□□□ -0.678e-6■□□□□ 8.9
MATR3P43243 AC106869.1-204ENST00000450550 393 ntTSL 510.73□□□□□ -0.692e-9■□□□□ 8.9
MATR3P43243 PAPD4-202ENST00000423041 3223 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.778e-6■□□□□ 8.9
MATR3P43243 NFIA-206ENST00000371191 1916 ntTSL 5 BASIC9.85□□□□□ -0.838e-6■□□□□ 8.9
MATR3P43243 PAPD4-204ENST00000453514 3523 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.858e-6■□□□□ 8.9
MATR3P43243 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.872e-7■□□□□ 8.9
MATR3P43243 NFIA-212ENST00000485903 1674 ntTSL 5 BASIC9.57□□□□□ -0.888e-6■□□□□ 8.9
MATR3P43243 VRK1-206ENST00000557222 1029 ntTSL 59.38□□□□□ -0.918e-6■□□□□ 8.9
MATR3P43243 AC106869.1-203ENST00000419035 1892 ntTSL 2 BASIC9.23□□□□□ -0.932e-9■□□□□ 8.9
MATR3P43243 NFIA-208ENST00000407417 2123 ntTSL 2 BASIC9.11□□□□□ -0.958e-6■□□□□ 8.9
MATR3P43243 PON2-210ENST00000478801 555 ntTSL 49.03□□□□□ -0.968e-6■□□□□ 8.9
MATR3P43243 ZNF37A-203ENST00000477790 685 ntTSL 28.85□□□□□ -0.992e-7■□□□□ 8.9
MATR3P43243 CASC9-204ENST00000523313 557 ntTSL 28.84□□□□□ -0.998e-6■□□□□ 8.9
MATR3P43243 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.022e-7■□□□□ 8.9
MATR3P43243 ARMC8-202ENST00000460495 2189 ntTSL 28.44□□□□□ -1.062e-7■□□□□ 8.9
MATR3P43243 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC8.16□□□□□ -1.12e-9■□□□□ 8.9
MATR3P43243 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.2□□□□□ -1.268e-6■□□□□ 8.9
MATR3P43243 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.67□□□□□ -1.348e-6■□□□□ 8.9
MATR3P43243 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.9□□□□□ -1.468e-6■□□□□ 8.9
MATR3P43243 PRKD3-210ENST00000494667 4326 ntTSL 1 (best)5.18□□□□□ -1.588e-6■□□□□ 8.9
MATR3P43243 VRK1-203ENST00000555067 604 ntTSL 35.15□□□□□ -1.598e-6■□□□□ 8.9
MATR3P43243 NFIA-209ENST00000476646 730 ntTSL 35.12□□□□□ -1.598e-6■□□□□ 8.9
MATR3P43243 ORMDL1-205ENST00000442547 893 ntTSL 54.94□□□□□ -1.622e-7■□□□□ 8.9
MATR3P43243 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.628e-6■□□□□ 8.9
MATR3P43243 PON2-216ENST00000632034 570 ntTSL 24.68□□□□□ -1.668e-6■□□□□ 8.9
MATR3P43243 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.682e-7■□□□□ 8.9
MATR3P43243 PON2-206ENST00000460873 569 ntTSL 44.38□□□□□ -1.718e-6■□□□□ 8.9
MATR3P43243 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.758e-6■□□□□ 8.9
MATR3P43243 ABCD3-206ENST00000493416 623 ntTSL 53.71□□□□□ -1.828e-6■□□□□ 8.9
MATR3P43243 PON2-203ENST00000446142 1099 ntTSL 1 (best)3.69□□□□□ -1.828e-6■□□□□ 8.9
MATR3P43243 PRKD3-206ENST00000464552 436 ntTSL 23.66□□□□□ -1.828e-6■□□□□ 8.9
MATR3P43243 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.028e-6■□□□□ 8.9
MATR3P43243 DPP4-205ENST00000461836 672 ntTSL 1 (best)2.14□□□□□ -2.074e-8■□□□□ 8.9
MATR3P43243 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.04■□□□□ 0.85e-8■□□□□ 8.9
MATR3P43243 LRP1-207ENST00000554174 2175 ntTSL 1 (best) BASIC13.38□□□□□ -0.275e-8■□□□□ 8.9
MATR3P43243 LRP1-202ENST00000338962 2169 ntTSL 1 (best) BASIC11.94□□□□□ -0.55e-8■□□□□ 8.9
MATR3P43243 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.765e-8■□□□□ 8.9
MATR3P43243 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.12e-8■□□□□ 8.9
MATR3P43243 ZNF331-204ENST00000502248 670 ntTSL 1 (best)11.86□□□□□ -0.512e-8■□□□□ 8.9
MATR3P43243 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.962e-8■□□□□ 8.9
MATR3P43243 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.45■□□□□ 0.541e-7■□□□□ 8.9
MATR3P43243 EHD2-204ENST00000596225 538 ntTSL 217.36■□□□□ 0.371e-7■□□□□ 8.9
MATR3P43243 EHD2-201ENST00000263277 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.331e-7■□□□□ 8.9
MATR3P43243 EHD2-205ENST00000602215 234 ntTSL 38.85□□□□□ -0.991e-7■□□□□ 8.9
MATR3P43243 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC7.57□□□□□ -1.21e-7■□□□□ 8.9
MATR3P43243 NEDD9-201ENST00000379433 3341 ntTSL 1 (best) BASIC11.85□□□□□ -0.514e-6■□□□□ 8.9
MATR3P43243 NEDD9-204ENST00000448183 4934 ntTSL 1 (best)8.96□□□□□ -0.984e-6■□□□□ 8.9
MATR3P43243 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.024e-6■□□□□ 8.9
MATR3P43243 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.86□□□□□ -1.154e-6■□□□□ 8.9
MATR3P43243 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.164e-6■□□□□ 8.9
MATR3P43243 AL583852.1-201ENST00000635018 572 ntTSL 4 BASIC9.22□□□□□ -0.932e-9■□□□□ 8.8
MATR3P43243 ACSS3-202ENST00000546664 379 ntTSL 54.36□□□□□ -1.712e-9■□□□□ 8.8
MATR3P43243 RALGAPA2-202ENST00000424981 628 ntTSL 33.86□□□□□ -1.792e-9■□□□□ 8.8
MATR3P43243 FMR1-216ENST00000616614 1409 ntTSL 534.81■■■■□ 3.166e-8■□□□□ 8.7
MATR3P43243 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.13■■■□□ 2.416e-8■□□□□ 8.7
MATR3P43243 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.446e-8■□□□□ 8.7
MATR3P43243 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC23.79■■□□□ 1.46e-8■□□□□ 8.7
MATR3P43243 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.24■■□□□ 1.316e-8■□□□□ 8.7
MATR3P43243 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.77■■□□□ 1.086e-8■□□□□ 8.7
MATR3P43243 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.85■□□□□ 0.936e-8■□□□□ 8.7
MATR3P43243 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.19■□□□□ 0.826e-8■□□□□ 8.7
MATR3P43243 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.786e-8■□□□□ 8.7
MATR3P43243 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.88■□□□□ 0.296e-8■□□□□ 8.7
MATR3P43243 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC15.27■□□□□ 0.036e-8■□□□□ 8.7
MATR3P43243 FMR1-220ENST00000621987 1352 ntTSL 5 BASIC13.98□□□□□ -0.176e-8■□□□□ 8.7
MATR3P43243 FMR1-213ENST00000495717 776 ntTSL 513.03□□□□□ -0.326e-8■□□□□ 8.7
MATR3P43243 ATP2A2-203ENST00000377685 5702 ntTSL 525.32■■□□□ 1.646e-6■□□□□ 8.7
MATR3P43243 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.936e-6■□□□□ 8.7
MATR3P43243 PPIL2-207ENST00000462188 1735 ntTSL 217.91■□□□□ 0.466e-6■□□□□ 8.7
MATR3P43243 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.456e-6■□□□□ 8.7
MATR3P43243 PPIL2-205ENST00000446951 1926 ntTSL 1 (best)16.46■□□□□ 0.236e-6■□□□□ 8.7
MATR3P43243 ATP2A2-207ENST00000548169 2951 ntTSL 29.35□□□□□ -0.916e-6■□□□□ 8.7
MATR3P43243 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.026e-6■□□□□ 8.7
MATR3P43243 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.046e-6■□□□□ 8.7
MATR3P43243 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.046e-6■□□□□ 8.7
MATR3P43243 ATP2A2-209ENST00000550248 544 ntTSL 48.27□□□□□ -1.096e-6■□□□□ 8.7
MATR3P43243 POLA1-203ENST00000480125 580 ntTSL 35.13□□□□□ -1.596e-6■□□□□ 8.7
MATR3P43243 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.83■■□□□ 1.243e-7■□□□□ 8.7
MATR3P43243 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.81■□□□□ 0.923e-7■□□□□ 8.7
MATR3P43243 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.333e-7■□□□□ 8.7
MATR3P43243 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.11■□□□□ 0.333e-7■□□□□ 8.7
MATR3P43243 DDI2-201ENST00000320153 2076 ntTSL 213.31□□□□□ -0.285e-6■□□□□ 8.7
MATR3P43243 ZNF700-203ENST00000622593 2901 ntAPPRIS ALT2 TSL 4 BASIC11.9□□□□□ -0.513e-7■□□□□ 8.7
Retrieved 100 of 16,209 protein–RNA pairs in 267.2 ms