RNA–Protein interactions for RNA: ENST00000439526.6

FMR1-207, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 3,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-207ENST00000439526 NISCHQ9Y2I1 1504 aa39.36■■■■□ 3.89
FMR1-207ENST00000439526 DCAF8L2P0C7V8 631 aa34.9■■■■□ 3.18
FMR1-207ENST00000439526 SHROOM4Q9ULL8 1493 aa34.4■■■■□ 3.1
FMR1-207ENST00000439526 SUPT5HO00267 1087 aaKnown RBP33.59■■■□□ 2.97
FMR1-207ENST00000439526 CCDC180Q9P1Z9 1646 aa33.22■■■□□ 2.91
FMR1-207ENST00000439526 ZCCHC6Q5VYS8 1495 aaKnown RBP32.96■■■□□ 2.87
FMR1-207ENST00000439526 ABCC9O60706 1549 aa32.78■■■□□ 2.84
FMR1-207ENST00000439526 SCRIBQ14160 1630 aa31.93■■■□□ 2.7
FMR1-207ENST00000439526 DCAF1Q9Y4B6 1507 aa31.74■■■□□ 2.67
FMR1-207ENST00000439526 PABPN1Q86U42 306 aaKnown RBP eCLIP31.63■■■□□ 2.65
FMR1-207ENST00000439526 CHIC1Q5VXU3 224 aa31.53■■■□□ 2.64
FMR1-207ENST00000439526 EHMT2Q96KQ7 1210 aa31.49■■■□□ 2.63
FMR1-207ENST00000439526 NACADO15069 1562 aa31.31■■■□□ 2.6
FMR1-207ENST00000439526 FAM9AQ8IZU1 332 aaPredicted RBP31.29■■■□□ 2.6
FMR1-207ENST00000439526 RB1CC1Q8TDY2 1594 aa31.16■■■□□ 2.58
FMR1-207ENST00000439526 TRIM41Q8WV44 630 aa31.08■■■□□ 2.57
FMR1-207ENST00000439526 RSF1Q96T23 1441 aaPredicted RBP31.08■■■□□ 2.57
FMR1-207ENST00000439526 CECR2Q9BXF3 1484 aa31.08■■■□□ 2.57
FMR1-207ENST00000439526 MYO15BQ96JP2 1530 aa31.01■■■□□ 2.55
FMR1-207ENST00000439526 LOC105371045A0A1W2PR82 267 aa31■■■□□ 2.55
FMR1-207ENST00000439526 MROH2BQ7Z745 1585 aa30.71■■■□□ 2.51
FMR1-207ENST00000439526 WIZO95785 1651 aa30.43■■■□□ 2.46
FMR1-207ENST00000439526 PCGF6Q9BYE7 350 aa30.41■■■□□ 2.46
FMR1-207ENST00000439526 BAZ1AQ9NRL2 1556 aaPredicted RBP30.34■■■□□ 2.45
FMR1-207ENST00000439526 TTBK1Q5TCY1 1321 aaPredicted RBP30.18■■■□□ 2.42
FMR1-207ENST00000439526 PPARGC1BQ86YN6 1023 aaKnown RBP30.18■■■□□ 2.42
FMR1-207ENST00000439526 RANGAP1P46060 587 aaPredicted RBP30.14■■■□□ 2.42
FMR1-207ENST00000439526 UNC13AQ9UPW8 1703 aa30.03■■■□□ 2.4
FMR1-207ENST00000439526 SMARCA4P51532 1647 aa30.03■■■□□ 2.4
FMR1-207ENST00000439526 UBTFP17480 764 aaKnown RBP30■■■□□ 2.39
FMR1-207ENST00000439526 CCDC88BA6NC98 1476 aa29.97■■■□□ 2.39
FMR1-207ENST00000439526 BICRAQ9NZM4 1560 aa29.96■■■□□ 2.39
FMR1-207ENST00000439526 BAZ1BQ9UIG0 1483 aaKnown RBP29.83■■■□□ 2.37
FMR1-207ENST00000439526 TOP2AP11388 1531 aaKnown RBP29.8■■■□□ 2.36
FMR1-207ENST00000439526 ABCC8Q09428 1581 aa29.79■■■□□ 2.36
FMR1-207ENST00000439526 ATAD2BQ9ULI0 1458 aa29.7■■■□□ 2.34
FMR1-207ENST00000439526 SMARCA2P51531 1590 aa29.6■■■□□ 2.33
FMR1-207ENST00000439526 CSRNP3Q8WYN3 585 aa29.57■■■□□ 2.32
FMR1-207ENST00000439526 TRIM26Q12899 539 aaPredicted RBP29.54■■■□□ 2.32
FMR1-207ENST00000439526 SOGA1O94964 1423 aa29.5■■■□□ 2.31
FMR1-207ENST00000439526 WRNQ14191 1432 aaPredicted RBP eCLIP29.47■■■□□ 2.31
FMR1-207ENST00000439526 EIF4G1Q04637 1599 aaKnown RBP29.36■■■□□ 2.29
FMR1-207ENST00000439526 RUSC2Q8N2Y8 1516 aa29.3■■■□□ 2.28
FMR1-207ENST00000439526 APLP2Q06481 763 aa29.3■■■□□ 2.28
FMR1-207ENST00000439526 HRCP23327 699 aa29.28■■■□□ 2.28
FMR1-207ENST00000439526 ATP1B4Q9UN42 357 aaPredicted RBP29.13■■■□□ 2.25
FMR1-207ENST00000439526 NCAPD3P42695 1498 aa29.1■■■□□ 2.25
FMR1-207ENST00000439526 DNAJC5BQ9UF47 199 aa29.05■■■□□ 2.24
FMR1-207ENST00000439526 PEG3Q9GZU2 1588 aa29.03■■■□□ 2.24
FMR1-207ENST00000439526 CEP162Q5TB80 1403 aa29■■■□□ 2.23
FMR1-207ENST00000439526 CCER1Q8TC90 406 aaPredicted RBP28.96■■■□□ 2.23
FMR1-207ENST00000439526 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.95■■■□□ 2.23
FMR1-207ENST00000439526 SYNJ1O43426 1573 aa28.92■■■□□ 2.22
FMR1-207ENST00000439526 HNRNPUL2Q1KMD3 747 aaKnown RBP28.91■■■□□ 2.22
FMR1-207ENST00000439526 EEA1Q15075 1411 aa28.89■■■□□ 2.22
FMR1-207ENST00000439526 CC2D2AQ9P2K1 1620 aa28.89■■■□□ 2.22
FMR1-207ENST00000439526 P3H3Q8IVL6 736 aa28.89■■■□□ 2.21
FMR1-207ENST00000439526 CADPSQ9ULU8 1353 aa28.88■■■□□ 2.21
FMR1-207ENST00000439526 GOLGA3Q08378 1498 aa28.87■■■□□ 2.21
FMR1-207ENST00000439526 TNIKQ9UKE5 1360 aa28.84■■■□□ 2.21
FMR1-207ENST00000439526 HMGXB3Q12766 1538 aa28.79■■■□□ 2.2
FMR1-207ENST00000439526 CLIP1P30622 1438 aa28.76■■■□□ 2.2
FMR1-207ENST00000439526 CEP164Q9UPV0 1460 aa28.74■■■□□ 2.19
FMR1-207ENST00000439526 ITGAEP38570 1179 aa28.73■■■□□ 2.19
FMR1-207ENST00000439526 NESP48681 1621 aa28.72■■■□□ 2.19
FMR1-207ENST00000439526 RAPGEF2Q9Y4G8 1499 aa28.71■■■□□ 2.19
FMR1-207ENST00000439526 KIF27Q86VH2 1401 aa28.7■■■□□ 2.19
FMR1-207ENST00000439526 CFTRP13569 1480 aa28.7■■■□□ 2.18
FMR1-207ENST00000439526 CUX2O14529 1486 aa28.68■■■□□ 2.18
FMR1-207ENST00000439526 FANCD2Q9BXW9 1451 aa28.58■■■□□ 2.17
FMR1-207ENST00000439526 CUX1P39880 1505 aa28.57■■■□□ 2.16
FMR1-207ENST00000439526 ZEB1P37275 1124 aaPredicted RBP28.54■■■□□ 2.16
FMR1-207ENST00000439526 TOP2BQ02880 1626 aa28.47■■■□□ 2.15
FMR1-207ENST00000439526 TDRD9Q8NDG6 1382 aaKnown RBP28.47■■■□□ 2.15
FMR1-207ENST00000439526 FBLN2P98095 1184 aa28.45■■■□□ 2.14
FMR1-207ENST00000439526 FGD5Q6ZNL6 1462 aa28.44■■■□□ 2.14
FMR1-207ENST00000439526 ARID3CA6NKF2 412 aa28.44■■■□□ 2.14
FMR1-207ENST00000439526 RAD54L2Q9Y4B4 1467 aa28.44■■■□□ 2.14
FMR1-207ENST00000439526 CARMIL1Q5VZK9 1371 aa28.44■■■□□ 2.14
FMR1-207ENST00000439526 IGF1RP08069 1367 aa28.33■■■□□ 2.13
FMR1-207ENST00000439526 PDS5BQ9NTI5 1447 aa28.31■■■□□ 2.12
FMR1-207ENST00000439526 KANK4Q5T7N3 995 aaPredicted RBP28.29■■■□□ 2.12
FMR1-207ENST00000439526 FAM50AQ14320 339 aaKnown RBP28.27■■■□□ 2.12
FMR1-207ENST00000439526 VPS8Q8N3P4 1428 aa28.26■■■□□ 2.11
FMR1-207ENST00000439526 KIF21BO75037 1637 aa28.17■■■□□ 2.1
FMR1-207ENST00000439526 PRXQ9BXM0 1461 aa28.16■■■□□ 2.1
FMR1-207ENST00000439526 ERCC6Q03468 1493 aa28.14■■■□□ 2.1
FMR1-207ENST00000439526 TOPBP1Q92547 1522 aa28.13■■■□□ 2.09
FMR1-207ENST00000439526 BIVM-ERCC5R4GMW8 1640 aa28.13■■■□□ 2.09
FMR1-207ENST00000439526 POLA1P09884 1462 aaPredicted RBP28.12■■■□□ 2.09
FMR1-207ENST00000439526 ARAP1Q96P48 1450 aa28■■■□□ 2.07
FMR1-207ENST00000439526 URB2Q14146 1524 aaKnown RBP27.97■■■□□ 2.07
FMR1-207ENST00000439526 FHOD3Q2V2M9 1422 aa27.97■■■□□ 2.07
FMR1-207ENST00000439526 AQRO60306 1485 aaKnown RBP eCLIP27.96■■■□□ 2.077e-6■■□□□ 12.2
FMR1-207ENST00000439526 CHMP7Q8WUX9 453 aaPredicted RBP27.96■■■□□ 2.07
FMR1-207ENST00000439526 DNMBPQ6XZF7 1577 aa27.93■■■□□ 2.06
FMR1-207ENST00000439526 ERICH3Q5RHP9 1530 aa27.91■■■□□ 2.06
FMR1-207ENST00000439526 GAPVD1Q14C86 1478 aa27.9■■■□□ 2.06
FMR1-207ENST00000439526 LAMC3Q9Y6N6 1575 aa27.89■■■□□ 2.06
FMR1-207ENST00000439526 ARHGAP35Q9NRY4 1499 aa27.89■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms