RNA–Protein interactions for RNA: ENST00000523313.1

CASC9-204, Transcript of cancer susceptibility 9, humanhuman

TSL 2

Gene CASC9, Length 557 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-204ENST00000523313 NISCHQ9Y2I1 1504 aa21.72■■□□□ 1.07
CASC9-204ENST00000523313 ABCC9O60706 1549 aa20.58■□□□□ 0.89
CASC9-204ENST00000523313 DNAJC5BQ9UF47 199 aa20.01■□□□□ 0.79
CASC9-204ENST00000523313 CCDC180Q9P1Z9 1646 aa19.74■□□□□ 0.75
CASC9-204ENST00000523313 RB1CC1Q8TDY2 1594 aa19.18■□□□□ 0.66
CASC9-204ENST00000523313 PABPN1Q86U42 306 aaKnown RBP eCLIP19.08■□□□□ 0.64
CASC9-204ENST00000523313 NACADO15069 1562 aa18.86■□□□□ 0.61
CASC9-204ENST00000523313 DNAJC5Q9H3Z4 198 aa18.84■□□□□ 0.61
CASC9-204ENST00000523313 UNC13AQ9UPW8 1703 aa18.74■□□□□ 0.59
CASC9-204ENST00000523313 DCAF8L2P0C7V8 631 aa18.72■□□□□ 0.59
CASC9-204ENST00000523313 BICRAQ9NZM4 1560 aa18.71■□□□□ 0.59
CASC9-204ENST00000523313 CECR2Q9BXF3 1484 aa18.58■□□□□ 0.57
CASC9-204ENST00000523313 CC2D2AQ9P2K1 1620 aa18.51■□□□□ 0.55
CASC9-204ENST00000523313 MYO15BQ96JP2 1530 aa18.33■□□□□ 0.53
CASC9-204ENST00000523313 EIF4G1Q04637 1599 aaKnown RBP18.29■□□□□ 0.52
CASC9-204ENST00000523313 SHROOM4Q9ULL8 1493 aa18.27■□□□□ 0.52
CASC9-204ENST00000523313 AEBP2Q6ZN18 517 aaPredicted RBP18.21■□□□□ 0.51
CASC9-204ENST00000523313 SCRIBQ14160 1630 aa18.03■□□□□ 0.48
CASC9-204ENST00000523313 CUX2O14529 1486 aa17.97■□□□□ 0.47
CASC9-204ENST00000523313 ZCCHC6Q5VYS8 1495 aaKnown RBP17.85■□□□□ 0.45
CASC9-204ENST00000523313 DCAF1Q9Y4B6 1507 aa17.84■□□□□ 0.45
CASC9-204ENST00000523313 ERCC6Q03468 1493 aa17.78■□□□□ 0.44
CASC9-204ENST00000523313 TRIM41Q8WV44 630 aa17.76■□□□□ 0.43
CASC9-204ENST00000523313 NESP48681 1621 aa17.48■□□□□ 0.39
CASC9-204ENST00000523313 NCAPD3P42695 1498 aa17.45■□□□□ 0.38
CASC9-204ENST00000523313 THOC2Q8NI27 1593 aaKnown RBP17.4■□□□□ 0.38
CASC9-204ENST00000523313 ATAD2BQ9ULI0 1458 aa17.32■□□□□ 0.36
CASC9-204ENST00000523313 SMARCA2P51531 1590 aa17.28■□□□□ 0.36
CASC9-204ENST00000523313 CHIC1Q5VXU3 224 aa17.26■□□□□ 0.35
CASC9-204ENST00000523313 HMGXB3Q12766 1538 aa17.23■□□□□ 0.35
CASC9-204ENST00000523313 KIF21AQ7Z4S6 1674 aa17.16■□□□□ 0.34
CASC9-204ENST00000523313 LAMC3Q9Y6N6 1575 aa17.15■□□□□ 0.34
CASC9-204ENST00000523313 BAZ1BQ9UIG0 1483 aaKnown RBP17.1■□□□□ 0.33
CASC9-204ENST00000523313 SMARCA4P51532 1647 aa17.1■□□□□ 0.33
CASC9-204ENST00000523313 PDS5BQ9NTI5 1447 aa17.09■□□□□ 0.33
CASC9-204ENST00000523313 BAZ1AQ9NRL2 1556 aaPredicted RBP17.08■□□□□ 0.32
CASC9-204ENST00000523313 OSCARQ8IYS5 282 aa17.05■□□□□ 0.32
CASC9-204ENST00000523313 MRC2Q9UBG0 1479 aa17.01■□□□□ 0.31
CASC9-204ENST00000523313 WDR62O43379 1518 aa16.98■□□□□ 0.31
CASC9-204ENST00000523313 RIMBP3CA6NJZ7 1639 aa16.92■□□□□ 0.3
CASC9-204ENST00000523313 RIMBP3BA6NNM3 1639 aa16.92■□□□□ 0.3
CASC9-204ENST00000523313 RIMBP3Q9UFD9 1639 aa16.92■□□□□ 0.3
CASC9-204ENST00000523313 CADPSQ9ULU8 1353 aa16.9■□□□□ 0.3
CASC9-204ENST00000523313 PEG3Q9GZU2 1588 aa16.9■□□□□ 0.3
CASC9-204ENST00000523313 CEP164Q9UPV0 1460 aa16.8■□□□□ 0.28
CASC9-204ENST00000523313 TRHP20396 242 aaPredicted RBP16.79■□□□□ 0.28
CASC9-204ENST00000523313 ARHGEF11O15085 1522 aa16.79■□□□□ 0.28
CASC9-204ENST00000523313 MROH2BQ7Z745 1585 aa16.77■□□□□ 0.28
CASC9-204ENST00000523313 CYB5RLQ6IPT4 315 aa16.75■□□□□ 0.27
CASC9-204ENST00000523313 FANCD2Q9BXW9 1451 aa16.72■□□□□ 0.27
CASC9-204ENST00000523313 URB2Q14146 1524 aaKnown RBP16.65■□□□□ 0.26
CASC9-204ENST00000523313 ARAP1Q96P48 1450 aa16.6■□□□□ 0.25
CASC9-204ENST00000523313 ZNF608Q9ULD9 1512 aaPredicted RBP16.59■□□□□ 0.25
CASC9-204ENST00000523313 CFTRP13569 1480 aa16.54■□□□□ 0.24
CASC9-204ENST00000523313 WIZO95785 1651 aa16.51■□□□□ 0.23
CASC9-204ENST00000523313 IFT140Q96RY7 1462 aa16.48■□□□□ 0.23
CASC9-204ENST00000523313 RSF1Q96T23 1441 aaPredicted RBP16.41■□□□□ 0.22
CASC9-204ENST00000523313 EIF4G3O43432 1585 aaKnown RBP16.41■□□□□ 0.22
CASC9-204ENST00000523313 CHD1O14646 1710 aa16.4■□□□□ 0.22
CASC9-204ENST00000523313 FBLN2P98095 1184 aa16.38■□□□□ 0.21
CASC9-204ENST00000523313 AQRO60306 1485 aaKnown RBP eCLIP16.34■□□□□ 0.21
CASC9-204ENST00000523313 TOPBP1Q92547 1522 aa16.32■□□□□ 0.2
CASC9-204ENST00000523313 ILDR1Q86SU0 546 aaPredicted RBP16.25■□□□□ 0.19
CASC9-204ENST00000523313 PRDM2Q13029 1718 aa16.23■□□□□ 0.19
CASC9-204ENST00000523313 TOP2AP11388 1531 aaKnown RBP16.23■□□□□ 0.19
CASC9-204ENST00000523313 CLASP1Q7Z460 1538 aa16.22■□□□□ 0.19
CASC9-204ENST00000523313 TARBP1Q13395 1621 aaKnown RBP16.22■□□□□ 0.19
CASC9-204ENST00000523313 ABCC8Q09428 1581 aa16.17■□□□□ 0.18
CASC9-204ENST00000523313 DNMBPQ6XZF7 1577 aa16.17■□□□□ 0.18
CASC9-204ENST00000523313 SNAPC4Q5SXM2 1469 aa16.14■□□□□ 0.17
CASC9-204ENST00000523313 TDRD9Q8NDG6 1382 aaKnown RBP16.13■□□□□ 0.17
CASC9-204ENST00000523313 POLA1P09884 1462 aaPredicted RBP16.11■□□□□ 0.17
CASC9-204ENST00000523313 GAPVD1Q14C86 1478 aa16.11■□□□□ 0.17
CASC9-204ENST00000523313 SYNJ1O43426 1573 aa16.11■□□□□ 0.17
CASC9-204ENST00000523313 RAD54L2Q9Y4B4 1467 aa16.1■□□□□ 0.17
CASC9-204ENST00000523313 CHMP7Q8WUX9 453 aaPredicted RBP16.1■□□□□ 0.17
CASC9-204ENST00000523313 CCDC88BA6NC98 1476 aa16.09■□□□□ 0.17
CASC9-204ENST00000523313 SOGA1O94964 1423 aa16.02■□□□□ 0.16
CASC9-204ENST00000523313 MAGI1Q96QZ7 1491 aaPredicted RBP16.01■□□□□ 0.15
CASC9-204ENST00000523313 SYNJ2O15056 1496 aa15.98■□□□□ 0.15
CASC9-204ENST00000523313 KDM4FA0A1W2PPD8 638 aa15.98■□□□□ 0.15
CASC9-204ENST00000523313 ERCC6L2Q5T890 1561 aa15.97■□□□□ 0.15
CASC9-204ENST00000523313 GRIN2BQ13224 1484 aa15.95■□□□□ 0.14
CASC9-204ENST00000523313 WDR97A6NE52 1622 aa15.93■□□□□ 0.14
CASC9-204ENST00000523313 KIF13AQ9H1H9 1805 aa15.91■□□□□ 0.14
CASC9-204ENST00000523313 FGD5Q6ZNL6 1462 aa15.91■□□□□ 0.14
CASC9-204ENST00000523313 CEP170Q5SW79 1584 aa15.82■□□□□ 0.12
CASC9-204ENST00000523313 FAM69CQ0P6D2 419 aa15.81■□□□□ 0.12
CASC9-204ENST00000523313 PBRM1Q86U86 1689 aa15.81■□□□□ 0.12
CASC9-204ENST00000523313 CUX1P39880 1505 aa15.79■□□□□ 0.12
CASC9-204ENST00000523313 SENP3Q9H4L4 574 aaPredicted RBP15.79■□□□□ 0.12
CASC9-204ENST00000523313 GRIN2AQ12879 1464 aa15.76■□□□□ 0.11
CASC9-204ENST00000523313 ABCC10Q5T3U5 1492 aa15.76■□□□□ 0.11
CASC9-204ENST00000523313 KDM6BO15054 1643 aa15.75■□□□□ 0.11
CASC9-204ENST00000523313 NUP160Q12769 1436 aa15.73■□□□□ 0.11
CASC9-204ENST00000523313 SHROOM2Q13796 1616 aa15.72■□□□□ 0.11
CASC9-204ENST00000523313 ABCA5Q8WWZ7 1642 aa15.71■□□□□ 0.11
CASC9-204ENST00000523313 DIP2BQ9P265 1576 aa15.7■□□□□ 0.1
CASC9-204ENST00000523313 HECW2Q9P2P5 1572 aa15.66■□□□□ 0.1
CASC9-204ENST00000523313 ABCA10Q8WWZ4 1543 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms