RNA–Protein interactions for RNA: ENST00000370475.8

FMR1-205, Transcript of fragile X mental retardation 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FMR1, Length 4,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-205ENST00000370475 NISCHQ9Y2I1 1504 aa35.86■■■■□ 3.33
FMR1-205ENST00000370475 DCAF8L2P0C7V8 631 aa32.85■■■□□ 2.85
FMR1-205ENST00000370475 SHROOM4Q9ULL8 1493 aa31.87■■■□□ 2.69
FMR1-205ENST00000370475 SUPT5HO00267 1087 aaKnown RBP31.35■■■□□ 2.61
FMR1-205ENST00000370475 ABCC9O60706 1549 aa30.21■■■□□ 2.43
FMR1-205ENST00000370475 CCDC180Q9P1Z9 1646 aa30.08■■■□□ 2.41
FMR1-205ENST00000370475 ZCCHC6Q5VYS8 1495 aaKnown RBP29.92■■■□□ 2.38
FMR1-205ENST00000370475 EHMT2Q96KQ7 1210 aa29.53■■■□□ 2.32
FMR1-205ENST00000370475 PABPN1Q86U42 306 aaKnown RBP eCLIP29.33■■■□□ 2.29
FMR1-205ENST00000370475 FAM9AQ8IZU1 332 aaPredicted RBP29.28■■■□□ 2.28
FMR1-205ENST00000370475 SCRIBQ14160 1630 aa29.17■■■□□ 2.26
FMR1-205ENST00000370475 CHIC1Q5VXU3 224 aa29.07■■■□□ 2.24
FMR1-205ENST00000370475 TRIM41Q8WV44 630 aa29.04■■■□□ 2.24
FMR1-205ENST00000370475 DCAF1Q9Y4B6 1507 aa28.79■■■□□ 2.2
FMR1-205ENST00000370475 LOC105371045A0A1W2PR82 267 aa28.65■■■□□ 2.18
FMR1-205ENST00000370475 NACADO15069 1562 aa28.61■■■□□ 2.17
FMR1-205ENST00000370475 RB1CC1Q8TDY2 1594 aa28.56■■■□□ 2.16
FMR1-205ENST00000370475 RSF1Q96T23 1441 aaPredicted RBP28.39■■■□□ 2.13
FMR1-205ENST00000370475 PCGF6Q9BYE7 350 aa28.36■■■□□ 2.13
FMR1-205ENST00000370475 RANGAP1P46060 587 aaPredicted RBP28.34■■■□□ 2.13
FMR1-205ENST00000370475 CECR2Q9BXF3 1484 aa28.31■■■□□ 2.12
FMR1-205ENST00000370475 TTBK1Q5TCY1 1321 aaPredicted RBP28.31■■■□□ 2.12
FMR1-205ENST00000370475 UBTFP17480 764 aaKnown RBP28.18■■■□□ 2.1
FMR1-205ENST00000370475 MYO15BQ96JP2 1530 aa28.13■■■□□ 2.09
FMR1-205ENST00000370475 PPARGC1BQ86YN6 1023 aaKnown RBP28.1■■■□□ 2.09
FMR1-205ENST00000370475 MROH2BQ7Z745 1585 aa27.94■■■□□ 2.06
FMR1-205ENST00000370475 APLP2Q06481 763 aa27.83■■■□□ 2.05
FMR1-205ENST00000370475 BAZ1AQ9NRL2 1556 aaPredicted RBP27.76■■■□□ 2.03
FMR1-205ENST00000370475 WIZO95785 1651 aa27.6■■■□□ 2.01
FMR1-205ENST00000370475 ATP1B4Q9UN42 357 aaPredicted RBP27.56■■■□□ 2
FMR1-205ENST00000370475 TRIM26Q12899 539 aaPredicted RBP27.51■■□□□ 1.99
FMR1-205ENST00000370475 BAZ1BQ9UIG0 1483 aaKnown RBP27.47■■□□□ 1.99
FMR1-205ENST00000370475 CSRNP3Q8WYN3 585 aa27.47■■□□□ 1.99
FMR1-205ENST00000370475 CCDC88BA6NC98 1476 aa27.38■■□□□ 1.97
FMR1-205ENST00000370475 SMARCA4P51532 1647 aa27.28■■□□□ 1.96
FMR1-205ENST00000370475 CCER1Q8TC90 406 aaPredicted RBP27.22■■□□□ 1.95
FMR1-205ENST00000370475 TOP2AP11388 1531 aaKnown RBP27.15■■□□□ 1.94
FMR1-205ENST00000370475 WRNQ14191 1432 aaPredicted RBP eCLIP27.15■■□□□ 1.94
FMR1-205ENST00000370475 ABCC8Q09428 1581 aa27.15■■□□□ 1.94
FMR1-205ENST00000370475 ATAD2BQ9ULI0 1458 aa27.15■■□□□ 1.94
FMR1-205ENST00000370475 HRCP23327 699 aa27.11■■□□□ 1.93
FMR1-205ENST00000370475 HNRNPUL2Q1KMD3 747 aaKnown RBP27.05■■□□□ 1.92
FMR1-205ENST00000370475 SMARCA2P51531 1590 aa27.03■■□□□ 1.92
FMR1-205ENST00000370475 SOGA1O94964 1423 aa27.01■■□□□ 1.91
FMR1-205ENST00000370475 BICRAQ9NZM4 1560 aa27.01■■□□□ 1.91
FMR1-205ENST00000370475 ITGAEP38570 1179 aa27■■□□□ 1.91
FMR1-205ENST00000370475 P3H3Q8IVL6 736 aa26.96■■□□□ 1.91
FMR1-205ENST00000370475 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.92■■□□□ 1.9
FMR1-205ENST00000370475 ZEB1P37275 1124 aaPredicted RBP26.85■■□□□ 1.89
FMR1-205ENST00000370475 UNC13AQ9UPW8 1703 aa26.84■■□□□ 1.89
FMR1-205ENST00000370475 FBLN2P98095 1184 aa26.78■■□□□ 1.88
FMR1-205ENST00000370475 EIF4G1Q04637 1599 aaKnown RBP26.75■■□□□ 1.87
FMR1-205ENST00000370475 EEA1Q15075 1411 aa26.69■■□□□ 1.86
FMR1-205ENST00000370475 CEP162Q5TB80 1403 aa26.69■■□□□ 1.86
FMR1-205ENST00000370475 RUSC2Q8N2Y8 1516 aa26.68■■□□□ 1.86
FMR1-205ENST00000370475 GOLGA3Q08378 1498 aa26.62■■□□□ 1.85
FMR1-205ENST00000370475 ARID3CA6NKF2 412 aa26.61■■□□□ 1.85
FMR1-205ENST00000370475 NCAPD3P42695 1498 aa26.61■■□□□ 1.85
FMR1-205ENST00000370475 CLIP1P30622 1438 aa26.6■■□□□ 1.85
FMR1-205ENST00000370475 CADPSQ9ULU8 1353 aa26.6■■□□□ 1.85
FMR1-205ENST00000370475 TNIKQ9UKE5 1360 aa26.57■■□□□ 1.84
FMR1-205ENST00000370475 KIF27Q86VH2 1401 aa26.56■■□□□ 1.84
FMR1-205ENST00000370475 FAM50AQ14320 339 aaKnown RBP26.53■■□□□ 1.84
FMR1-205ENST00000370475 CEP164Q9UPV0 1460 aa26.5■■□□□ 1.83
FMR1-205ENST00000370475 CUX2O14529 1486 aa26.47■■□□□ 1.83
FMR1-205ENST00000370475 DNAJC5BQ9UF47 199 aa26.47■■□□□ 1.83
FMR1-205ENST00000370475 CC2D2AQ9P2K1 1620 aa26.32■■□□□ 1.8
FMR1-205ENST00000370475 TDRD9Q8NDG6 1382 aaKnown RBP26.31■■□□□ 1.8
FMR1-205ENST00000370475 CARMIL1Q5VZK9 1371 aa26.31■■□□□ 1.8
FMR1-205ENST00000370475 RAPGEF2Q9Y4G8 1499 aa26.27■■□□□ 1.8
FMR1-205ENST00000370475 FANCD2Q9BXW9 1451 aa26.26■■□□□ 1.8
FMR1-205ENST00000370475 SYNJ1O43426 1573 aa26.23■■□□□ 1.79
FMR1-205ENST00000370475 PDS5BQ9NTI5 1447 aa26.23■■□□□ 1.79
FMR1-205ENST00000370475 NESP48681 1621 aa26.22■■□□□ 1.79
FMR1-205ENST00000370475 ERCC6Q03468 1493 aa26.21■■□□□ 1.79
FMR1-205ENST00000370475 CFTRP13569 1480 aa26.2■■□□□ 1.78
FMR1-205ENST00000370475 HMGXB3Q12766 1538 aa26.2■■□□□ 1.78
FMR1-205ENST00000370475 PEG3Q9GZU2 1588 aa26.19■■□□□ 1.78
FMR1-205ENST00000370475 CHMP7Q8WUX9 453 aaPredicted RBP26.19■■□□□ 1.78
FMR1-205ENST00000370475 RAD54L2Q9Y4B4 1467 aa26.07■■□□□ 1.76
FMR1-205ENST00000370475 FGD5Q6ZNL6 1462 aa26.07■■□□□ 1.76
FMR1-205ENST00000370475 NEUROD1Q13562 356 aa26.04■■□□□ 1.76
FMR1-205ENST00000370475 KANK4Q5T7N3 995 aaPredicted RBP26.04■■□□□ 1.76
FMR1-205ENST00000370475 IGF1RP08069 1367 aa26■■□□□ 1.75
FMR1-205ENST00000370475 VPS8Q8N3P4 1428 aa26■■□□□ 1.75
FMR1-205ENST00000370475 CUX1P39880 1505 aa25.99■■□□□ 1.75
FMR1-205ENST00000370475 TRIM52Q96A61 297 aa25.97■■□□□ 1.75
FMR1-205ENST00000370475 ZNF777Q9ULD5 760 aaPredicted RBP25.95■■□□□ 1.74
FMR1-205ENST00000370475 YTHDC1Q96MU7 727 aaKnown RBP25.94■■□□□ 1.74
FMR1-205ENST00000370475 MTUS2Q5JR59 1369 aa25.93■■□□□ 1.74
FMR1-205ENST00000370475 MYT1LQ9UL68 1186 aa25.93■■□□□ 1.74
FMR1-205ENST00000370475 CHIC2Q9UKJ5 165 aa25.88■■□□□ 1.73
FMR1-205ENST00000370475 TOP2BQ02880 1626 aa25.87■■□□□ 1.73
FMR1-205ENST00000370475 DIEXFQ68CQ4 756 aaKnown RBP25.84■■□□□ 1.73
FMR1-205ENST00000370475 CDK11AQ9UQ88 783 aaPredicted RBP25.82■■□□□ 1.72
FMR1-205ENST00000370475 FHOD3Q2V2M9 1422 aa25.77■■□□□ 1.72
FMR1-205ENST00000370475 TOPBP1Q92547 1522 aa25.73■■□□□ 1.71
FMR1-205ENST00000370475 AQRO60306 1485 aaKnown RBP eCLIP25.72■■□□□ 1.717e-6■■□□□ 12.2
FMR1-205ENST00000370475 POLA1P09884 1462 aaPredicted RBP25.71■■□□□ 1.71
FMR1-205ENST00000370475 GAPVD1Q14C86 1478 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms