RNA–Protein interactions for RNA: ENST00000296783.7

PAPD4-201, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS P3 TSL 2 BASIC

Gene PAPD4, Length 3,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-201ENST00000296783 NISCHQ9Y2I1 1504 aa22.59■■□□□ 1.21
PAPD4-201ENST00000296783 CCDC180Q9P1Z9 1646 aa19.38■□□□□ 0.69
PAPD4-201ENST00000296783 ZCCHC6Q5VYS8 1495 aaKnown RBP19.09■□□□□ 0.65
PAPD4-201ENST00000296783 SHROOM4Q9ULL8 1493 aa18.9■□□□□ 0.62
PAPD4-201ENST00000296783 DCAF1Q9Y4B6 1507 aa18.61■□□□□ 0.57
PAPD4-201ENST00000296783 DCAF8L2P0C7V8 631 aa18.54■□□□□ 0.56
PAPD4-201ENST00000296783 SUPT5HO00267 1087 aaKnown RBP18.41■□□□□ 0.54
PAPD4-201ENST00000296783 MYO15BQ96JP2 1530 aa18.18■□□□□ 0.5
PAPD4-201ENST00000296783 SCRIBQ14160 1630 aa18.01■□□□□ 0.47
PAPD4-201ENST00000296783 ABCC9O60706 1549 aa17.98■□□□□ 0.47
PAPD4-201ENST00000296783 NACADO15069 1562 aa17.94■□□□□ 0.46
PAPD4-201ENST00000296783 CHIC1Q5VXU3 224 aa17.88■□□□□ 0.45
PAPD4-201ENST00000296783 RSF1Q96T23 1441 aaPredicted RBP17.76■□□□□ 0.43
PAPD4-201ENST00000296783 RB1CC1Q8TDY2 1594 aa17.67■□□□□ 0.42
PAPD4-201ENST00000296783 CECR2Q9BXF3 1484 aa17.58■□□□□ 0.41
PAPD4-201ENST00000296783 MROH2BQ7Z745 1585 aa17.52■□□□□ 0.4
PAPD4-201ENST00000296783 UNC13AQ9UPW8 1703 aa17.44■□□□□ 0.38
PAPD4-201ENST00000296783 WIZO95785 1651 aa17.42■□□□□ 0.38
PAPD4-201ENST00000296783 BAZ1AQ9NRL2 1556 aaPredicted RBP17.37■□□□□ 0.37
PAPD4-201ENST00000296783 LOC105371045A0A1W2PR82 267 aa17.27■□□□□ 0.36
PAPD4-201ENST00000296783 SMARCA4P51532 1647 aa17.26■□□□□ 0.35
PAPD4-201ENST00000296783 BICRAQ9NZM4 1560 aa17.22■□□□□ 0.35
PAPD4-201ENST00000296783 TRIM41Q8WV44 630 aa17.21■□□□□ 0.35
PAPD4-201ENST00000296783 TOP2AP11388 1531 aaKnown RBP17.18■□□□□ 0.34
PAPD4-201ENST00000296783 EIF4G1Q04637 1599 aaKnown RBP17.16■□□□□ 0.34
PAPD4-201ENST00000296783 PABPN1Q86U42 306 aaKnown RBP eCLIP17.1■□□□□ 0.33
PAPD4-201ENST00000296783 SMARCA2P51531 1590 aa17.07■□□□□ 0.32
PAPD4-201ENST00000296783 CCDC88BA6NC98 1476 aa17.06■□□□□ 0.32
PAPD4-201ENST00000296783 PCGF6Q9BYE7 350 aa17■□□□□ 0.31
PAPD4-201ENST00000296783 PEG3Q9GZU2 1588 aa17■□□□□ 0.31
PAPD4-201ENST00000296783 FAM9AQ8IZU1 332 aaPredicted RBP16.99■□□□□ 0.31
PAPD4-201ENST00000296783 ABCC8Q09428 1581 aa16.91■□□□□ 0.3
PAPD4-201ENST00000296783 HRCP23327 699 aa16.9■□□□□ 0.3
PAPD4-201ENST00000296783 ATAD2BQ9ULI0 1458 aa16.85■□□□□ 0.29
PAPD4-201ENST00000296783 TRIM26Q12899 539 aaPredicted RBP16.8■□□□□ 0.28
PAPD4-201ENST00000296783 EHMT2Q96KQ7 1210 aa16.78■□□□□ 0.28
PAPD4-201ENST00000296783 BAZ1BQ9UIG0 1483 aaKnown RBP16.76■□□□□ 0.27
PAPD4-201ENST00000296783 SOGA1O94964 1423 aa16.69■□□□□ 0.26
PAPD4-201ENST00000296783 WRNQ14191 1432 aaPredicted RBP eCLIP16.66■□□□□ 0.26
PAPD4-201ENST00000296783 RUSC2Q8N2Y8 1516 aa16.63■□□□□ 0.25
PAPD4-201ENST00000296783 EEA1Q15075 1411 aa16.63■□□□□ 0.25
PAPD4-201ENST00000296783 SYNJ1O43426 1573 aa16.62■□□□□ 0.25
PAPD4-201ENST00000296783 HMGXB3Q12766 1538 aa16.59■□□□□ 0.25
PAPD4-201ENST00000296783 NCAPD3P42695 1498 aa16.59■□□□□ 0.25
PAPD4-201ENST00000296783 CSRNP3Q8WYN3 585 aa16.56■□□□□ 0.24
PAPD4-201ENST00000296783 TNIKQ9UKE5 1360 aa16.53■□□□□ 0.24
PAPD4-201ENST00000296783 PPARGC1BQ86YN6 1023 aaKnown RBP16.53■□□□□ 0.24
PAPD4-201ENST00000296783 CEP162Q5TB80 1403 aa16.51■□□□□ 0.23
PAPD4-201ENST00000296783 GOLGA3Q08378 1498 aa16.47■□□□□ 0.23
PAPD4-201ENST00000296783 TOP2BQ02880 1626 aa16.47■□□□□ 0.23
PAPD4-201ENST00000296783 KIF21BO75037 1637 aa16.44■□□□□ 0.22
PAPD4-201ENST00000296783 BIVM-ERCC5R4GMW8 1640 aa16.44■□□□□ 0.22
PAPD4-201ENST00000296783 CEP164Q9UPV0 1460 aa16.41■□□□□ 0.22
PAPD4-201ENST00000296783 UBTFP17480 764 aaKnown RBP16.4■□□□□ 0.22
PAPD4-201ENST00000296783 CFTRP13569 1480 aa16.38■□□□□ 0.21
PAPD4-201ENST00000296783 CUX1P39880 1505 aa16.34■□□□□ 0.21
PAPD4-201ENST00000296783 ZEB1P37275 1124 aaPredicted RBP16.32■□□□□ 0.2
PAPD4-201ENST00000296783 RAPGEF2Q9Y4G8 1499 aa16.31■□□□□ 0.2
PAPD4-201ENST00000296783 PRDM2Q13029 1718 aa16.3■□□□□ 0.2
PAPD4-201ENST00000296783 CC2D2AQ9P2K1 1620 aa16.27■□□□□ 0.19
PAPD4-201ENST00000296783 CLIP1P30622 1438 aa16.24■□□□□ 0.19
PAPD4-201ENST00000296783 PRXQ9BXM0 1461 aa16.23■□□□□ 0.19
PAPD4-201ENST00000296783 ERICH3Q5RHP9 1530 aa16.22■□□□□ 0.19
PAPD4-201ENST00000296783 CADPSQ9ULU8 1353 aa16.21■□□□□ 0.19
PAPD4-201ENST00000296783 TTBK1Q5TCY1 1321 aaPredicted RBP16.19■□□□□ 0.18
PAPD4-201ENST00000296783 VPS8Q8N3P4 1428 aa16.18■□□□□ 0.18
PAPD4-201ENST00000296783 KIF27Q86VH2 1401 aa16.17■□□□□ 0.18
PAPD4-201ENST00000296783 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.12■□□□□ 0.17
PAPD4-201ENST00000296783 FGD5Q6ZNL6 1462 aa16.06■□□□□ 0.16
PAPD4-201ENST00000296783 ARAP1Q96P48 1450 aa16.06■□□□□ 0.16
PAPD4-201ENST00000296783 RANGAP1P46060 587 aaPredicted RBP16.05■□□□□ 0.16
PAPD4-201ENST00000296783 CCER1Q8TC90 406 aaPredicted RBP16.05■□□□□ 0.16
PAPD4-201ENST00000296783 CUX2O14529 1486 aa16.05■□□□□ 0.16
PAPD4-201ENST00000296783 FANCD2Q9BXW9 1451 aa16.05■□□□□ 0.16
PAPD4-201ENST00000296783 IGF1RP08069 1367 aa16.02■□□□□ 0.16
PAPD4-201ENST00000296783 NESP48681 1621 aa15.98■□□□□ 0.15
PAPD4-201ENST00000296783 DNMBPQ6XZF7 1577 aa15.97■□□□□ 0.15
PAPD4-201ENST00000296783 APLP2Q06481 763 aa15.97■□□□□ 0.15
PAPD4-201ENST00000296783 ARHGAP35Q9NRY4 1499 aa15.96■□□□□ 0.15
PAPD4-201ENST00000296783 TOPBP1Q92547 1522 aa15.94■□□□□ 0.14
PAPD4-201ENST00000296783 CARMIL1Q5VZK9 1371 aa15.93■□□□□ 0.14
PAPD4-201ENST00000296783 LAMC3Q9Y6N6 1575 aa15.92■□□□□ 0.14
PAPD4-201ENST00000296783 POLA1P09884 1462 aaPredicted RBP15.91■□□□□ 0.14
PAPD4-201ENST00000296783 ABCA10Q8WWZ4 1543 aa15.9■□□□□ 0.14
PAPD4-201ENST00000296783 RAD54L2Q9Y4B4 1467 aa15.9■□□□□ 0.14
PAPD4-201ENST00000296783 HNRNPUL2Q1KMD3 747 aaKnown RBP15.88■□□□□ 0.13
PAPD4-201ENST00000296783 KANK4Q5T7N3 995 aaPredicted RBP15.87■□□□□ 0.13
PAPD4-201ENST00000296783 URB2Q14146 1524 aaKnown RBP15.85■□□□□ 0.13
PAPD4-201ENST00000296783 DNAJC5BQ9UF47 199 aa15.84■□□□□ 0.13
PAPD4-201ENST00000296783 WDR97A6NE52 1622 aa15.83■□□□□ 0.12
PAPD4-201ENST00000296783 CUL7Q14999 1698 aa15.79■□□□□ 0.12
PAPD4-201ENST00000296783 RRBP1Q9P2E9 1410 aaKnown RBP15.79■□□□□ 0.12
PAPD4-201ENST00000296783 PDS5BQ9NTI5 1447 aa15.77■□□□□ 0.12
PAPD4-201ENST00000296783 MAP3K1Q13233 1512 aa15.76■□□□□ 0.11
PAPD4-201ENST00000296783 KIF21AQ7Z4S6 1674 aa15.76■□□□□ 0.11
PAPD4-201ENST00000296783 TIAM1Q13009 1591 aa15.75■□□□□ 0.11
PAPD4-201ENST00000296783 ABCA5Q8WWZ7 1642 aa15.75■□□□□ 0.11
PAPD4-201ENST00000296783 CTTNBP2Q8WZ74 1663 aa15.72■□□□□ 0.11
PAPD4-201ENST00000296783 FHAD1B1AJZ9 1412 aa15.7■□□□□ 0.1
PAPD4-201ENST00000296783 PCF11O94913 1555 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms