RNA–Protein interactions for RNA: ENST00000370477.5

FMR1-206, Transcript of fragile X mental retardation 1, humanhuman

TSL 5 BASIC

Gene FMR1, Length 3,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-206ENST00000370477 NISCHQ9Y2I1 1504 aa39.52■■■■□ 3.92
FMR1-206ENST00000370477 DCAF8L2P0C7V8 631 aa34.67■■■■□ 3.14
FMR1-206ENST00000370477 SHROOM4Q9ULL8 1493 aa34.04■■■■□ 3.04
FMR1-206ENST00000370477 CCDC180Q9P1Z9 1646 aa33.59■■■□□ 2.97
FMR1-206ENST00000370477 ABCC9O60706 1549 aa33.22■■■□□ 2.91
FMR1-206ENST00000370477 ZCCHC6Q5VYS8 1495 aaKnown RBP33.06■■■□□ 2.88
FMR1-206ENST00000370477 SUPT5HO00267 1087 aaKnown RBP32.97■■■□□ 2.87
FMR1-206ENST00000370477 SCRIBQ14160 1630 aa32.09■■■□□ 2.73
FMR1-206ENST00000370477 DCAF1Q9Y4B6 1507 aa31.94■■■□□ 2.7
FMR1-206ENST00000370477 PABPN1Q86U42 306 aaKnown RBP eCLIP31.92■■■□□ 2.7
FMR1-206ENST00000370477 NACADO15069 1562 aa31.63■■■□□ 2.65
FMR1-206ENST00000370477 RB1CC1Q8TDY2 1594 aa31.51■■■□□ 2.63
FMR1-206ENST00000370477 MYO15BQ96JP2 1530 aa31.34■■■□□ 2.61
FMR1-206ENST00000370477 CECR2Q9BXF3 1484 aa31.26■■■□□ 2.59
FMR1-206ENST00000370477 RSF1Q96T23 1441 aaPredicted RBP31.06■■■□□ 2.56
FMR1-206ENST00000370477 CHIC1Q5VXU3 224 aa30.94■■■□□ 2.54
FMR1-206ENST00000370477 EHMT2Q96KQ7 1210 aa30.86■■■□□ 2.53
FMR1-206ENST00000370477 MROH2BQ7Z745 1585 aa30.86■■■□□ 2.53
FMR1-206ENST00000370477 FAM9AQ8IZU1 332 aaPredicted RBP30.7■■■□□ 2.51
FMR1-206ENST00000370477 UNC13AQ9UPW8 1703 aa30.66■■■□□ 2.5
FMR1-206ENST00000370477 WIZO95785 1651 aa30.57■■■□□ 2.48
FMR1-206ENST00000370477 BICRAQ9NZM4 1560 aa30.55■■■□□ 2.48
FMR1-206ENST00000370477 TRIM41Q8WV44 630 aa30.52■■■□□ 2.48
FMR1-206ENST00000370477 BAZ1AQ9NRL2 1556 aaPredicted RBP30.42■■■□□ 2.46
FMR1-206ENST00000370477 LOC105371045A0A1W2PR82 267 aa30.4■■■□□ 2.46
FMR1-206ENST00000370477 SMARCA4P51532 1647 aa30.24■■■□□ 2.43
FMR1-206ENST00000370477 CCDC88BA6NC98 1476 aa30.03■■■□□ 2.4
FMR1-206ENST00000370477 ATAD2BQ9ULI0 1458 aa29.96■■■□□ 2.39
FMR1-206ENST00000370477 BAZ1BQ9UIG0 1483 aaKnown RBP29.95■■■□□ 2.38
FMR1-206ENST00000370477 TOP2AP11388 1531 aaKnown RBP29.87■■■□□ 2.37
FMR1-206ENST00000370477 EIF4G1Q04637 1599 aaKnown RBP29.8■■■□□ 2.36
FMR1-206ENST00000370477 DNAJC5BQ9UF47 199 aa29.75■■■□□ 2.35
FMR1-206ENST00000370477 ABCC8Q09428 1581 aa29.73■■■□□ 2.35
FMR1-206ENST00000370477 SMARCA2P51531 1590 aa29.72■■■□□ 2.35
FMR1-206ENST00000370477 RANGAP1P46060 587 aaPredicted RBP29.67■■■□□ 2.34
FMR1-206ENST00000370477 PPARGC1BQ86YN6 1023 aaKnown RBP29.52■■■□□ 2.32
FMR1-206ENST00000370477 TTBK1Q5TCY1 1321 aaPredicted RBP29.46■■■□□ 2.31
FMR1-206ENST00000370477 UBTFP17480 764 aaKnown RBP29.44■■■□□ 2.3
FMR1-206ENST00000370477 NCAPD3P42695 1498 aa29.43■■■□□ 2.3
FMR1-206ENST00000370477 CC2D2AQ9P2K1 1620 aa29.42■■■□□ 2.3
FMR1-206ENST00000370477 PEG3Q9GZU2 1588 aa29.35■■■□□ 2.29
FMR1-206ENST00000370477 SOGA1O94964 1423 aa29.34■■■□□ 2.29
FMR1-206ENST00000370477 WRNQ14191 1432 aaPredicted RBP eCLIP29.33■■■□□ 2.29
FMR1-206ENST00000370477 PCGF6Q9BYE7 350 aa29.31■■■□□ 2.28
FMR1-206ENST00000370477 RUSC2Q8N2Y8 1516 aa29.24■■■□□ 2.27
FMR1-206ENST00000370477 CSRNP3Q8WYN3 585 aa29.21■■■□□ 2.27
FMR1-206ENST00000370477 NESP48681 1621 aa29.11■■■□□ 2.25
FMR1-206ENST00000370477 HMGXB3Q12766 1538 aa29.09■■■□□ 2.25
FMR1-206ENST00000370477 CADPSQ9ULU8 1353 aa29.07■■■□□ 2.24
FMR1-206ENST00000370477 SYNJ1O43426 1573 aa28.98■■■□□ 2.23
FMR1-206ENST00000370477 CFTRP13569 1480 aa28.92■■■□□ 2.22
FMR1-206ENST00000370477 FANCD2Q9BXW9 1451 aa28.78■■■□□ 2.2
FMR1-206ENST00000370477 CUX1P39880 1505 aa28.72■■■□□ 2.19
FMR1-206ENST00000370477 P3H3Q8IVL6 736 aa28.64■■■□□ 2.18
FMR1-206ENST00000370477 ATP1B4Q9UN42 357 aaPredicted RBP28.64■■■□□ 2.18
FMR1-206ENST00000370477 CUX2O14529 1486 aa28.63■■■□□ 2.17
FMR1-206ENST00000370477 RAD54L2Q9Y4B4 1467 aa28.6■■■□□ 2.17
FMR1-206ENST00000370477 CEP162Q5TB80 1403 aa28.58■■■□□ 2.17
FMR1-206ENST00000370477 TDRD9Q8NDG6 1382 aaKnown RBP28.57■■■□□ 2.16
FMR1-206ENST00000370477 RAPGEF2Q9Y4G8 1499 aa28.57■■■□□ 2.16
FMR1-206ENST00000370477 TRIM26Q12899 539 aaPredicted RBP28.56■■■□□ 2.16
FMR1-206ENST00000370477 FGD5Q6ZNL6 1462 aa28.54■■■□□ 2.16
FMR1-206ENST00000370477 KIF27Q86VH2 1401 aa28.53■■■□□ 2.16
FMR1-206ENST00000370477 TOP2BQ02880 1626 aa28.52■■■□□ 2.16
FMR1-206ENST00000370477 EEA1Q15075 1411 aa28.52■■■□□ 2.16
FMR1-206ENST00000370477 GOLGA3Q08378 1498 aa28.5■■■□□ 2.15
FMR1-206ENST00000370477 PDS5BQ9NTI5 1447 aa28.5■■■□□ 2.15
FMR1-206ENST00000370477 CEP164Q9UPV0 1460 aa28.5■■■□□ 2.15
FMR1-206ENST00000370477 APLP2Q06481 763 aa28.5■■■□□ 2.15
FMR1-206ENST00000370477 TNIKQ9UKE5 1360 aa28.45■■■□□ 2.15
FMR1-206ENST00000370477 FBLN2P98095 1184 aa28.42■■■□□ 2.14
FMR1-206ENST00000370477 ERCC6Q03468 1493 aa28.4■■■□□ 2.14
FMR1-206ENST00000370477 CLIP1P30622 1438 aa28.36■■■□□ 2.13
FMR1-206ENST00000370477 TOPBP1Q92547 1522 aa28.34■■■□□ 2.13
FMR1-206ENST00000370477 IGF1RP08069 1367 aa28.34■■■□□ 2.13
FMR1-206ENST00000370477 CARMIL1Q5VZK9 1371 aa28.33■■■□□ 2.13
FMR1-206ENST00000370477 POLA1P09884 1462 aaPredicted RBP28.3■■■□□ 2.12
FMR1-206ENST00000370477 URB2Q14146 1524 aaKnown RBP28.3■■■□□ 2.12
FMR1-206ENST00000370477 BIVM-ERCC5R4GMW8 1640 aa28.25■■■□□ 2.11
FMR1-206ENST00000370477 ARID3CA6NKF2 412 aa28.24■■■□□ 2.11
FMR1-206ENST00000370477 LAMC3Q9Y6N6 1575 aa28.23■■■□□ 2.11
FMR1-206ENST00000370477 HNRNPUL2Q1KMD3 747 aaKnown RBP28.2■■■□□ 2.1
FMR1-206ENST00000370477 AQRO60306 1485 aaKnown RBP eCLIP28.18■■■□□ 2.17e-6■■□□□ 12.2
FMR1-206ENST00000370477 DNMBPQ6XZF7 1577 aa28.13■■■□□ 2.09
FMR1-206ENST00000370477 KIF21AQ7Z4S6 1674 aa28.12■■■□□ 2.09
FMR1-206ENST00000370477 ITGAEP38570 1179 aa28.12■■■□□ 2.09
FMR1-206ENST00000370477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.11■■■□□ 2.09
FMR1-206ENST00000370477 PRXQ9BXM0 1461 aa28.1■■■□□ 2.09
FMR1-206ENST00000370477 HRCP23327 699 aa28.01■■■□□ 2.07
FMR1-206ENST00000370477 KIF21BO75037 1637 aa28■■■□□ 2.07
FMR1-206ENST00000370477 KANK4Q5T7N3 995 aaPredicted RBP28■■■□□ 2.07
FMR1-206ENST00000370477 GAPVD1Q14C86 1478 aa27.99■■■□□ 2.07
FMR1-206ENST00000370477 PRDM2Q13029 1718 aa27.98■■■□□ 2.07
FMR1-206ENST00000370477 MRC2Q9UBG0 1479 aa27.97■■■□□ 2.07
FMR1-206ENST00000370477 CHMP7Q8WUX9 453 aaPredicted RBP27.96■■■□□ 2.07
FMR1-206ENST00000370477 ZNF608Q9ULD9 1512 aaPredicted RBP27.95■■■□□ 2.07
FMR1-206ENST00000370477 CCER1Q8TC90 406 aaPredicted RBP27.93■■■□□ 2.06
FMR1-206ENST00000370477 ABCA10Q8WWZ4 1543 aa27.92■■■□□ 2.06
FMR1-206ENST00000370477 VPS8Q8N3P4 1428 aa27.87■■■□□ 2.05
FMR1-206ENST00000370477 ARAP1Q96P48 1450 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms