RNA–Protein interactions for RNA: ENST00000504233.5

PAPD4-207, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 1 (best) BASIC

Gene PAPD4, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-207ENST00000504233 NISCHQ9Y2I1 1504 aa23.32■■□□□ 1.32
PAPD4-207ENST00000504233 SHROOM4Q9ULL8 1493 aa20.15■□□□□ 0.82
PAPD4-207ENST00000504233 SUPT5HO00267 1087 aaKnown RBP19.73■□□□□ 0.75
PAPD4-207ENST00000504233 CCDC180Q9P1Z9 1646 aa19.72■□□□□ 0.75
PAPD4-207ENST00000504233 ZCCHC6Q5VYS8 1495 aaKnown RBP19.69■□□□□ 0.74
PAPD4-207ENST00000504233 DCAF8L2P0C7V8 631 aa19.68■□□□□ 0.74
PAPD4-207ENST00000504233 CHIC1Q5VXU3 224 aa19.03■□□□□ 0.64
PAPD4-207ENST00000504233 DCAF1Q9Y4B6 1507 aa18.99■□□□□ 0.63
PAPD4-207ENST00000504233 MYO15BQ96JP2 1530 aa18.97■□□□□ 0.63
PAPD4-207ENST00000504233 PPARGC1BQ86YN6 1023 aaKnown RBP18.72■□□□□ 0.59
PAPD4-207ENST00000504233 SCRIBQ14160 1630 aa18.7■□□□□ 0.58
PAPD4-207ENST00000504233 LOC105371045A0A1W2PR82 267 aa18.59■□□□□ 0.57
PAPD4-207ENST00000504233 ABCC9O60706 1549 aa18.58■□□□□ 0.56
PAPD4-207ENST00000504233 PCGF6Q9BYE7 350 aa18.51■□□□□ 0.55
PAPD4-207ENST00000504233 RSF1Q96T23 1441 aaPredicted RBP18.49■□□□□ 0.55
PAPD4-207ENST00000504233 HRCP23327 699 aa18.36■□□□□ 0.53
PAPD4-207ENST00000504233 RB1CC1Q8TDY2 1594 aa18.33■□□□□ 0.52
PAPD4-207ENST00000504233 CECR2Q9BXF3 1484 aa18.3■□□□□ 0.52
PAPD4-207ENST00000504233 NACADO15069 1562 aa18.29■□□□□ 0.52
PAPD4-207ENST00000504233 FAM9AQ8IZU1 332 aaPredicted RBP18.29■□□□□ 0.52
PAPD4-207ENST00000504233 TRIM41Q8WV44 630 aa18.28■□□□□ 0.52
PAPD4-207ENST00000504233 EHMT2Q96KQ7 1210 aa18.25■□□□□ 0.51
PAPD4-207ENST00000504233 MROH2BQ7Z745 1585 aa18.2■□□□□ 0.5
PAPD4-207ENST00000504233 WIZO95785 1651 aa18.1■□□□□ 0.49
PAPD4-207ENST00000504233 TRIM26Q12899 539 aaPredicted RBP18.03■□□□□ 0.48
PAPD4-207ENST00000504233 BAZ1AQ9NRL2 1556 aaPredicted RBP17.89■□□□□ 0.45
PAPD4-207ENST00000504233 PABPN1Q86U42 306 aaKnown RBP eCLIP17.85■□□□□ 0.45
PAPD4-207ENST00000504233 UNC13AQ9UPW8 1703 aa17.79■□□□□ 0.44
PAPD4-207ENST00000504233 SCAF1Q9H7N4 1312 aaKnown RBP17.79■□□□□ 0.44
PAPD4-207ENST00000504233 SMARCA4P51532 1647 aa17.76■□□□□ 0.43
PAPD4-207ENST00000504233 ABCC8Q09428 1581 aa17.74■□□□□ 0.43
PAPD4-207ENST00000504233 TOP2AP11388 1531 aaKnown RBP17.73■□□□□ 0.43
PAPD4-207ENST00000504233 CCDC88BA6NC98 1476 aa17.73■□□□□ 0.43
PAPD4-207ENST00000504233 EIF4G1Q04637 1599 aaKnown RBP17.72■□□□□ 0.43
PAPD4-207ENST00000504233 SMARCA2P51531 1590 aa17.66■□□□□ 0.42
PAPD4-207ENST00000504233 TTBK1Q5TCY1 1321 aaPredicted RBP17.63■□□□□ 0.41
PAPD4-207ENST00000504233 PELP1Q8IZL8 1130 aaKnown RBP17.6■□□□□ 0.41
PAPD4-207ENST00000504233 BICRAQ9NZM4 1560 aa17.58■□□□□ 0.4
PAPD4-207ENST00000504233 SOGA1O94964 1423 aa17.57■□□□□ 0.4
PAPD4-207ENST00000504233 ZEB1P37275 1124 aaPredicted RBP17.54■□□□□ 0.4
PAPD4-207ENST00000504233 RUSC2Q8N2Y8 1516 aa17.5■□□□□ 0.39
PAPD4-207ENST00000504233 UBTFP17480 764 aaKnown RBP17.47■□□□□ 0.39
PAPD4-207ENST00000504233 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.46■□□□□ 0.39
PAPD4-207ENST00000504233 CSRNP3Q8WYN3 585 aa17.44■□□□□ 0.38
PAPD4-207ENST00000504233 CEP162Q5TB80 1403 aa17.43■□□□□ 0.38
PAPD4-207ENST00000504233 WRNQ14191 1432 aaPredicted RBP eCLIP17.38■□□□□ 0.37
PAPD4-207ENST00000504233 CCER1Q8TC90 406 aaPredicted RBP17.37■□□□□ 0.37
PAPD4-207ENST00000504233 ATAD2BQ9ULI0 1458 aa17.34■□□□□ 0.37
PAPD4-207ENST00000504233 TNIKQ9UKE5 1360 aa17.34■□□□□ 0.37
PAPD4-207ENST00000504233 BAZ1BQ9UIG0 1483 aaKnown RBP17.32■□□□□ 0.36
PAPD4-207ENST00000504233 PEG3Q9GZU2 1588 aa17.32■□□□□ 0.36
PAPD4-207ENST00000504233 RANGAP1P46060 587 aaPredicted RBP17.3■□□□□ 0.36
PAPD4-207ENST00000504233 SYNJ1O43426 1573 aa17.29■□□□□ 0.36
PAPD4-207ENST00000504233 EEA1Q15075 1411 aa17.29■□□□□ 0.36
PAPD4-207ENST00000504233 NEUROD1Q13562 356 aa17.28■□□□□ 0.36
PAPD4-207ENST00000504233 GOLGA3Q08378 1498 aa17.26■□□□□ 0.35
PAPD4-207ENST00000504233 GTF3C3Q9Y5Q9 886 aa17.26■□□□□ 0.35
PAPD4-207ENST00000504233 YTHDC1Q96MU7 727 aaKnown RBP17.2■□□□□ 0.34
PAPD4-207ENST00000504233 CEP164Q9UPV0 1460 aa17.15■□□□□ 0.34
PAPD4-207ENST00000504233 CLIP1P30622 1438 aa17.12■□□□□ 0.33
PAPD4-207ENST00000504233 RAPGEF2Q9Y4G8 1499 aa17.12■□□□□ 0.33
PAPD4-207ENST00000504233 HNRNPUL2Q1KMD3 747 aaKnown RBP17.1■□□□□ 0.33
PAPD4-207ENST00000504233 KIF21BO75037 1637 aa17.07■□□□□ 0.32
PAPD4-207ENST00000504233 ACIN1Q9UKV3 1341 aaKnown RBP17.07■□□□□ 0.32
PAPD4-207ENST00000504233 APLP2Q06481 763 aa17.03■□□□□ 0.32
PAPD4-207ENST00000504233 TOP2BQ02880 1626 aa17.01■□□□□ 0.31
PAPD4-207ENST00000504233 VPS8Q8N3P4 1428 aa16.99■□□□□ 0.31
PAPD4-207ENST00000504233 DIEXFQ68CQ4 756 aaKnown RBP16.96■□□□□ 0.31
PAPD4-207ENST00000504233 NCAPD3P42695 1498 aa16.96■□□□□ 0.3
PAPD4-207ENST00000504233 CUX1P39880 1505 aa16.92■□□□□ 0.3
PAPD4-207ENST00000504233 BIVM-ERCC5R4GMW8 1640 aa16.92■□□□□ 0.3
PAPD4-207ENST00000504233 HMGXB3Q12766 1538 aa16.91■□□□□ 0.3
PAPD4-207ENST00000504233 PRXQ9BXM0 1461 aa16.86■□□□□ 0.29
PAPD4-207ENST00000504233 CFTRP13569 1480 aa16.84■□□□□ 0.29
PAPD4-207ENST00000504233 KIF27Q86VH2 1401 aa16.83■□□□□ 0.29
PAPD4-207ENST00000504233 KANK4Q5T7N3 995 aaPredicted RBP16.83■□□□□ 0.28
PAPD4-207ENST00000504233 ARAP1Q96P48 1450 aa16.82■□□□□ 0.28
PAPD4-207ENST00000504233 ZNF316A6NFI3 1004 aaPredicted RBP16.81■□□□□ 0.28
PAPD4-207ENST00000504233 ERICH3Q5RHP9 1530 aa16.8■□□□□ 0.28
PAPD4-207ENST00000504233 CENPBP07199 599 aaPredicted RBP16.79■□□□□ 0.28
PAPD4-207ENST00000504233 MYT1Q01538 1121 aa16.76■□□□□ 0.27
PAPD4-207ENST00000504233 CUX2O14529 1486 aa16.74■□□□□ 0.27
PAPD4-207ENST00000504233 ITGAEP38570 1179 aa16.72■□□□□ 0.27
PAPD4-207ENST00000504233 SLC24A1O60721 1099 aa16.72■□□□□ 0.27
PAPD4-207ENST00000504233 CADPSQ9ULU8 1353 aa16.7■□□□□ 0.26
PAPD4-207ENST00000504233 ARHGAP35Q9NRY4 1499 aa16.68■□□□□ 0.26
PAPD4-207ENST00000504233 IGF1RP08069 1367 aa16.67■□□□□ 0.26
PAPD4-207ENST00000504233 FGD5Q6ZNL6 1462 aa16.65■□□□□ 0.26
PAPD4-207ENST00000504233 P3H3Q8IVL6 736 aa16.65■□□□□ 0.26
PAPD4-207ENST00000504233 MIER1Q8N108 512 aa16.64■□□□□ 0.25
PAPD4-207ENST00000504233 CC2D2AQ9P2K1 1620 aa16.62■□□□□ 0.25
PAPD4-207ENST00000504233 CARMIL1Q5VZK9 1371 aa16.62■□□□□ 0.25
PAPD4-207ENST00000504233 ATP1B4Q9UN42 357 aaPredicted RBP16.61■□□□□ 0.25
PAPD4-207ENST00000504233 DHX57Q6P158 1386 aaKnown RBP16.61■□□□□ 0.25
PAPD4-207ENST00000504233 PRDM2Q13029 1718 aa16.6■□□□□ 0.25
PAPD4-207ENST00000504233 FANCD2Q9BXW9 1451 aa16.56■□□□□ 0.24
PAPD4-207ENST00000504233 CCNB3Q8WWL7 1395 aa16.56■□□□□ 0.24
PAPD4-207ENST00000504233 RRBP1Q9P2E9 1410 aaKnown RBP16.55■□□□□ 0.24
PAPD4-207ENST00000504233 RAD54L2Q9Y4B4 1467 aa16.54■□□□□ 0.24
PAPD4-207ENST00000504233 NESP48681 1621 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms