Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CSNK1G1Q9HCP0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CSNK1G1Q9HCP0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.39■■□□□ 1.65
CSNK1G1Q9HCP0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
CSNK1G1Q9HCP0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.39■■□□□ 1.65
CSNK1G1Q9HCP0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CSNK1G1Q9HCP0 AC087393.1-201ENST00000582896 145 ntBASIC25.38■■□□□ 1.65
CSNK1G1Q9HCP0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CSNK1G1Q9HCP0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CSNK1G1Q9HCP0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CSNK1G1Q9HCP0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CSNK1G1Q9HCP0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
CSNK1G1Q9HCP0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
CSNK1G1Q9HCP0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC25.37■■□□□ 1.65
CSNK1G1Q9HCP0 RPS2P7-201ENST00000447334 885 ntBASIC25.37■■□□□ 1.65
CSNK1G1Q9HCP0 AC074183.2-201ENST00000623112 922 ntBASIC25.37■■□□□ 1.65
CSNK1G1Q9HCP0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CSNK1G1Q9HCP0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CSNK1G1Q9HCP0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CSNK1G1Q9HCP0 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CSNK1G1Q9HCP0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CSNK1G1Q9HCP0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.36■■□□□ 1.65
CSNK1G1Q9HCP0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.36■■□□□ 1.65
CSNK1G1Q9HCP0 HYI-210ENST00000486909 905 ntTSL 5 BASIC25.36■■□□□ 1.65
CSNK1G1Q9HCP0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CSNK1G1Q9HCP0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CSNK1G1Q9HCP0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.35■■□□□ 1.65
CSNK1G1Q9HCP0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.35■■□□□ 1.65
CSNK1G1Q9HCP0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CSNK1G1Q9HCP0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CSNK1G1Q9HCP0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CSNK1G1Q9HCP0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CSNK1G1Q9HCP0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CSNK1G1Q9HCP0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.34■■□□□ 1.65
CSNK1G1Q9HCP0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.33■■□□□ 1.65
CSNK1G1Q9HCP0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CSNK1G1Q9HCP0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.33■■□□□ 1.65
CSNK1G1Q9HCP0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CSNK1G1Q9HCP0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
CSNK1G1Q9HCP0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
CSNK1G1Q9HCP0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CSNK1G1Q9HCP0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.32■■□□□ 1.64
CSNK1G1Q9HCP0 AC139795.1-202ENST00000500444 432 ntBASIC25.32■■□□□ 1.64
CSNK1G1Q9HCP0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.32■■□□□ 1.64
CSNK1G1Q9HCP0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.32■■□□□ 1.64
CSNK1G1Q9HCP0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.31■■□□□ 1.64
CSNK1G1Q9HCP0 BHLHE23-202ENST00000612929 1109 ntBASIC25.31■■□□□ 1.64
CSNK1G1Q9HCP0 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CSNK1G1Q9HCP0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CSNK1G1Q9HCP0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CSNK1G1Q9HCP0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.3■■□□□ 1.64
CSNK1G1Q9HCP0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.3■■□□□ 1.64
CSNK1G1Q9HCP0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CSNK1G1Q9HCP0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CSNK1G1Q9HCP0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CSNK1G1Q9HCP0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CSNK1G1Q9HCP0 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CSNK1G1Q9HCP0 ERN1-208ENST00000606895 2068 ntBASIC25.29■■□□□ 1.64
CSNK1G1Q9HCP0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CSNK1G1Q9HCP0 AC019171.1-201ENST00000601251 1056 ntBASIC25.29■■□□□ 1.64
CSNK1G1Q9HCP0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CSNK1G1Q9HCP0 AC092803.2-201ENST00000564287 1899 ntBASIC25.29■■□□□ 1.64
CSNK1G1Q9HCP0 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.29■■□□□ 1.64
CSNK1G1Q9HCP0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.29■■□□□ 1.64
CSNK1G1Q9HCP0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.28■■□□□ 1.64
CSNK1G1Q9HCP0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
CSNK1G1Q9HCP0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC25.28■■□□□ 1.64
CSNK1G1Q9HCP0 AC010980.1-201ENST00000587192 1142 ntBASIC25.28■■□□□ 1.64
CSNK1G1Q9HCP0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CSNK1G1Q9HCP0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CSNK1G1Q9HCP0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
CSNK1G1Q9HCP0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.27■■□□□ 1.64
CSNK1G1Q9HCP0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
CSNK1G1Q9HCP0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CSNK1G1Q9HCP0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.27■■□□□ 1.64
CSNK1G1Q9HCP0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CSNK1G1Q9HCP0 LONRF2P2-201ENST00000439212 571 ntBASIC25.27■■□□□ 1.64
CSNK1G1Q9HCP0 PVT1_1.1-201ENST00000615125 194 ntBASIC25.27■■□□□ 1.64
CSNK1G1Q9HCP0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CSNK1G1Q9HCP0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.27■■□□□ 1.64
CSNK1G1Q9HCP0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CSNK1G1Q9HCP0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CSNK1G1Q9HCP0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
CSNK1G1Q9HCP0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.26■■□□□ 1.63
CSNK1G1Q9HCP0 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CSNK1G1Q9HCP0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.26■■□□□ 1.63
CSNK1G1Q9HCP0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CSNK1G1Q9HCP0 AC010501.1-201ENST00000606270 1962 ntBASIC25.25■■□□□ 1.63
CSNK1G1Q9HCP0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.25■■□□□ 1.63
CSNK1G1Q9HCP0 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
CSNK1G1Q9HCP0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
CSNK1G1Q9HCP0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
CSNK1G1Q9HCP0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
CSNK1G1Q9HCP0 AC096887.2-201ENST00000623443 1957 ntBASIC25.25■■□□□ 1.63
CSNK1G1Q9HCP0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CSNK1G1Q9HCP0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CSNK1G1Q9HCP0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.24■■□□□ 1.63
CSNK1G1Q9HCP0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CSNK1G1Q9HCP0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
CSNK1G1Q9HCP0 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms