Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COMMD4Q9H0A8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.06■□□□□ 0.96
COMMD4Q9H0A8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COMMD4Q9H0A8 AL359504.2-201ENST00000605506 1601 ntBASIC21.06■□□□□ 0.96
COMMD4Q9H0A8 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COMMD4Q9H0A8 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COMMD4Q9H0A8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.06■□□□□ 0.96
COMMD4Q9H0A8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COMMD4Q9H0A8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
COMMD4Q9H0A8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.05■□□□□ 0.96
COMMD4Q9H0A8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COMMD4Q9H0A8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COMMD4Q9H0A8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COMMD4Q9H0A8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
COMMD4Q9H0A8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
COMMD4Q9H0A8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
COMMD4Q9H0A8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COMMD4Q9H0A8 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COMMD4Q9H0A8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
COMMD4Q9H0A8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
COMMD4Q9H0A8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.04■□□□□ 0.96
COMMD4Q9H0A8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COMMD4Q9H0A8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
COMMD4Q9H0A8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
COMMD4Q9H0A8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.04■□□□□ 0.96
COMMD4Q9H0A8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.04■□□□□ 0.96
COMMD4Q9H0A8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COMMD4Q9H0A8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COMMD4Q9H0A8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COMMD4Q9H0A8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COMMD4Q9H0A8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COMMD4Q9H0A8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
COMMD4Q9H0A8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.03■□□□□ 0.96
COMMD4Q9H0A8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.03■□□□□ 0.96
COMMD4Q9H0A8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COMMD4Q9H0A8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.03■□□□□ 0.96
COMMD4Q9H0A8 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
COMMD4Q9H0A8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
COMMD4Q9H0A8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
COMMD4Q9H0A8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COMMD4Q9H0A8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
COMMD4Q9H0A8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.03■□□□□ 0.96
COMMD4Q9H0A8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COMMD4Q9H0A8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COMMD4Q9H0A8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COMMD4Q9H0A8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
COMMD4Q9H0A8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COMMD4Q9H0A8 DUX4L11-201ENST00000611504 1267 ntBASIC21.02■□□□□ 0.96
COMMD4Q9H0A8 DUX4L12-201ENST00000614593 1267 ntBASIC21.02■□□□□ 0.96
COMMD4Q9H0A8 DUX4L14-201ENST00000621227 1267 ntBASIC21.02■□□□□ 0.96
COMMD4Q9H0A8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
COMMD4Q9H0A8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
COMMD4Q9H0A8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COMMD4Q9H0A8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COMMD4Q9H0A8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COMMD4Q9H0A8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COMMD4Q9H0A8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COMMD4Q9H0A8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COMMD4Q9H0A8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COMMD4Q9H0A8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COMMD4Q9H0A8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COMMD4Q9H0A8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21■□□□□ 0.95
COMMD4Q9H0A8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21■□□□□ 0.95
COMMD4Q9H0A8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COMMD4Q9H0A8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.99■□□□□ 0.95
COMMD4Q9H0A8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COMMD4Q9H0A8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COMMD4Q9H0A8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.99■□□□□ 0.95
COMMD4Q9H0A8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.98■□□□□ 0.95
COMMD4Q9H0A8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COMMD4Q9H0A8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COMMD4Q9H0A8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COMMD4Q9H0A8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.98■□□□□ 0.95
COMMD4Q9H0A8 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.98■□□□□ 0.95
COMMD4Q9H0A8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.98■□□□□ 0.95
COMMD4Q9H0A8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.98■□□□□ 0.95
COMMD4Q9H0A8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COMMD4Q9H0A8 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COMMD4Q9H0A8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COMMD4Q9H0A8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.97■□□□□ 0.95
COMMD4Q9H0A8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COMMD4Q9H0A8 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COMMD4Q9H0A8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
COMMD4Q9H0A8 AP003733.4-201ENST00000623785 1697 ntBASIC20.97■□□□□ 0.95
COMMD4Q9H0A8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COMMD4Q9H0A8 HLA-V-202ENST00000446817 847 ntBASIC20.97■□□□□ 0.95
COMMD4Q9H0A8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
COMMD4Q9H0A8 AC126177.7-201ENST00000547904 679 ntBASIC20.97■□□□□ 0.95
COMMD4Q9H0A8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
COMMD4Q9H0A8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COMMD4Q9H0A8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COMMD4Q9H0A8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COMMD4Q9H0A8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COMMD4Q9H0A8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.96■□□□□ 0.95
COMMD4Q9H0A8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COMMD4Q9H0A8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.96■□□□□ 0.95
COMMD4Q9H0A8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COMMD4Q9H0A8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.95■□□□□ 0.94
COMMD4Q9H0A8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COMMD4Q9H0A8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms