Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
DDX1Q92499 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
DDX1Q92499 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
DDX1Q92499 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
DDX1Q92499 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
DDX1Q92499 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
DDX1Q92499 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
DDX1Q92499 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
DDX1Q92499 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
DDX1Q92499 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.68■■□□□ 1.7
DDX1Q92499 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.68■■□□□ 1.7
DDX1Q92499 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.68■■□□□ 1.7
DDX1Q92499 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
DDX1Q92499 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
DDX1Q92499 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
DDX1Q92499 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.67■■□□□ 1.7
DDX1Q92499 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
DDX1Q92499 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.67■■□□□ 1.7
DDX1Q92499 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.66■■□□□ 1.7
DDX1Q92499 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
DDX1Q92499 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.66■■□□□ 1.7
DDX1Q92499 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.66■■□□□ 1.7
DDX1Q92499 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
DDX1Q92499 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
DDX1Q92499 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
DDX1Q92499 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
DDX1Q92499 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
DDX1Q92499 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
DDX1Q92499 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.65■■□□□ 1.7
DDX1Q92499 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
DDX1Q92499 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
DDX1Q92499 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.65■■□□□ 1.7
DDX1Q92499 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
DDX1Q92499 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.64■■□□□ 1.7
DDX1Q92499 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.64■■□□□ 1.7
DDX1Q92499 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.64■■□□□ 1.7
DDX1Q92499 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.69
DDX1Q92499 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
DDX1Q92499 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
DDX1Q92499 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.63■■□□□ 1.69
DDX1Q92499 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
DDX1Q92499 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
DDX1Q92499 RP9P-202ENST00000450133 1212 ntBASIC25.63■■□□□ 1.69
DDX1Q92499 AC007029.1-201ENST00000604183 313 ntBASIC25.63■■□□□ 1.69
DDX1Q92499 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
DDX1Q92499 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
DDX1Q92499 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.63■■□□□ 1.69
DDX1Q92499 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
DDX1Q92499 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
DDX1Q92499 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.62■■□□□ 1.69
DDX1Q92499 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
DDX1Q92499 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.62■■□□□ 1.69
DDX1Q92499 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
DDX1Q92499 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
DDX1Q92499 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.61■■□□□ 1.69
DDX1Q92499 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
DDX1Q92499 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.61■■□□□ 1.69
DDX1Q92499 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
DDX1Q92499 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
DDX1Q92499 TSPY13P-201ENST00000338964 914 ntBASIC25.6■■□□□ 1.69
DDX1Q92499 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
DDX1Q92499 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.59■■□□□ 1.69
DDX1Q92499 AC093536.1-201ENST00000569153 554 ntBASIC25.59■■□□□ 1.69
DDX1Q92499 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.59■■□□□ 1.69
DDX1Q92499 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
DDX1Q92499 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
DDX1Q92499 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
DDX1Q92499 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.58■■□□□ 1.69
DDX1Q92499 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.58■■□□□ 1.69
DDX1Q92499 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.58■■□□□ 1.69
DDX1Q92499 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
DDX1Q92499 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
DDX1Q92499 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX1Q92499 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
DDX1Q92499 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
DDX1Q92499 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
DDX1Q92499 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX1Q92499 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.57■■□□□ 1.68
DDX1Q92499 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
DDX1Q92499 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.56■■□□□ 1.68
DDX1Q92499 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
DDX1Q92499 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
DDX1Q92499 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.55■■□□□ 1.68
DDX1Q92499 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.55■■□□□ 1.68
DDX1Q92499 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
DDX1Q92499 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
DDX1Q92499 RAP2CP1-202ENST00000605179 643 ntBASIC25.55■■□□□ 1.68
DDX1Q92499 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
DDX1Q92499 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
DDX1Q92499 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
DDX1Q92499 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
DDX1Q92499 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
DDX1Q92499 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.54■■□□□ 1.68
DDX1Q92499 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.54■■□□□ 1.68
DDX1Q92499 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.54■■□□□ 1.68
DDX1Q92499 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
DDX1Q92499 RARRES2P1-201ENST00000474487 481 ntBASIC25.53■■□□□ 1.68
DDX1Q92499 AC026202.3-201ENST00000600805 1127 ntBASIC25.53■■□□□ 1.68
DDX1Q92499 U85056.1-201ENST00000616429 682 ntBASIC25.53■■□□□ 1.68
DDX1Q92499 AC019069.1-201ENST00000610008 1333 ntBASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms