Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.7■□□□□ 0.74
THBS3P49746 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
THBS3P49746 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
THBS3P49746 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
THBS3P49746 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
THBS3P49746 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
THBS3P49746 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.69■□□□□ 0.74
THBS3P49746 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
THBS3P49746 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
THBS3P49746 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
THBS3P49746 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.69■□□□□ 0.74
THBS3P49746 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
THBS3P49746 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.69■□□□□ 0.74
THBS3P49746 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
THBS3P49746 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
THBS3P49746 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
THBS3P49746 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
THBS3P49746 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
THBS3P49746 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
THBS3P49746 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
THBS3P49746 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
THBS3P49746 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
THBS3P49746 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
THBS3P49746 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
THBS3P49746 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
THBS3P49746 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
THBS3P49746 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
THBS3P49746 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.67■□□□□ 0.74
THBS3P49746 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
THBS3P49746 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
THBS3P49746 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.66■□□□□ 0.74
THBS3P49746 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
THBS3P49746 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
THBS3P49746 GPX1-201ENST00000419349 1106 ntBASIC19.66■□□□□ 0.74
THBS3P49746 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.66■□□□□ 0.74
THBS3P49746 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
THBS3P49746 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
THBS3P49746 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
THBS3P49746 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
THBS3P49746 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
THBS3P49746 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
THBS3P49746 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
THBS3P49746 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
THBS3P49746 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
THBS3P49746 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
THBS3P49746 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.65■□□□□ 0.74
THBS3P49746 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
THBS3P49746 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
THBS3P49746 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
THBS3P49746 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
THBS3P49746 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
THBS3P49746 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
THBS3P49746 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
THBS3P49746 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.64■□□□□ 0.73
THBS3P49746 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
THBS3P49746 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
THBS3P49746 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
THBS3P49746 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.63■□□□□ 0.73
THBS3P49746 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.63■□□□□ 0.73
THBS3P49746 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.63■□□□□ 0.73
THBS3P49746 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.63■□□□□ 0.73
THBS3P49746 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.63■□□□□ 0.73
THBS3P49746 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
THBS3P49746 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
THBS3P49746 RARRES2P2-201ENST00000394842 485 ntBASIC19.62■□□□□ 0.73
THBS3P49746 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.62■□□□□ 0.73
THBS3P49746 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
THBS3P49746 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
THBS3P49746 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
THBS3P49746 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
THBS3P49746 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
THBS3P49746 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
THBS3P49746 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
THBS3P49746 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.61■□□□□ 0.73
THBS3P49746 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.61■□□□□ 0.73
THBS3P49746 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
THBS3P49746 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
THBS3P49746 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
THBS3P49746 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
THBS3P49746 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
THBS3P49746 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.6■□□□□ 0.73
THBS3P49746 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
THBS3P49746 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
THBS3P49746 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
THBS3P49746 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
THBS3P49746 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
THBS3P49746 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
THBS3P49746 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
THBS3P49746 AC096887.2-201ENST00000623443 1957 ntBASIC19.59■□□□□ 0.73
THBS3P49746 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
THBS3P49746 RNF126P1-201ENST00000567452 1320 ntBASIC19.59■□□□□ 0.73
THBS3P49746 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.59■□□□□ 0.73
THBS3P49746 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
THBS3P49746 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.59■□□□□ 0.73
THBS3P49746 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.59■□□□□ 0.73
THBS3P49746 AC022413.1-201ENST00000624602 984 ntBASIC19.59■□□□□ 0.73
THBS3P49746 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
THBS3P49746 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
THBS3P49746 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
THBS3P49746 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms