Protein–RNA interactions for Protein: P35713

SOX18, Transcription factor SOX-18, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18P35713 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SOX18P35713 AC009831.1-201ENST00000580420 1582 ntBASIC22.55■■□□□ 1.2
SOX18P35713 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
SOX18P35713 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SOX18P35713 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SOX18P35713 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SOX18P35713 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SOX18P35713 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SOX18P35713 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SOX18P35713 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SOX18P35713 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SOX18P35713 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SOX18P35713 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SOX18P35713 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SOX18P35713 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SOX18P35713 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SOX18P35713 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.52■■□□□ 1.2
SOX18P35713 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SOX18P35713 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SOX18P35713 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SOX18P35713 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.51■■□□□ 1.19
SOX18P35713 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SOX18P35713 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
SOX18P35713 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SOX18P35713 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SOX18P35713 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SOX18P35713 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SOX18P35713 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.49■■□□□ 1.19
SOX18P35713 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SOX18P35713 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SOX18P35713 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SOX18P35713 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.48■■□□□ 1.19
SOX18P35713 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SOX18P35713 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SOX18P35713 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
SOX18P35713 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SOX18P35713 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
SOX18P35713 U85056.1-201ENST00000616429 682 ntBASIC22.48■■□□□ 1.19
SOX18P35713 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.48■■□□□ 1.19
SOX18P35713 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.48■■□□□ 1.19
SOX18P35713 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SOX18P35713 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SOX18P35713 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SOX18P35713 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SOX18P35713 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SOX18P35713 AC133552.2-201ENST00000619106 1032 ntBASIC22.47■■□□□ 1.19
SOX18P35713 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
SOX18P35713 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SOX18P35713 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SOX18P35713 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SOX18P35713 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SOX18P35713 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SOX18P35713 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SOX18P35713 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.46■■□□□ 1.19
SOX18P35713 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
SOX18P35713 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SOX18P35713 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.45■■□□□ 1.18
SOX18P35713 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SOX18P35713 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SOX18P35713 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.45■■□□□ 1.18
SOX18P35713 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SOX18P35713 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
SOX18P35713 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SOX18P35713 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.44■■□□□ 1.18
SOX18P35713 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.44■■□□□ 1.18
SOX18P35713 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.44■■□□□ 1.18
SOX18P35713 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SOX18P35713 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
SOX18P35713 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.43■■□□□ 1.18
SOX18P35713 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SOX18P35713 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SOX18P35713 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
SOX18P35713 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SOX18P35713 AL592293.1-201ENST00000502889 1188 ntBASIC22.43■■□□□ 1.18
SOX18P35713 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SOX18P35713 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.43■■□□□ 1.18
SOX18P35713 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SOX18P35713 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SOX18P35713 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.42■■□□□ 1.18
SOX18P35713 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SOX18P35713 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SOX18P35713 SPCS2P3-201ENST00000500401 656 ntBASIC22.42■■□□□ 1.18
SOX18P35713 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SOX18P35713 ABHD17AP5-201ENST00000580133 923 ntBASIC22.42■■□□□ 1.18
SOX18P35713 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.42■■□□□ 1.18
SOX18P35713 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.42■■□□□ 1.18
SOX18P35713 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SOX18P35713 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SOX18P35713 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SOX18P35713 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SOX18P35713 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SOX18P35713 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SOX18P35713 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.41■■□□□ 1.18
SOX18P35713 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SOX18P35713 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.4■■□□□ 1.18
SOX18P35713 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
SOX18P35713 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SOX18P35713 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.4■■□□□ 1.18
SOX18P35713 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.39■■□□□ 1.18
SOX18P35713 AC020928.2-201ENST00000588717 2197 ntBASIC22.39■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms