Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFRSF1AP19438 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TNFRSF1AP19438 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFRSF1AP19438 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFRSF1AP19438 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
TNFRSF1AP19438 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFRSF1AP19438 AC139795.1-202ENST00000500444 432 ntBASIC20.35■□□□□ 0.85
TNFRSF1AP19438 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
TNFRSF1AP19438 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TNFRSF1AP19438 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TNFRSF1AP19438 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF1AP19438 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF1AP19438 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.34■□□□□ 0.85
TNFRSF1AP19438 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.34■□□□□ 0.85
TNFRSF1AP19438 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.34■□□□□ 0.85
TNFRSF1AP19438 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF1AP19438 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.34■□□□□ 0.85
TNFRSF1AP19438 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.34■□□□□ 0.85
TNFRSF1AP19438 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TNFRSF1AP19438 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TNFRSF1AP19438 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TNFRSF1AP19438 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.33■□□□□ 0.85
TNFRSF1AP19438 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TNFRSF1AP19438 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TNFRSF1AP19438 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.33■□□□□ 0.85
TNFRSF1AP19438 BHLHE23-202ENST00000612929 1109 ntBASIC20.33■□□□□ 0.85
TNFRSF1AP19438 AC074183.2-201ENST00000623112 922 ntBASIC20.33■□□□□ 0.85
TNFRSF1AP19438 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TNFRSF1AP19438 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF1AP19438 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.32■□□□□ 0.84
TNFRSF1AP19438 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.32■□□□□ 0.84
TNFRSF1AP19438 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
TNFRSF1AP19438 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF1AP19438 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF1AP19438 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF1AP19438 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TNFRSF1AP19438 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF1AP19438 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF1AP19438 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF1AP19438 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF1AP19438 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF1AP19438 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.31■□□□□ 0.84
TNFRSF1AP19438 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TNFRSF1AP19438 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.31■□□□□ 0.84
TNFRSF1AP19438 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.31■□□□□ 0.84
TNFRSF1AP19438 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF1AP19438 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.31■□□□□ 0.84
TNFRSF1AP19438 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF1AP19438 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF1AP19438 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF1AP19438 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF1AP19438 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TNFRSF1AP19438 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF1AP19438 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF1AP19438 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF1AP19438 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.3■□□□□ 0.84
TNFRSF1AP19438 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF1AP19438 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF1AP19438 AC092803.2-201ENST00000564287 1899 ntBASIC20.3■□□□□ 0.84
TNFRSF1AP19438 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.3■□□□□ 0.84
TNFRSF1AP19438 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF1AP19438 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF1AP19438 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF1AP19438 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF1AP19438 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF1AP19438 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF1AP19438 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF1AP19438 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TNFRSF1AP19438 RPS2P7-201ENST00000447334 885 ntBASIC20.29■□□□□ 0.84
TNFRSF1AP19438 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF1AP19438 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF1AP19438 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFRSF1AP19438 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.28■□□□□ 0.84
TNFRSF1AP19438 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFRSF1AP19438 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.28■□□□□ 0.84
TNFRSF1AP19438 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFRSF1AP19438 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFRSF1AP19438 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFRSF1AP19438 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.27■□□□□ 0.84
TNFRSF1AP19438 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFRSF1AP19438 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TNFRSF1AP19438 AC087393.1-201ENST00000582896 145 ntBASIC20.27■□□□□ 0.84
TNFRSF1AP19438 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.27■□□□□ 0.84
TNFRSF1AP19438 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.27■□□□□ 0.84
TNFRSF1AP19438 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFRSF1AP19438 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
TNFRSF1AP19438 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.26■□□□□ 0.83
TNFRSF1AP19438 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TNFRSF1AP19438 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFRSF1AP19438 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFRSF1AP19438 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFRSF1AP19438 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
TNFRSF1AP19438 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFRSF1AP19438 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.25■□□□□ 0.83
TNFRSF1AP19438 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFRSF1AP19438 AC010501.1-201ENST00000606270 1962 ntBASIC20.25■□□□□ 0.83
TNFRSF1AP19438 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNFRSF1AP19438 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.24■□□□□ 0.83
TNFRSF1AP19438 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TNFRSF1AP19438 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms