Protein–RNA interactions for Protein: O75888

TNFSF13, Tumor necrosis factor ligand superfamily member 13, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13O75888 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.28■■□□□ 1
TNFSF13O75888 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNFSF13O75888 AC103724.3-201ENST00000564481 992 ntBASIC21.28■■□□□ 1
TNFSF13O75888 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.28■■□□□ 1
TNFSF13O75888 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TNFSF13O75888 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
TNFSF13O75888 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNFSF13O75888 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.28■■□□□ 1
TNFSF13O75888 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.28■■□□□ 1
TNFSF13O75888 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
TNFSF13O75888 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TNFSF13O75888 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TNFSF13O75888 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.27■■□□□ 1
TNFSF13O75888 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TNFSF13O75888 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.27■■□□□ 1
TNFSF13O75888 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TNFSF13O75888 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TNFSF13O75888 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TNFSF13O75888 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TNFSF13O75888 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.26■□□□□ 0.99
TNFSF13O75888 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TNFSF13O75888 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFSF13O75888 AC009299.2-201ENST00000482477 511 ntBASIC21.26■□□□□ 0.99
TNFSF13O75888 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFSF13O75888 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFSF13O75888 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFSF13O75888 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TNFSF13O75888 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.25■□□□□ 0.99
TNFSF13O75888 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFSF13O75888 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFSF13O75888 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TNFSF13O75888 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TNFSF13O75888 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.25■□□□□ 0.99
TNFSF13O75888 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.25■□□□□ 0.99
TNFSF13O75888 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.25■□□□□ 0.99
TNFSF13O75888 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TNFSF13O75888 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFSF13O75888 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TNFSF13O75888 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TNFSF13O75888 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.24■□□□□ 0.99
TNFSF13O75888 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.24■□□□□ 0.99
TNFSF13O75888 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TNFSF13O75888 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TNFSF13O75888 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFSF13O75888 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFSF13O75888 AL031848.2-201ENST00000607670 837 ntBASIC21.23■□□□□ 0.99
TNFSF13O75888 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFSF13O75888 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TNFSF13O75888 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.22■□□□□ 0.99
TNFSF13O75888 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.22■□□□□ 0.99
TNFSF13O75888 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.22■□□□□ 0.99
TNFSF13O75888 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.22■□□□□ 0.99
TNFSF13O75888 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TNFSF13O75888 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF13O75888 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF13O75888 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.21■□□□□ 0.99
TNFSF13O75888 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.21■□□□□ 0.99
TNFSF13O75888 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.21■□□□□ 0.99
TNFSF13O75888 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF13O75888 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF13O75888 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF13O75888 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
TNFSF13O75888 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
TNFSF13O75888 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.2■□□□□ 0.98
TNFSF13O75888 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TNFSF13O75888 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TNFSF13O75888 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TNFSF13O75888 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TNFSF13O75888 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFSF13O75888 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFSF13O75888 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFSF13O75888 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.17■□□□□ 0.98
TNFSF13O75888 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFSF13O75888 AC022616.5-201ENST00000518796 181 ntBASIC21.17■□□□□ 0.98
TNFSF13O75888 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TNFSF13O75888 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFSF13O75888 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.17■□□□□ 0.98
TNFSF13O75888 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TNFSF13O75888 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.16■□□□□ 0.98
TNFSF13O75888 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TNFSF13O75888 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF13O75888 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.16■□□□□ 0.98
TNFSF13O75888 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF13O75888 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TNFSF13O75888 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF13O75888 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.15■□□□□ 0.98
TNFSF13O75888 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TNFSF13O75888 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TNFSF13O75888 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TNFSF13O75888 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TNFSF13O75888 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TNFSF13O75888 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TNFSF13O75888 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TNFSF13O75888 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TNFSF13O75888 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TNFSF13O75888 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.15■□□□□ 0.98
TNFSF13O75888 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TNFSF13O75888 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TNFSF13O75888 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TNFSF13O75888 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms