Protein–RNA interactions for Protein: A6NEW6

FAM90A16P, Putative protein FAM90A16P/FAM90A17P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A16PA6NEW6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.24■□□□□ 0.83
FAM90A16PA6NEW6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.24■□□□□ 0.83
FAM90A16PA6NEW6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FAM90A16PA6NEW6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FAM90A16PA6NEW6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
FAM90A16PA6NEW6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FAM90A16PA6NEW6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
FAM90A16PA6NEW6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FAM90A16PA6NEW6 AC097639.1-201ENST00000565519 1891 ntBASIC20.23■□□□□ 0.83
FAM90A16PA6NEW6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
FAM90A16PA6NEW6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.23■□□□□ 0.83
FAM90A16PA6NEW6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FAM90A16PA6NEW6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FAM90A16PA6NEW6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
FAM90A16PA6NEW6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.23■□□□□ 0.83
FAM90A16PA6NEW6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FAM90A16PA6NEW6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FAM90A16PA6NEW6 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.22■□□□□ 0.83
FAM90A16PA6NEW6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FAM90A16PA6NEW6 AC138932.3-201ENST00000567634 1902 ntBASIC20.21■□□□□ 0.83
FAM90A16PA6NEW6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FAM90A16PA6NEW6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.21■□□□□ 0.83
FAM90A16PA6NEW6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
FAM90A16PA6NEW6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
FAM90A16PA6NEW6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FAM90A16PA6NEW6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FAM90A16PA6NEW6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FAM90A16PA6NEW6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FAM90A16PA6NEW6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FAM90A16PA6NEW6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
FAM90A16PA6NEW6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FAM90A16PA6NEW6 MIR4449-201ENST00000578365 66 ntBASIC20.2■□□□□ 0.82
FAM90A16PA6NEW6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
FAM90A16PA6NEW6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
FAM90A16PA6NEW6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FAM90A16PA6NEW6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.2■□□□□ 0.82
FAM90A16PA6NEW6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FAM90A16PA6NEW6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
FAM90A16PA6NEW6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FAM90A16PA6NEW6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.19■□□□□ 0.82
FAM90A16PA6NEW6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FAM90A16PA6NEW6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FAM90A16PA6NEW6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
FAM90A16PA6NEW6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.18■□□□□ 0.82
FAM90A16PA6NEW6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FAM90A16PA6NEW6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.18■□□□□ 0.82
FAM90A16PA6NEW6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FAM90A16PA6NEW6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.18■□□□□ 0.82
FAM90A16PA6NEW6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FAM90A16PA6NEW6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FAM90A16PA6NEW6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FAM90A16PA6NEW6 AP003733.4-201ENST00000623785 1697 ntBASIC20.17■□□□□ 0.82
FAM90A16PA6NEW6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FAM90A16PA6NEW6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FAM90A16PA6NEW6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
FAM90A16PA6NEW6 AC025884.2-201ENST00000553429 711 ntBASIC20.17■□□□□ 0.82
FAM90A16PA6NEW6 AL139125.2-201ENST00000623134 1869 ntBASIC20.17■□□□□ 0.82
FAM90A16PA6NEW6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.16■□□□□ 0.82
FAM90A16PA6NEW6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FAM90A16PA6NEW6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FAM90A16PA6NEW6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.16■□□□□ 0.82
FAM90A16PA6NEW6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.16■□□□□ 0.82
FAM90A16PA6NEW6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
FAM90A16PA6NEW6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FAM90A16PA6NEW6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
FAM90A16PA6NEW6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FAM90A16PA6NEW6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FAM90A16PA6NEW6 AL157400.5-201ENST00000507624 621 ntBASIC20.15■□□□□ 0.82
FAM90A16PA6NEW6 MIR3960-201ENST00000583311 91 ntBASIC20.15■□□□□ 0.82
FAM90A16PA6NEW6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.15■□□□□ 0.82
FAM90A16PA6NEW6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FAM90A16PA6NEW6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.15■□□□□ 0.82
FAM90A16PA6NEW6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FAM90A16PA6NEW6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FAM90A16PA6NEW6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FAM90A16PA6NEW6 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FAM90A16PA6NEW6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FAM90A16PA6NEW6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
FAM90A16PA6NEW6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.13■□□□□ 0.81
FAM90A16PA6NEW6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.13■□□□□ 0.81
FAM90A16PA6NEW6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FAM90A16PA6NEW6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.13■□□□□ 0.81
FAM90A16PA6NEW6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.13■□□□□ 0.81
FAM90A16PA6NEW6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.13■□□□□ 0.81
FAM90A16PA6NEW6 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.13■□□□□ 0.81
FAM90A16PA6NEW6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
FAM90A16PA6NEW6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FAM90A16PA6NEW6 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FAM90A16PA6NEW6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
FAM90A16PA6NEW6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FAM90A16PA6NEW6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
FAM90A16PA6NEW6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FAM90A16PA6NEW6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FAM90A16PA6NEW6 AC060814.1-201ENST00000554326 538 ntBASIC20.12■□□□□ 0.81
FAM90A16PA6NEW6 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FAM90A16PA6NEW6 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
FAM90A16PA6NEW6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FAM90A16PA6NEW6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
FAM90A16PA6NEW6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.11■□□□□ 0.81
FAM90A16PA6NEW6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms