Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
LOC102724428A0A0B4J2F2 TSPY9P-201ENST00000440215 945 ntBASIC31.17■■■□□ 2.58
LOC102724428A0A0B4J2F2 TSPY11P-201ENST00000442607 1045 ntBASIC31.17■■■□□ 2.58
LOC102724428A0A0B4J2F2 AC120024.1-201ENST00000562672 995 ntBASIC31.17■■■□□ 2.58
LOC102724428A0A0B4J2F2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC31.17■■■□□ 2.58
LOC102724428A0A0B4J2F2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
LOC102724428A0A0B4J2F2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
LOC102724428A0A0B4J2F2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
LOC102724428A0A0B4J2F2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
LOC102724428A0A0B4J2F2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
LOC102724428A0A0B4J2F2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC31.15■■■□□ 2.58
LOC102724428A0A0B4J2F2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC31.15■■■□□ 2.58
LOC102724428A0A0B4J2F2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC31.15■■■□□ 2.58
LOC102724428A0A0B4J2F2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC31.15■■■□□ 2.58
LOC102724428A0A0B4J2F2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
LOC102724428A0A0B4J2F2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
LOC102724428A0A0B4J2F2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
LOC102724428A0A0B4J2F2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.57
LOC102724428A0A0B4J2F2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
LOC102724428A0A0B4J2F2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
LOC102724428A0A0B4J2F2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
LOC102724428A0A0B4J2F2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
LOC102724428A0A0B4J2F2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
LOC102724428A0A0B4J2F2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
LOC102724428A0A0B4J2F2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
LOC102724428A0A0B4J2F2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
LOC102724428A0A0B4J2F2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC31.12■■■□□ 2.57
LOC102724428A0A0B4J2F2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
LOC102724428A0A0B4J2F2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC31.11■■■□□ 2.57
LOC102724428A0A0B4J2F2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
LOC102724428A0A0B4J2F2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC31.11■■■□□ 2.57
LOC102724428A0A0B4J2F2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
LOC102724428A0A0B4J2F2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC31.11■■■□□ 2.57
LOC102724428A0A0B4J2F2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC31.11■■■□□ 2.57
LOC102724428A0A0B4J2F2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC31.11■■■□□ 2.57
LOC102724428A0A0B4J2F2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC31.11■■■□□ 2.57
LOC102724428A0A0B4J2F2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC31.1■■■□□ 2.57
LOC102724428A0A0B4J2F2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC31.1■■■□□ 2.57
LOC102724428A0A0B4J2F2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
LOC102724428A0A0B4J2F2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
LOC102724428A0A0B4J2F2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC31.09■■■□□ 2.57
LOC102724428A0A0B4J2F2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
LOC102724428A0A0B4J2F2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
LOC102724428A0A0B4J2F2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.09■■■□□ 2.57
LOC102724428A0A0B4J2F2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
LOC102724428A0A0B4J2F2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
LOC102724428A0A0B4J2F2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
LOC102724428A0A0B4J2F2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
LOC102724428A0A0B4J2F2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC31.08■■■□□ 2.57
LOC102724428A0A0B4J2F2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
LOC102724428A0A0B4J2F2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
LOC102724428A0A0B4J2F2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC31.08■■■□□ 2.57
LOC102724428A0A0B4J2F2 AC092028.1-203ENST00000608262 953 ntBASIC31.08■■■□□ 2.57
LOC102724428A0A0B4J2F2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC31.07■■■□□ 2.56
LOC102724428A0A0B4J2F2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC31.07■■■□□ 2.56
LOC102724428A0A0B4J2F2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
LOC102724428A0A0B4J2F2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
LOC102724428A0A0B4J2F2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
LOC102724428A0A0B4J2F2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC31.06■■■□□ 2.56
LOC102724428A0A0B4J2F2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC31.06■■■□□ 2.56
LOC102724428A0A0B4J2F2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC31.06■■■□□ 2.56
LOC102724428A0A0B4J2F2 AC131281.2-201ENST00000520478 145 ntBASIC31.06■■■□□ 2.56
LOC102724428A0A0B4J2F2 AL139246.5-201ENST00000606645 996 ntBASIC31.06■■■□□ 2.56
LOC102724428A0A0B4J2F2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
LOC102724428A0A0B4J2F2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
LOC102724428A0A0B4J2F2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC31.05■■■□□ 2.56
LOC102724428A0A0B4J2F2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC31.05■■■□□ 2.56
LOC102724428A0A0B4J2F2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
LOC102724428A0A0B4J2F2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC31.04■■■□□ 2.56
LOC102724428A0A0B4J2F2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC31.04■■■□□ 2.56
LOC102724428A0A0B4J2F2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
LOC102724428A0A0B4J2F2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC31.04■■■□□ 2.56
LOC102724428A0A0B4J2F2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
LOC102724428A0A0B4J2F2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
LOC102724428A0A0B4J2F2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
LOC102724428A0A0B4J2F2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
LOC102724428A0A0B4J2F2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC31.03■■■□□ 2.56
LOC102724428A0A0B4J2F2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
LOC102724428A0A0B4J2F2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC31.03■■■□□ 2.56
LOC102724428A0A0B4J2F2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC31.03■■■□□ 2.56
LOC102724428A0A0B4J2F2 BX255925.1-201ENST00000566954 1854 ntBASIC31.02■■■□□ 2.56
LOC102724428A0A0B4J2F2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC31.02■■■□□ 2.56
LOC102724428A0A0B4J2F2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC31.02■■■□□ 2.56
LOC102724428A0A0B4J2F2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
LOC102724428A0A0B4J2F2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC31.02■■■□□ 2.56
LOC102724428A0A0B4J2F2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC31.01■■■□□ 2.55
LOC102724428A0A0B4J2F2 RALB-208ENST00000631312 311 ntTSL 5 BASIC31.01■■■□□ 2.55
LOC102724428A0A0B4J2F2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
LOC102724428A0A0B4J2F2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
LOC102724428A0A0B4J2F2 DRD5P2-201ENST00000421395 2012 ntBASIC31■■■□□ 2.55
LOC102724428A0A0B4J2F2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC31■■■□□ 2.55
LOC102724428A0A0B4J2F2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC31■■■□□ 2.55
LOC102724428A0A0B4J2F2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
LOC102724428A0A0B4J2F2 SRR-208ENST00000576848 588 ntTSL 4 BASIC30.99■■■□□ 2.55
LOC102724428A0A0B4J2F2 MIR4281-201ENST00000580852 62 ntBASIC30.99■■■□□ 2.55
LOC102724428A0A0B4J2F2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
LOC102724428A0A0B4J2F2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
LOC102724428A0A0B4J2F2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
LOC102724428A0A0B4J2F2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
LOC102724428A0A0B4J2F2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms