Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRGV1A0A0A0MS02 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRGV1A0A0A0MS02 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRGV1A0A0A0MS02 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRGV1A0A0A0MS02 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRGV1A0A0A0MS02 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TRGV1A0A0A0MS02 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRGV1A0A0A0MS02 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRGV1A0A0A0MS02 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRGV1A0A0A0MS02 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRGV1A0A0A0MS02 ECEL1P2-201ENST00000461596 1295 ntBASIC17.34■□□□□ 0.37
TRGV1A0A0A0MS02 AC025884.2-201ENST00000553429 711 ntBASIC17.34■□□□□ 0.37
TRGV1A0A0A0MS02 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRGV1A0A0A0MS02 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRGV1A0A0A0MS02 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRGV1A0A0A0MS02 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.33■□□□□ 0.37
TRGV1A0A0A0MS02 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRGV1A0A0A0MS02 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRGV1A0A0A0MS02 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.33■□□□□ 0.37
TRGV1A0A0A0MS02 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC17.33■□□□□ 0.37
TRGV1A0A0A0MS02 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV1A0A0A0MS02 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV1A0A0A0MS02 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV1A0A0A0MS02 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV1A0A0A0MS02 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.33■□□□□ 0.36
TRGV1A0A0A0MS02 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
TRGV1A0A0A0MS02 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV1A0A0A0MS02 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV1A0A0A0MS02 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV1A0A0A0MS02 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV1A0A0A0MS02 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV1A0A0A0MS02 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRGV1A0A0A0MS02 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRGV1A0A0A0MS02 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.32■□□□□ 0.36
TRGV1A0A0A0MS02 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV1A0A0A0MS02 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV1A0A0A0MS02 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV1A0A0A0MS02 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV1A0A0A0MS02 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRGV1A0A0A0MS02 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV1A0A0A0MS02 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.31■□□□□ 0.36
TRGV1A0A0A0MS02 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV1A0A0A0MS02 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV1A0A0A0MS02 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV1A0A0A0MS02 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV1A0A0A0MS02 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV1A0A0A0MS02 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRGV1A0A0A0MS02 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.3■□□□□ 0.36
TRGV1A0A0A0MS02 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV1A0A0A0MS02 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TRGV1A0A0A0MS02 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.3■□□□□ 0.36
TRGV1A0A0A0MS02 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.3■□□□□ 0.36
TRGV1A0A0A0MS02 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRGV1A0A0A0MS02 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.3■□□□□ 0.36
TRGV1A0A0A0MS02 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV1A0A0A0MS02 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRGV1A0A0A0MS02 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRGV1A0A0A0MS02 ABHD17AP3-201ENST00000503096 1137 ntBASIC17.29■□□□□ 0.36
TRGV1A0A0A0MS02 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV1A0A0A0MS02 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TRGV1A0A0A0MS02 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV1A0A0A0MS02 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV1A0A0A0MS02 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV1A0A0A0MS02 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
TRGV1A0A0A0MS02 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV1A0A0A0MS02 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.28■□□□□ 0.36
TRGV1A0A0A0MS02 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.28■□□□□ 0.36
TRGV1A0A0A0MS02 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV1A0A0A0MS02 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRGV1A0A0A0MS02 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV1A0A0A0MS02 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.28■□□□□ 0.36
TRGV1A0A0A0MS02 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.28■□□□□ 0.36
TRGV1A0A0A0MS02 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.28■□□□□ 0.36
TRGV1A0A0A0MS02 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.28■□□□□ 0.36
TRGV1A0A0A0MS02 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV1A0A0A0MS02 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.28■□□□□ 0.36
TRGV1A0A0A0MS02 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TRGV1A0A0A0MS02 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRGV1A0A0A0MS02 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.27■□□□□ 0.35
TRGV1A0A0A0MS02 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRGV1A0A0A0MS02 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRGV1A0A0A0MS02 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV1A0A0A0MS02 AC020928.2-201ENST00000588717 2197 ntBASIC17.26■□□□□ 0.35
TRGV1A0A0A0MS02 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV1A0A0A0MS02 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV1A0A0A0MS02 RP9P-202ENST00000450133 1212 ntBASIC17.26■□□□□ 0.35
TRGV1A0A0A0MS02 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC17.26■□□□□ 0.35
TRGV1A0A0A0MS02 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV1A0A0A0MS02 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV1A0A0A0MS02 AC096887.2-201ENST00000623443 1957 ntBASIC17.26■□□□□ 0.35
TRGV1A0A0A0MS02 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV1A0A0A0MS02 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TRGV1A0A0A0MS02 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC17.25■□□□□ 0.35
TRGV1A0A0A0MS02 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRGV1A0A0A0MS02 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRGV1A0A0A0MS02 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.25■□□□□ 0.35
TRGV1A0A0A0MS02 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.25■□□□□ 0.35
TRGV1A0A0A0MS02 AC093536.1-201ENST00000569153 554 ntBASIC17.25■□□□□ 0.35
TRGV1A0A0A0MS02 AC007029.1-201ENST00000604183 313 ntBASIC17.25■□□□□ 0.35
TRGV1A0A0A0MS02 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms