Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.09■□□□□ 0.81
CLCC1Q96S66 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLCC1Q96S66 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CLCC1Q96S66 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.09■□□□□ 0.81
CLCC1Q96S66 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CLCC1Q96S66 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.09■□□□□ 0.81
CLCC1Q96S66 DUX4L11-201ENST00000611504 1267 ntBASIC20.09■□□□□ 0.81
CLCC1Q96S66 DUX4L12-201ENST00000614593 1267 ntBASIC20.09■□□□□ 0.81
CLCC1Q96S66 DUX4L14-201ENST00000621227 1267 ntBASIC20.09■□□□□ 0.81
CLCC1Q96S66 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLCC1Q96S66 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CLCC1Q96S66 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLCC1Q96S66 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLCC1Q96S66 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.08■□□□□ 0.81
CLCC1Q96S66 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.08■□□□□ 0.8
CLCC1Q96S66 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLCC1Q96S66 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLCC1Q96S66 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCC1Q96S66 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCC1Q96S66 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLCC1Q96S66 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLCC1Q96S66 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CLCC1Q96S66 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCC1Q96S66 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCC1Q96S66 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCC1Q96S66 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCC1Q96S66 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.06■□□□□ 0.8
CLCC1Q96S66 DUX4L13-201ENST00000554103 1267 ntBASIC20.06■□□□□ 0.8
CLCC1Q96S66 DUX4L15-201ENST00000611059 1267 ntBASIC20.06■□□□□ 0.8
CLCC1Q96S66 DUX4L23-201ENST00000615195 1269 ntBASIC20.06■□□□□ 0.8
CLCC1Q96S66 DUX4L24-201ENST00000617576 1269 ntBASIC20.06■□□□□ 0.8
CLCC1Q96S66 DUX4L22-201ENST00000618238 1269 ntBASIC20.06■□□□□ 0.8
CLCC1Q96S66 DUX4L20-201ENST00000619712 1269 ntBASIC20.06■□□□□ 0.8
CLCC1Q96S66 DUX4L21-201ENST00000622058 1269 ntBASIC20.06■□□□□ 0.8
CLCC1Q96S66 DUX4L10-201ENST00000622460 1267 ntBASIC20.06■□□□□ 0.8
CLCC1Q96S66 DUX4L25-201ENST00000624915 1269 ntBASIC20.06■□□□□ 0.8
CLCC1Q96S66 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.06■□□□□ 0.8
CLCC1Q96S66 AC145676.1-201ENST00000514988 2004 ntBASIC20.05■□□□□ 0.8
CLCC1Q96S66 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCC1Q96S66 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCC1Q96S66 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLCC1Q96S66 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCC1Q96S66 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.05■□□□□ 0.8
CLCC1Q96S66 AC133561.1-201ENST00000568600 2415 ntBASIC20.05■□□□□ 0.8
CLCC1Q96S66 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.05■□□□□ 0.8
CLCC1Q96S66 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCC1Q96S66 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCC1Q96S66 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CLCC1Q96S66 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.04■□□□□ 0.8
CLCC1Q96S66 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCC1Q96S66 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCC1Q96S66 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCC1Q96S66 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLCC1Q96S66 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCC1Q96S66 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCC1Q96S66 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.02■□□□□ 0.8
CLCC1Q96S66 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CLCC1Q96S66 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CLCC1Q96S66 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLCC1Q96S66 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.8
CLCC1Q96S66 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLCC1Q96S66 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCC1Q96S66 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCC1Q96S66 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLCC1Q96S66 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CLCC1Q96S66 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CLCC1Q96S66 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLCC1Q96S66 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.01■□□□□ 0.79
CLCC1Q96S66 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.01■□□□□ 0.79
CLCC1Q96S66 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.01■□□□□ 0.79
CLCC1Q96S66 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.01■□□□□ 0.79
CLCC1Q96S66 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCC1Q96S66 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCC1Q96S66 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CLCC1Q96S66 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLCC1Q96S66 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20■□□□□ 0.79
CLCC1Q96S66 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20■□□□□ 0.79
CLCC1Q96S66 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCC1Q96S66 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLCC1Q96S66 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20■□□□□ 0.79
CLCC1Q96S66 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20■□□□□ 0.79
CLCC1Q96S66 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.99■□□□□ 0.79
CLCC1Q96S66 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.99■□□□□ 0.79
CLCC1Q96S66 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCC1Q96S66 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.99■□□□□ 0.79
CLCC1Q96S66 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCC1Q96S66 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CLCC1Q96S66 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCC1Q96S66 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLCC1Q96S66 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLCC1Q96S66 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLCC1Q96S66 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CLCC1Q96S66 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCC1Q96S66 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCC1Q96S66 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCC1Q96S66 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCC1Q96S66 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCC1Q96S66 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCC1Q96S66 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.98■□□□□ 0.79
CLCC1Q96S66 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms