RNA–Protein interactions for RNA: ENST00000294304.11

LRP5-201, Transcript of LDL receptor related protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP5, Length 5,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP5-201ENST00000294304 NISCHQ9Y2I1 1504 aa37.85■■■■□ 3.65
LRP5-201ENST00000294304 DCAF8L2P0C7V8 631 aa37.81■■■■□ 3.64
LRP5-201ENST00000294304 SUPT5HO00267 1087 aaKnown RBP35.84■■■■□ 3.33
LRP5-201ENST00000294304 SHROOM4Q9ULL8 1493 aa35.58■■■■□ 3.29
LRP5-201ENST00000294304 EHMT2Q96KQ7 1210 aa34.25■■■■□ 3.07
LRP5-201ENST00000294304 FAM9AQ8IZU1 332 aaPredicted RBP33.67■■■□□ 2.98
LRP5-201ENST00000294304 APLP2Q06481 763 aa33.52■■■□□ 2.96
LRP5-201ENST00000294304 TRIM41Q8WV44 630 aa33.3■■■□□ 2.92
LRP5-201ENST00000294304 TTBK1Q5TCY1 1321 aaPredicted RBP33.01■■■□□ 2.88
LRP5-201ENST00000294304 PCGF6Q9BYE7 350 aa32.93■■■□□ 2.86
LRP5-201ENST00000294304 RANGAP1P46060 587 aaPredicted RBP32.91■■■□□ 2.86
LRP5-201ENST00000294304 UBTFP17480 764 aaKnown RBP32.73■■■□□ 2.83
LRP5-201ENST00000294304 ATP1B4Q9UN42 357 aaPredicted RBP32.54■■■□□ 2.8
LRP5-201ENST00000294304 ABCC9O60706 1549 aa32.45■■■□□ 2.79
LRP5-201ENST00000294304 CCER1Q8TC90 406 aaPredicted RBP32.29■■■□□ 2.76
LRP5-201ENST00000294304 ZEB1P37275 1124 aaPredicted RBP32.24■■■□□ 2.75
LRP5-201ENST00000294304 CHIC1Q5VXU3 224 aa32.19■■■□□ 2.74
LRP5-201ENST00000294304 PELP1Q8IZL8 1130 aaKnown RBP32.12■■■□□ 2.73
LRP5-201ENST00000294304 PABPN1Q86U42 306 aaKnown RBP eCLIP32.04■■■□□ 2.72
LRP5-201ENST00000294304 PPARGC1BQ86YN6 1023 aaKnown RBP32.04■■■□□ 2.72
LRP5-201ENST00000294304 LOC105371045A0A1W2PR82 267 aa31.95■■■□□ 2.7
LRP5-201ENST00000294304 TRIM26Q12899 539 aaPredicted RBP31.82■■■□□ 2.69
LRP5-201ENST00000294304 CENPBP07199 599 aaPredicted RBP31.61■■■□□ 2.65
LRP5-201ENST00000294304 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.54■■■□□ 2.64
LRP5-201ENST00000294304 HNRNPUL2Q1KMD3 747 aaKnown RBP31.54■■■□□ 2.64
LRP5-201ENST00000294304 ITGAEP38570 1179 aa31.48■■■□□ 2.63
LRP5-201ENST00000294304 ZCCHC6Q5VYS8 1495 aaKnown RBP31.38■■■□□ 2.61
LRP5-201ENST00000294304 CCDC180Q9P1Z9 1646 aa31.24■■■□□ 2.59
LRP5-201ENST00000294304 HRCP23327 699 aa31.23■■■□□ 2.59
LRP5-201ENST00000294304 MYT1LQ9UL68 1186 aa31.18■■■□□ 2.58
LRP5-201ENST00000294304 SCRIBQ14160 1630 aa31.15■■■□□ 2.58
LRP5-201ENST00000294304 YTHDC1Q96MU7 727 aaKnown RBP31.13■■■□□ 2.57
LRP5-201ENST00000294304 NEFLP07196 543 aa30.92■■■□□ 2.54
LRP5-201ENST00000294304 FAM50AQ14320 339 aaKnown RBP30.85■■■□□ 2.53
LRP5-201ENST00000294304 CSRNP3Q8WYN3 585 aa30.79■■■□□ 2.52
LRP5-201ENST00000294304 POLR3GLQ9BT43 218 aa30.79■■■□□ 2.52
LRP5-201ENST00000294304 FBLN2P98095 1184 aa30.71■■■□□ 2.51
LRP5-201ENST00000294304 ERICH6Q7L0X2 663 aa30.65■■■□□ 2.5
LRP5-201ENST00000294304 TRIM52Q96A61 297 aa30.55■■■□□ 2.48
LRP5-201ENST00000294304 RB1CC1Q8TDY2 1594 aa30.53■■■□□ 2.48
LRP5-201ENST00000294304 P3H3Q8IVL6 736 aa30.5■■■□□ 2.47
LRP5-201ENST00000294304 CNGB1Q14028 1251 aaPredicted RBP30.45■■■□□ 2.46
LRP5-201ENST00000294304 NEUROD1Q13562 356 aa30.38■■■□□ 2.45
LRP5-201ENST00000294304 DIEXFQ68CQ4 756 aaKnown RBP30.36■■■□□ 2.45
LRP5-201ENST00000294304 NACADO15069 1562 aa30.32■■■□□ 2.44
LRP5-201ENST00000294304 ARID3CA6NKF2 412 aa30.29■■■□□ 2.44
LRP5-201ENST00000294304 RSF1Q96T23 1441 aaPredicted RBP30.22■■■□□ 2.43
LRP5-201ENST00000294304 SLC4A1APQ9BWU0 796 aaKnown RBP30.18■■■□□ 2.42
LRP5-201ENST00000294304 CDK11AQ9UQ88 783 aaPredicted RBP30.09■■■□□ 2.41
LRP5-201ENST00000294304 ZNF326Q5BKZ1 582 aaKnown RBP30.07■■■□□ 2.4
LRP5-201ENST00000294304 ZNF777Q9ULD5 760 aaPredicted RBP30.01■■■□□ 2.39
LRP5-201ENST00000294304 DCAF1Q9Y4B6 1507 aa29.99■■■□□ 2.39
LRP5-201ENST00000294304 ZNF316A6NFI3 1004 aaPredicted RBP29.89■■■□□ 2.38
LRP5-201ENST00000294304 BAZ1BQ9UIG0 1483 aaKnown RBP29.86■■■□□ 2.37
LRP5-201ENST00000294304 ANP32CO43423 234 aa29.83■■■□□ 2.37
LRP5-201ENST00000294304 BAZ1AQ9NRL2 1556 aaPredicted RBP29.74■■■□□ 2.35
LRP5-201ENST00000294304 WRNQ14191 1432 aaPredicted RBP eCLIP29.73■■■□□ 2.35
LRP5-201ENST00000294304 DAXXQ9UER7 740 aaPredicted RBP29.72■■■□□ 2.35
LRP5-201ENST00000294304 EEA1Q15075 1411 aa29.71■■■□□ 2.35
LRP5-201ENST00000294304 CLIP1P30622 1438 aa29.71■■■□□ 2.35
LRP5-201ENST00000294304 CECR2Q9BXF3 1484 aa29.7■■■□□ 2.34
LRP5-201ENST00000294304 CHMP7Q8WUX9 453 aaPredicted RBP29.68■■■□□ 2.34
LRP5-201ENST00000294304 MYO15BQ96JP2 1530 aa29.61■■■□□ 2.33
LRP5-201ENST00000294304 NPM1P06748 294 aaKnown RBP eCLIP29.61■■■□□ 2.33
LRP5-201ENST00000294304 GOLGA3Q08378 1498 aa29.58■■■□□ 2.33
LRP5-201ENST00000294304 MTUS2Q5JR59 1369 aa29.56■■■□□ 2.32
LRP5-201ENST00000294304 CHIC2Q9UKJ5 165 aa29.54■■■□□ 2.32
LRP5-201ENST00000294304 TONSLQ96HA7 1378 aa29.54■■■□□ 2.32
LRP5-201ENST00000294304 CEP162Q5TB80 1403 aa29.49■■■□□ 2.31
LRP5-201ENST00000294304 KIF27Q86VH2 1401 aa29.48■■■□□ 2.31
LRP5-201ENST00000294304 BCANQ96GW7 911 aa29.47■■■□□ 2.31
LRP5-201ENST00000294304 CLSPNQ9HAW4 1339 aa29.42■■■□□ 2.3
LRP5-201ENST00000294304 TSPY4P0CV99 314 aa29.39■■■□□ 2.3
LRP5-201ENST00000294304 TSPY10P0CW01 314 aa29.39■■■□□ 2.3
LRP5-201ENST00000294304 GTF3C3Q9Y5Q9 886 aa29.38■■■□□ 2.29
LRP5-201ENST00000294304 ESF1Q9H501 851 aaKnown RBP29.37■■■□□ 2.29
LRP5-201ENST00000294304 TNIKQ9UKE5 1360 aa29.35■■■□□ 2.29
LRP5-201ENST00000294304 CEP164Q9UPV0 1460 aa29.35■■■□□ 2.29
LRP5-201ENST00000294304 CHGAP10645 457 aaKnown RBP29.33■■■□□ 2.29
LRP5-201ENST00000294304 MROH2BQ7Z745 1585 aa29.32■■■□□ 2.28
LRP5-201ENST00000294304 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.3■■■□□ 2.283e-8■□□□□ 10.3
LRP5-201ENST00000294304 STAG3Q9UJ98 1225 aa29.23■■■□□ 2.27
LRP5-201ENST00000294304 MYT1Q01538 1121 aa29.22■■■□□ 2.27
LRP5-201ENST00000294304 PLEKHD1A6NEE1 506 aa29.2■■■□□ 2.27
LRP5-201ENST00000294304 DDX10Q13206 875 aaKnown RBP29.18■■■□□ 2.26
LRP5-201ENST00000294304 NEFMP07197 916 aa29.17■■■□□ 2.26
LRP5-201ENST00000294304 ERCC6Q03468 1493 aa29.17■■■□□ 2.26
LRP5-201ENST00000294304 RRP7BPQ9NSQ0 103 aa29.16■■■□□ 2.26
LRP5-201ENST00000294304 CCDC88BA6NC98 1476 aa29.16■■■□□ 2.26
LRP5-201ENST00000294304 KCNH8Q96L42 1107 aa29.13■■■□□ 2.25
LRP5-201ENST00000294304 ACIN1Q9UKV3 1341 aaKnown RBP29.12■■■□□ 2.25
LRP5-201ENST00000294304 SOGA1O94964 1423 aa29.09■■■□□ 2.25
LRP5-201ENST00000294304 SMARCA2P51531 1590 aa29.08■■■□□ 2.25
LRP5-201ENST00000294304 CANXP27824 592 aaKnown RBP29.07■■■□□ 2.24
LRP5-201ENST00000294304 CUX2O14529 1486 aa29.05■■■□□ 2.24
LRP5-201ENST00000294304 KDM2AQ9Y2K7 1162 aa29.05■■■□□ 2.24
LRP5-201ENST00000294304 CARMIL1Q5VZK9 1371 aa29.02■■■□□ 2.24
LRP5-201ENST00000294304 PLPPR3Q6T4P5 718 aa29.02■■■□□ 2.24
LRP5-201ENST00000294304 SLC24A1O60721 1099 aa29.01■■■□□ 2.23
LRP5-201ENST00000294304 ZBTB47Q9UFB7 747 aaPredicted RBP28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms