Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CPSF7Q8N684 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CPSF7Q8N684 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CPSF7Q8N684 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CPSF7Q8N684 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CPSF7Q8N684 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CPSF7Q8N684 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.53■■□□□ 1.36
CPSF7Q8N684 HSD17B1P1-201ENST00000590052 955 ntBASIC23.53■■□□□ 1.36
CPSF7Q8N684 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.53■■□□□ 1.36
CPSF7Q8N684 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CPSF7Q8N684 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.52■■□□□ 1.36
CPSF7Q8N684 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CPSF7Q8N684 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.52■■□□□ 1.36
CPSF7Q8N684 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.52■■□□□ 1.36
CPSF7Q8N684 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.52■■□□□ 1.36
CPSF7Q8N684 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CPSF7Q8N684 AL139125.2-201ENST00000623134 1869 ntBASIC23.51■■□□□ 1.35
CPSF7Q8N684 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
CPSF7Q8N684 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CPSF7Q8N684 AC022211.4-201ENST00000625094 2161 ntBASIC23.51■■□□□ 1.35
CPSF7Q8N684 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.51■■□□□ 1.35
CPSF7Q8N684 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CPSF7Q8N684 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.51■■□□□ 1.35
CPSF7Q8N684 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CPSF7Q8N684 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CPSF7Q8N684 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.51■■□□□ 1.35
CPSF7Q8N684 AC138932.3-201ENST00000567634 1902 ntBASIC23.51■■□□□ 1.35
CPSF7Q8N684 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.5■■□□□ 1.35
CPSF7Q8N684 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CPSF7Q8N684 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CPSF7Q8N684 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CPSF7Q8N684 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CPSF7Q8N684 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.5■■□□□ 1.35
CPSF7Q8N684 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.5■■□□□ 1.35
CPSF7Q8N684 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CPSF7Q8N684 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CPSF7Q8N684 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.49■■□□□ 1.35
CPSF7Q8N684 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
CPSF7Q8N684 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CPSF7Q8N684 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
CPSF7Q8N684 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CPSF7Q8N684 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.48■■□□□ 1.35
CPSF7Q8N684 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CPSF7Q8N684 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
CPSF7Q8N684 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CPSF7Q8N684 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CPSF7Q8N684 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.47■■□□□ 1.35
CPSF7Q8N684 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CPSF7Q8N684 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CPSF7Q8N684 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CPSF7Q8N684 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CPSF7Q8N684 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.46■■□□□ 1.35
CPSF7Q8N684 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CPSF7Q8N684 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
CPSF7Q8N684 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CPSF7Q8N684 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.46■■□□□ 1.35
CPSF7Q8N684 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.46■■□□□ 1.35
CPSF7Q8N684 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CPSF7Q8N684 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
CPSF7Q8N684 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.45■■□□□ 1.35
CPSF7Q8N684 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.45■■□□□ 1.34
CPSF7Q8N684 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CPSF7Q8N684 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CPSF7Q8N684 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.45■■□□□ 1.34
CPSF7Q8N684 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.45■■□□□ 1.34
CPSF7Q8N684 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CPSF7Q8N684 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CPSF7Q8N684 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CPSF7Q8N684 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
CPSF7Q8N684 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
CPSF7Q8N684 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
CPSF7Q8N684 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
CPSF7Q8N684 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CPSF7Q8N684 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.44■■□□□ 1.34
CPSF7Q8N684 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CPSF7Q8N684 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.44■■□□□ 1.34
CPSF7Q8N684 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CPSF7Q8N684 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CPSF7Q8N684 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CPSF7Q8N684 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CPSF7Q8N684 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CPSF7Q8N684 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.43■■□□□ 1.34
CPSF7Q8N684 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CPSF7Q8N684 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.43■■□□□ 1.34
CPSF7Q8N684 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CPSF7Q8N684 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.43■■□□□ 1.34
CPSF7Q8N684 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CPSF7Q8N684 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.43■■□□□ 1.34
CPSF7Q8N684 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CPSF7Q8N684 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CPSF7Q8N684 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
CPSF7Q8N684 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
CPSF7Q8N684 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CPSF7Q8N684 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CPSF7Q8N684 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.41■■□□□ 1.34
CPSF7Q8N684 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CPSF7Q8N684 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
CPSF7Q8N684 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
CPSF7Q8N684 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.4■■□□□ 1.34
CPSF7Q8N684 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms