Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC31.09■■■□□ 2.57
CCDC30Q5VVM6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CCDC30Q5VVM6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CCDC30Q5VVM6 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC30Q5VVM6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC31.08■■■□□ 2.57
CCDC30Q5VVM6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC30Q5VVM6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC31.08■■■□□ 2.57
CCDC30Q5VVM6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.08■■■□□ 2.57
CCDC30Q5VVM6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC30Q5VVM6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
CCDC30Q5VVM6 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CCDC30Q5VVM6 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CCDC30Q5VVM6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC31.07■■■□□ 2.56
CCDC30Q5VVM6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
CCDC30Q5VVM6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CCDC30Q5VVM6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
CCDC30Q5VVM6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC30Q5VVM6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31.05■■■□□ 2.56
CCDC30Q5VVM6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC31.05■■■□□ 2.56
CCDC30Q5VVM6 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC30Q5VVM6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CCDC30Q5VVM6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CCDC30Q5VVM6 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
CCDC30Q5VVM6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
CCDC30Q5VVM6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
CCDC30Q5VVM6 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CCDC30Q5VVM6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
CCDC30Q5VVM6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
CCDC30Q5VVM6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC31.03■■■□□ 2.56
CCDC30Q5VVM6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.03■■■□□ 2.56
CCDC30Q5VVM6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
CCDC30Q5VVM6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
CCDC30Q5VVM6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CCDC30Q5VVM6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CCDC30Q5VVM6 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
CCDC30Q5VVM6 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC31.01■■■□□ 2.56
CCDC30Q5VVM6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.01■■■□□ 2.55
CCDC30Q5VVM6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CCDC30Q5VVM6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CCDC30Q5VVM6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
CCDC30Q5VVM6 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CCDC30Q5VVM6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC31■■■□□ 2.55
CCDC30Q5VVM6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC31■■■□□ 2.55
CCDC30Q5VVM6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC31■■■□□ 2.55
CCDC30Q5VVM6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC30.99■■■□□ 2.55
CCDC30Q5VVM6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC30.99■■■□□ 2.55
CCDC30Q5VVM6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CCDC30Q5VVM6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
CCDC30Q5VVM6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CCDC30Q5VVM6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC30.99■■■□□ 2.55
CCDC30Q5VVM6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC30.98■■■□□ 2.55
CCDC30Q5VVM6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CCDC30Q5VVM6 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
CCDC30Q5VVM6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC30.98■■■□□ 2.55
CCDC30Q5VVM6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
CCDC30Q5VVM6 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CCDC30Q5VVM6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CCDC30Q5VVM6 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC30.98■■■□□ 2.55
CCDC30Q5VVM6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC30.98■■■□□ 2.55
CCDC30Q5VVM6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
CCDC30Q5VVM6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC30.98■■■□□ 2.55
CCDC30Q5VVM6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC30.97■■■□□ 2.55
CCDC30Q5VVM6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CCDC30Q5VVM6 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CCDC30Q5VVM6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
CCDC30Q5VVM6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
CCDC30Q5VVM6 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CCDC30Q5VVM6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
CCDC30Q5VVM6 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CCDC30Q5VVM6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC30.94■■■□□ 2.54
CCDC30Q5VVM6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC30.94■■■□□ 2.54
CCDC30Q5VVM6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC30.94■■■□□ 2.54
CCDC30Q5VVM6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC30.94■■■□□ 2.54
CCDC30Q5VVM6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CCDC30Q5VVM6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
CCDC30Q5VVM6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CCDC30Q5VVM6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC30.93■■■□□ 2.54
CCDC30Q5VVM6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC30.93■■■□□ 2.54
CCDC30Q5VVM6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CCDC30Q5VVM6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CCDC30Q5VVM6 HYI-210ENST00000486909 905 ntTSL 5 BASIC30.92■■■□□ 2.54
CCDC30Q5VVM6 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CCDC30Q5VVM6 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CCDC30Q5VVM6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC30.91■■■□□ 2.54
CCDC30Q5VVM6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC30.91■■■□□ 2.54
CCDC30Q5VVM6 BHLHE23-202ENST00000612929 1109 ntBASIC30.91■■■□□ 2.54
CCDC30Q5VVM6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CCDC30Q5VVM6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CCDC30Q5VVM6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
CCDC30Q5VVM6 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
CCDC30Q5VVM6 AC139795.1-202ENST00000500444 432 ntBASIC30.9■■■□□ 2.54
CCDC30Q5VVM6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
CCDC30Q5VVM6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
CCDC30Q5VVM6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CCDC30Q5VVM6 AC074183.2-201ENST00000623112 922 ntBASIC30.89■■■□□ 2.54
CCDC30Q5VVM6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CCDC30Q5VVM6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC30.89■■■□□ 2.54
CCDC30Q5VVM6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CCDC30Q5VVM6 KRT18P10-201ENST00000388836 1287 ntBASIC30.88■■■□□ 2.53
CCDC30Q5VVM6 AC087393.1-201ENST00000582896 145 ntBASIC30.88■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms