Protein–RNA interactions for Protein: P00846

MT-ATP6, ATP synthase subunit a, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ATP6P00846 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MT-ATP6P00846 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MT-ATP6P00846 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MT-ATP6P00846 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MT-ATP6P00846 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.79■■□□□ 1.08
MT-ATP6P00846 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MT-ATP6P00846 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-ATP6P00846 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-ATP6P00846 ECEL1P2-201ENST00000461596 1295 ntBASIC21.78■■□□□ 1.08
MT-ATP6P00846 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MT-ATP6P00846 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.78■■□□□ 1.08
MT-ATP6P00846 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-ATP6P00846 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.78■■□□□ 1.08
MT-ATP6P00846 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
MT-ATP6P00846 SMPD5-203ENST00000639008 1464 ntBASIC21.77■■□□□ 1.08
MT-ATP6P00846 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-ATP6P00846 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
MT-ATP6P00846 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-ATP6P00846 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ATP6P00846 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ATP6P00846 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ATP6P00846 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ATP6P00846 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.76■■□□□ 1.07
MT-ATP6P00846 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
MT-ATP6P00846 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.76■■□□□ 1.07
MT-ATP6P00846 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ATP6P00846 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
MT-ATP6P00846 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.75■■□□□ 1.07
MT-ATP6P00846 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MT-ATP6P00846 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MT-ATP6P00846 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
MT-ATP6P00846 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MT-ATP6P00846 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.74■■□□□ 1.07
MT-ATP6P00846 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MT-ATP6P00846 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MT-ATP6P00846 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MT-ATP6P00846 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.74■■□□□ 1.07
MT-ATP6P00846 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
MT-ATP6P00846 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MT-ATP6P00846 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MT-ATP6P00846 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.74■■□□□ 1.07
MT-ATP6P00846 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MT-ATP6P00846 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.73■■□□□ 1.07
MT-ATP6P00846 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
MT-ATP6P00846 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.73■■□□□ 1.07
MT-ATP6P00846 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
MT-ATP6P00846 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.73■■□□□ 1.07
MT-ATP6P00846 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.73■■□□□ 1.07
MT-ATP6P00846 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MT-ATP6P00846 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.72■■□□□ 1.07
MT-ATP6P00846 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MT-ATP6P00846 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.72■■□□□ 1.07
MT-ATP6P00846 AC096887.2-201ENST00000623443 1957 ntBASIC21.72■■□□□ 1.07
MT-ATP6P00846 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
MT-ATP6P00846 AC020928.2-201ENST00000588717 2197 ntBASIC21.71■■□□□ 1.07
MT-ATP6P00846 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MT-ATP6P00846 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.71■■□□□ 1.07
MT-ATP6P00846 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.71■■□□□ 1.07
MT-ATP6P00846 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
MT-ATP6P00846 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.7■■□□□ 1.06
MT-ATP6P00846 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.7■■□□□ 1.06
MT-ATP6P00846 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MT-ATP6P00846 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MT-ATP6P00846 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.7■■□□□ 1.06
MT-ATP6P00846 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MT-ATP6P00846 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MT-ATP6P00846 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.69■■□□□ 1.06
MT-ATP6P00846 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MT-ATP6P00846 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MT-ATP6P00846 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.69■■□□□ 1.06
MT-ATP6P00846 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MT-ATP6P00846 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
MT-ATP6P00846 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MT-ATP6P00846 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MT-ATP6P00846 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MT-ATP6P00846 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
MT-ATP6P00846 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.68■■□□□ 1.06
MT-ATP6P00846 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.68■■□□□ 1.06
MT-ATP6P00846 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MT-ATP6P00846 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
MT-ATP6P00846 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.68■■□□□ 1.06
MT-ATP6P00846 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
MT-ATP6P00846 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
MT-ATP6P00846 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MT-ATP6P00846 GPX1-201ENST00000419349 1106 ntBASIC21.67■■□□□ 1.06
MT-ATP6P00846 RP9P-202ENST00000450133 1212 ntBASIC21.67■■□□□ 1.06
MT-ATP6P00846 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.67■■□□□ 1.06
MT-ATP6P00846 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
MT-ATP6P00846 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MT-ATP6P00846 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
MT-ATP6P00846 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
MT-ATP6P00846 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MT-ATP6P00846 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MT-ATP6P00846 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
MT-ATP6P00846 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
MT-ATP6P00846 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MT-ATP6P00846 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MT-ATP6P00846 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
MT-ATP6P00846 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.64■■□□□ 1.05
MT-ATP6P00846 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms