Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-4A0A1B0GX49 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
TRBV6-4A0A1B0GX49 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-4A0A1B0GX49 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBV6-4A0A1B0GX49 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.05■□□□□ 0.32
TRBV6-4A0A1B0GX49 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV6-4A0A1B0GX49 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV6-4A0A1B0GX49 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.05■□□□□ 0.32
TRBV6-4A0A1B0GX49 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV6-4A0A1B0GX49 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV6-4A0A1B0GX49 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRBV6-4A0A1B0GX49 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-4A0A1B0GX49 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-4A0A1B0GX49 AL157400.5-201ENST00000507624 621 ntBASIC17.04■□□□□ 0.32
TRBV6-4A0A1B0GX49 MIR3960-201ENST00000583311 91 ntBASIC17.04■□□□□ 0.32
TRBV6-4A0A1B0GX49 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TRBV6-4A0A1B0GX49 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRBV6-4A0A1B0GX49 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-4A0A1B0GX49 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-4A0A1B0GX49 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-4A0A1B0GX49 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-4A0A1B0GX49 AC025884.2-201ENST00000553429 711 ntBASIC17.03■□□□□ 0.32
TRBV6-4A0A1B0GX49 AC020928.2-201ENST00000588717 2197 ntBASIC17.03■□□□□ 0.32
TRBV6-4A0A1B0GX49 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-4A0A1B0GX49 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV6-4A0A1B0GX49 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.02■□□□□ 0.32
TRBV6-4A0A1B0GX49 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.02■□□□□ 0.32
TRBV6-4A0A1B0GX49 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.02■□□□□ 0.32
TRBV6-4A0A1B0GX49 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV6-4A0A1B0GX49 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TRBV6-4A0A1B0GX49 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC17.02■□□□□ 0.32
TRBV6-4A0A1B0GX49 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.02■□□□□ 0.32
TRBV6-4A0A1B0GX49 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.02■□□□□ 0.32
TRBV6-4A0A1B0GX49 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV6-4A0A1B0GX49 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV6-4A0A1B0GX49 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.02■□□□□ 0.31
TRBV6-4A0A1B0GX49 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.02■□□□□ 0.31
TRBV6-4A0A1B0GX49 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.02■□□□□ 0.31
TRBV6-4A0A1B0GX49 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-4A0A1B0GX49 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-4A0A1B0GX49 SMPD5-203ENST00000639008 1464 ntBASIC17.01■□□□□ 0.31
TRBV6-4A0A1B0GX49 AC092296.2-201ENST00000589470 999 ntBASIC17.01■□□□□ 0.31
TRBV6-4A0A1B0GX49 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.01■□□□□ 0.31
TRBV6-4A0A1B0GX49 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-4A0A1B0GX49 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRBV6-4A0A1B0GX49 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-4A0A1B0GX49 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-4A0A1B0GX49 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17■□□□□ 0.31
TRBV6-4A0A1B0GX49 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-4A0A1B0GX49 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TRBV6-4A0A1B0GX49 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-4A0A1B0GX49 ECEL1P2-201ENST00000461596 1295 ntBASIC17■□□□□ 0.31
TRBV6-4A0A1B0GX49 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-4A0A1B0GX49 AC022413.1-201ENST00000624602 984 ntBASIC17■□□□□ 0.31
TRBV6-4A0A1B0GX49 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-4A0A1B0GX49 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-4A0A1B0GX49 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-4A0A1B0GX49 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17■□□□□ 0.31
TRBV6-4A0A1B0GX49 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-4A0A1B0GX49 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-4A0A1B0GX49 AC135731.1-201ENST00000569415 2548 ntBASIC17■□□□□ 0.31
TRBV6-4A0A1B0GX49 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC16.99■□□□□ 0.31
TRBV6-4A0A1B0GX49 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC16.99■□□□□ 0.31
TRBV6-4A0A1B0GX49 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC16.99■□□□□ 0.31
TRBV6-4A0A1B0GX49 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-4A0A1B0GX49 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-4A0A1B0GX49 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRBV6-4A0A1B0GX49 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-4A0A1B0GX49 MIR4449-201ENST00000578365 66 ntBASIC16.99■□□□□ 0.31
TRBV6-4A0A1B0GX49 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-4A0A1B0GX49 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-4A0A1B0GX49 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-4A0A1B0GX49 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
TRBV6-4A0A1B0GX49 AC096887.2-201ENST00000623443 1957 ntBASIC16.98■□□□□ 0.31
TRBV6-4A0A1B0GX49 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV6-4A0A1B0GX49 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV6-4A0A1B0GX49 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV6-4A0A1B0GX49 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV6-4A0A1B0GX49 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC16.98■□□□□ 0.31
TRBV6-4A0A1B0GX49 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV6-4A0A1B0GX49 HES4-202ENST00000428771 1040 ntTSL 2 BASIC16.98■□□□□ 0.31
TRBV6-4A0A1B0GX49 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRBV6-4A0A1B0GX49 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV6-4A0A1B0GX49 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV6-4A0A1B0GX49 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRBV6-4A0A1B0GX49 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-4A0A1B0GX49 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-4A0A1B0GX49 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-4A0A1B0GX49 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
TRBV6-4A0A1B0GX49 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC16.97■□□□□ 0.31
TRBV6-4A0A1B0GX49 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TRBV6-4A0A1B0GX49 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV6-4A0A1B0GX49 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV6-4A0A1B0GX49 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.96■□□□□ 0.31
TRBV6-4A0A1B0GX49 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC16.96■□□□□ 0.31
TRBV6-4A0A1B0GX49 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC16.96■□□□□ 0.31
TRBV6-4A0A1B0GX49 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV6-4A0A1B0GX49 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRBV6-4A0A1B0GX49 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRBV6-4A0A1B0GX49 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms