Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV8-3A0A0A6YYJ7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC16.95■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC16.93■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 AC148477.6-201ENST00000623746 465 ntBASIC16.91■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 AP004609.3-201ENST00000610705 1884 ntBASIC16.9■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAV8-3A0A0A6YYJ7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 MIR4449-201ENST00000578365 66 ntBASIC16.85■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 ERN1-208ENST00000606895 2068 ntBASIC16.85■□□□□ 0.29
TRAV8-3A0A0A6YYJ7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms