Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRGV1A0A0A0MS02 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRGV1A0A0A0MS02 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRGV1A0A0A0MS02 AC022413.1-201ENST00000624602 984 ntBASIC17.45■□□□□ 0.38
TRGV1A0A0A0MS02 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.45■□□□□ 0.38
TRGV1A0A0A0MS02 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRGV1A0A0A0MS02 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRGV1A0A0A0MS02 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRGV1A0A0A0MS02 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRGV1A0A0A0MS02 DUSP8P4-201ENST00000399538 1761 ntBASIC17.44■□□□□ 0.38
TRGV1A0A0A0MS02 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.44■□□□□ 0.38
TRGV1A0A0A0MS02 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRGV1A0A0A0MS02 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRGV1A0A0A0MS02 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.44■□□□□ 0.38
TRGV1A0A0A0MS02 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRGV1A0A0A0MS02 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV1A0A0A0MS02 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
TRGV1A0A0A0MS02 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.43■□□□□ 0.38
TRGV1A0A0A0MS02 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV1A0A0A0MS02 MIR4449-201ENST00000578365 66 ntBASIC17.43■□□□□ 0.38
TRGV1A0A0A0MS02 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV1A0A0A0MS02 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV1A0A0A0MS02 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV1A0A0A0MS02 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
TRGV1A0A0A0MS02 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV1A0A0A0MS02 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TRGV1A0A0A0MS02 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV1A0A0A0MS02 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV1A0A0A0MS02 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV1A0A0A0MS02 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV1A0A0A0MS02 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV1A0A0A0MS02 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.42■□□□□ 0.38
TRGV1A0A0A0MS02 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV1A0A0A0MS02 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV1A0A0A0MS02 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV1A0A0A0MS02 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC17.42■□□□□ 0.38
TRGV1A0A0A0MS02 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.41■□□□□ 0.38
TRGV1A0A0A0MS02 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV1A0A0A0MS02 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV1A0A0A0MS02 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV1A0A0A0MS02 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.41■□□□□ 0.38
TRGV1A0A0A0MS02 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.41■□□□□ 0.38
TRGV1A0A0A0MS02 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV1A0A0A0MS02 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV1A0A0A0MS02 ERN1-208ENST00000606895 2068 ntBASIC17.41■□□□□ 0.38
TRGV1A0A0A0MS02 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC17.41■□□□□ 0.38
TRGV1A0A0A0MS02 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV1A0A0A0MS02 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TRGV1A0A0A0MS02 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV1A0A0A0MS02 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV1A0A0A0MS02 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV1A0A0A0MS02 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV1A0A0A0MS02 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV1A0A0A0MS02 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.4■□□□□ 0.38
TRGV1A0A0A0MS02 AL157400.5-201ENST00000507624 621 ntBASIC17.4■□□□□ 0.38
TRGV1A0A0A0MS02 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC17.4■□□□□ 0.38
TRGV1A0A0A0MS02 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV1A0A0A0MS02 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.4■□□□□ 0.38
TRGV1A0A0A0MS02 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV1A0A0A0MS02 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV1A0A0A0MS02 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.39■□□□□ 0.37
TRGV1A0A0A0MS02 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV1A0A0A0MS02 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV1A0A0A0MS02 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC17.39■□□□□ 0.37
TRGV1A0A0A0MS02 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.39■□□□□ 0.37
TRGV1A0A0A0MS02 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV1A0A0A0MS02 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC17.38■□□□□ 0.37
TRGV1A0A0A0MS02 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV1A0A0A0MS02 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV1A0A0A0MS02 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV1A0A0A0MS02 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV1A0A0A0MS02 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRGV1A0A0A0MS02 AC010501.1-201ENST00000606270 1962 ntBASIC17.38■□□□□ 0.37
TRGV1A0A0A0MS02 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.38■□□□□ 0.37
TRGV1A0A0A0MS02 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.38■□□□□ 0.37
TRGV1A0A0A0MS02 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV1A0A0A0MS02 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV1A0A0A0MS02 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV1A0A0A0MS02 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRGV1A0A0A0MS02 SMPD5-203ENST00000639008 1464 ntBASIC17.37■□□□□ 0.37
TRGV1A0A0A0MS02 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRGV1A0A0A0MS02 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRGV1A0A0A0MS02 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.37■□□□□ 0.37
TRGV1A0A0A0MS02 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.37■□□□□ 0.37
TRGV1A0A0A0MS02 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRGV1A0A0A0MS02 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRGV1A0A0A0MS02 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.37■□□□□ 0.37
TRGV1A0A0A0MS02 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.37■□□□□ 0.37
TRGV1A0A0A0MS02 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRGV1A0A0A0MS02 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TRGV1A0A0A0MS02 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRGV1A0A0A0MS02 AC092296.2-201ENST00000589470 999 ntBASIC17.36■□□□□ 0.37
TRGV1A0A0A0MS02 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.36■□□□□ 0.37
TRGV1A0A0A0MS02 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.36■□□□□ 0.37
TRGV1A0A0A0MS02 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRGV1A0A0A0MS02 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRGV1A0A0A0MS02 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRGV1A0A0A0MS02 GPX1-201ENST00000419349 1106 ntBASIC17.35■□□□□ 0.37
TRGV1A0A0A0MS02 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.35■□□□□ 0.37
TRGV1A0A0A0MS02 MIR3960-201ENST00000583311 91 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms