Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.16■□□□□ 0.821e-7■□□□□ 11.3
MATR3P43243 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.771e-7■□□□□ 11.3
MATR3P43243 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.631e-7■□□□□ 11.3
MATR3P43243 SHOC2-205ENST00000489390 815 ntTSL 515.34■□□□□ 0.051e-7■□□□□ 11.3
MATR3P43243 SHOC2-202ENST00000369452 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.151e-7■□□□□ 11.3
MATR3P43243 NBR2-202ENST00000460115 1344 ntTSL 2 BASIC13.32□□□□□ -0.283e-18■□□□□ 11.3
MATR3P43243 NBR2-203ENST00000467245 1158 ntTSL 2 BASIC10.36□□□□□ -0.753e-18■□□□□ 11.3
MATR3P43243 SPAG16-211ENST00000452556 4751 ntTSL 210.05□□□□□ -0.81e-7■□□□□ 11.3
MATR3P43243 ZC3H14-203ENST00000318308 1384 ntTSL 1 (best) BASIC8.73□□□□□ -1.011e-7■□□□□ 11.3
MATR3P43243 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.99□□□□□ -1.611e-7■□□□□ 11.3
MATR3P43243 ZC3H14-225ENST00000557737 908 ntTSL 54.2□□□□□ -1.741e-7■□□□□ 11.3
MATR3P43243 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.99□□□□□ -1.771e-7■□□□□ 11.3
MATR3P43243 SHOC2-204ENST00000480155 650 ntTSL 23.01□□□□□ -1.931e-7■□□□□ 11.3
MATR3P43243 SPAG16-205ENST00000414961 578 ntTSL 22.92□□□□□ -1.941e-7■□□□□ 11.3
MATR3P43243 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.78■■□□□ 1.082e-6■□□□□ 11.3
MATR3P43243 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.09□□□□□ -1.432e-6■□□□□ 11.3
MATR3P43243 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.532e-6■□□□□ 11.3
MATR3P43243 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.3□□□□□ -1.882e-6■□□□□ 11.3
MATR3P43243 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.39■■□□□ 1.667e-7■□□□□ 11.2
MATR3P43243 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.457e-7■□□□□ 11.2
MATR3P43243 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.89■□□□□ 0.297e-7■□□□□ 11.2
MATR3P43243 CNN3-203ENST00000415017 792 ntTSL 214.42□□□□□ -0.17e-7■□□□□ 11.2
MATR3P43243 CNN3-205ENST00000474409 544 ntTSL 39.16□□□□□ -0.947e-7■□□□□ 11.2
MATR3P43243 HLF-205ENST00000572234 298 ntTSL 53.39□□□□□ -1.872e-8■□□□□ 11.2
MATR3P43243 HIST1H2AC-201ENST00000314088 1668 ntTSL 1 (best)18.79■□□□□ 0.62e-6■□□□□ 11.2
MATR3P43243 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.472e-6■□□□□ 11.2
MATR3P43243 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.322e-6■□□□□ 11.2
MATR3P43243 CAPRIN1-205ENST00000528856 595 ntTSL 525.7■■□□□ 1.73e-12■□□□□ 11.2
MATR3P43243 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.463e-12■□□□□ 11.2
MATR3P43243 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.073e-12■□□□□ 11.2
MATR3P43243 CAPRIN1-202ENST00000389645 3498 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.253e-12■□□□□ 11.2
MATR3P43243 CAPRIN1-201ENST00000341394 4108 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.483e-12■□□□□ 11.2
MATR3P43243 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.793e-12■□□□□ 11.2
MATR3P43243 C9orf3-207ENST00000445181 873 ntTSL 326.25■■□□□ 1.793e-6■□□□□ 11.2
MATR3P43243 C9orf3-215ENST00000478473 895 ntTSL 325.51■■□□□ 1.673e-6■□□□□ 11.2
MATR3P43243 C9orf3-216ENST00000478603 802 ntTSL 224.94■■□□□ 1.583e-6■□□□□ 11.2
MATR3P43243 C9orf3-213ENST00000471978 478 ntTSL 224.63■■□□□ 1.533e-6■□□□□ 11.2
MATR3P43243 C9orf3-209ENST00000460573 443 ntTSL 524.55■■□□□ 1.523e-6■□□□□ 11.2
MATR3P43243 C9orf3-217ENST00000479161 942 ntTSL 516.85■□□□□ 0.293e-6■□□□□ 11.2
MATR3P43243 C9orf3-210ENST00000462125 961 ntTSL 314.4□□□□□ -0.13e-6■□□□□ 11.2
MATR3P43243 C9orf3-211ENST00000463372 919 ntTSL 314.26□□□□□ -0.133e-6■□□□□ 11.2
MATR3P43243 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.571e-8■□□□□ 11.2
MATR3P43243 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.211e-8■□□□□ 11.2
MATR3P43243 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.59■□□□□ 0.091e-8■□□□□ 11.2
MATR3P43243 MAPK14-206ENST00000474429 823 ntTSL 512.44□□□□□ -0.421e-8■□□□□ 11.2
MATR3P43243 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.71□□□□□ -1.181e-8■□□□□ 11.2
MATR3P43243 MAPK14-208ENST00000491957 2777 ntTSL 1 (best)7.65□□□□□ -1.181e-8■□□□□ 11.2
MATR3P43243 MAPK14-209ENST00000496250 2750 ntTSL 1 (best)7.23□□□□□ -1.251e-8■□□□□ 11.2
MATR3P43243 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC14□□□□□ -0.179e-11■□□□□ 11.2
MATR3P43243 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.399e-10■□□□□ 11.2
MATR3P43243 SSUH2-205ENST00000420394 1634 ntTSL 1 (best)21.95■■□□□ 1.19e-10■□□□□ 11.2
MATR3P43243 SSUH2-204ENST00000415132 1645 ntTSL 521.31■■□□□ 19e-10■□□□□ 11.2
MATR3P43243 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.769e-10■□□□□ 11.2
MATR3P43243 SSUH2-203ENST00000413305 1874 ntTSL 1 (best)14.81□□□□□ -0.049e-10■□□□□ 11.2
MATR3P43243 SSUH2-207ENST00000435138 2632 ntTSL 214.16□□□□□ -0.149e-10■□□□□ 11.2
MATR3P43243 SSUH2-201ENST00000317371 2561 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.289e-10■□□□□ 11.2
MATR3P43243 SSUH2-208ENST00000455157 3219 ntTSL 212.75□□□□□ -0.379e-10■□□□□ 11.2
MATR3P43243 JADE3-202ENST00000455411 492 ntTSL 420.98■□□□□ 0.958e-10■□□□□ 11.2
MATR3P43243 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.678e-10■□□□□ 11.2
MATR3P43243 LMBR1-206ENST00000430825 1208 ntTSL 518.21■□□□□ 0.518e-10■□□□□ 11.2
MATR3P43243 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.98e-10■□□□□ 11.2
MATR3P43243 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.148e-10■□□□□ 11.2
MATR3P43243 JADE3-201ENST00000424392 636 ntTSL 36.49□□□□□ -1.378e-10■□□□□ 11.2
MATR3P43243 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.08□□□□□ -1.768e-10■□□□□ 11.2
MATR3P43243 SDC2-205ENST00000520233 563 ntTSL 419.45■□□□□ 0.72e-7■□□□□ 11.2
MATR3P43243 SDC2-203ENST00000519587 557 ntTSL 415.48■□□□□ 0.072e-7■□□□□ 11.2
MATR3P43243 CRYBB2P1-206ENST00000609513 2819 nt9.04□□□□□ -0.962e-10■□□□□ 11.1
MATR3P43243 SPTLC3-205ENST00000476791 2480 ntTSL 1 (best)6.88□□□□□ -1.312e-10■□□□□ 11.1
MATR3P43243 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC14.82□□□□□ -0.042e-8■□□□□ 11.1
MATR3P43243 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC26.48■■□□□ 1.838e-7■□□□□ 11.1
MATR3P43243 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.098e-7■□□□□ 11.1
MATR3P43243 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC14.32□□□□□ -0.128e-7■□□□□ 11.1
MATR3P43243 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.198e-7■□□□□ 11.1
MATR3P43243 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC14.46□□□□□ -0.18e-7■□□□□ 11.1
MATR3P43243 SPRED2-205ENST00000440972 555 ntTSL 314.22□□□□□ -0.138e-7■□□□□ 11.1
MATR3P43243 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.795e-24■□□□□ 11.1
MATR3P43243 MARF1-205ENST00000548025 5891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.362e-10■□□□□ 11.1
MATR3P43243 MARF1-214ENST00000552553 5053 ntTSL 511.45□□□□□ -0.582e-10■□□□□ 11.1
MATR3P43243 MARF1-202ENST00000540441 7105 ntTSL 5 BASIC10.98□□□□□ -0.652e-10■□□□□ 11.1
MATR3P43243 MARF1-211ENST00000551742 5900 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.682e-10■□□□□ 11.1
MATR3P43243 MARF1-204ENST00000547936 574 ntTSL 410.32□□□□□ -0.762e-10■□□□□ 11.1
MATR3P43243 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.952e-10■□□□□ 11.1
MATR3P43243 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.046e-7■□□□□ 11
MATR3P43243 GPR75-ASB3-203ENST00000498475 736 ntTSL 526.12■■□□□ 1.776e-7■□□□□ 11
MATR3P43243 BTK-202ENST00000372880 2248 ntTSL 2 BASIC9.9□□□□□ -0.823e-7■□□□□ 11
MATR3P43243 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC8.97□□□□□ -0.973e-7■□□□□ 11
MATR3P43243 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.043e-7■□□□□ 11
MATR3P43243 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.12□□□□□ -1.273e-7■□□□□ 11
MATR3P43243 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC14.63□□□□□ -0.071e-7■□□□□ 11
MATR3P43243 THOC2-209ENST00000448128 1365 ntTSL 56.84□□□□□ -1.317e-11■□□□□ 11
MATR3P43243 THOC2-219ENST00000497887 768 ntTSL 35.7□□□□□ -1.57e-11■□□□□ 11
MATR3P43243 THOC2-217ENST00000492203 641 ntTSL 35.09□□□□□ -1.597e-11■□□□□ 11
MATR3P43243 THOC2-208ENST00000441692 4364 ntTSL 54.3□□□□□ -1.727e-11■□□□□ 11
MATR3P43243 ST3GAL3-223ENST00000479383 873 ntTSL 318.14■□□□□ 0.496e-8■□□□□ 11
MATR3P43243 ST3GAL3-220ENST00000461066 692 ntTSL 511.47□□□□□ -0.576e-8■□□□□ 11
MATR3P43243 ST3GAL3-235ENST00000532911 700 ntTSL 58.12□□□□□ -1.116e-8■□□□□ 11
MATR3P43243 FAM171A1-202ENST00000455654 605 ntTSL 318.29■□□□□ 0.521e-6■□□□□ 11
MATR3P43243 FAM171A1-201ENST00000378116 3952 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.671e-6■□□□□ 11
MATR3P43243 TSPAN9-208ENST00000640568 1465 ntTSL 523.66■■□□□ 1.383e-6■□□□□ 11
MATR3P43243 TSPAN9-203ENST00000431374 558 ntTSL 416.71■□□□□ 0.273e-6■□□□□ 11
Retrieved 100 of 16,209 protein–RNA pairs in 273.2 ms