RNA–Protein interactions for RNA: ENST00000397412.7

CRAMP1-202, Transcript of cramped chromatin regulator homolog 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CRAMP1, Length 7,772 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-202ENST00000397412 DCAF8L2P0C7V8 631 aa28.44■■■□□ 2.14
CRAMP1-202ENST00000397412 EHMT2Q96KQ7 1210 aa26.65■■□□□ 1.86
CRAMP1-202ENST00000397412 PELP1Q8IZL8 1130 aaKnown RBP26.42■■□□□ 1.82
CRAMP1-202ENST00000397412 SUPT5HO00267 1087 aaKnown RBP26.16■■□□□ 1.78
CRAMP1-202ENST00000397412 FAM9AQ8IZU1 332 aaPredicted RBP25.84■■□□□ 1.73
CRAMP1-202ENST00000397412 APLP2Q06481 763 aa25.81■■□□□ 1.72
CRAMP1-202ENST00000397412 ERICH6Q7L0X2 663 aa25.8■■□□□ 1.72
CRAMP1-202ENST00000397412 TTBK1Q5TCY1 1321 aaPredicted RBP25.67■■□□□ 1.7
CRAMP1-202ENST00000397412 SHROOM4Q9ULL8 1493 aa25.47■■□□□ 1.67
CRAMP1-202ENST00000397412 ATP1B4Q9UN42 357 aaPredicted RBP25.4■■□□□ 1.66
CRAMP1-202ENST00000397412 RANGAP1P46060 587 aaPredicted RBP25.39■■□□□ 1.66
CRAMP1-202ENST00000397412 CCER1Q8TC90 406 aaPredicted RBP25.32■■□□□ 1.64
CRAMP1-202ENST00000397412 MYT1Q01538 1121 aa25.09■■□□□ 1.61
CRAMP1-202ENST00000397412 PCGF6Q9BYE7 350 aa24.93■■□□□ 1.58
CRAMP1-202ENST00000397412 MYT1LQ9UL68 1186 aa24.88■■□□□ 1.57
CRAMP1-202ENST00000397412 CHIC1Q5VXU3 224 aa24.79■■□□□ 1.56
CRAMP1-202ENST00000397412 NEFLP07196 543 aa24.7■■□□□ 1.54
CRAMP1-202ENST00000397412 DAXXQ9UER7 740 aaPredicted RBP24.64■■□□□ 1.53
CRAMP1-202ENST00000397412 CENPBP07199 599 aaPredicted RBP24.62■■□□□ 1.53
CRAMP1-202ENST00000397412 YTHDC1Q96MU7 727 aaKnown RBP24.57■■□□□ 1.52
CRAMP1-202ENST00000397412 POLR3GLQ9BT43 218 aa24.56■■□□□ 1.52
CRAMP1-202ENST00000397412 SLC4A1APQ9BWU0 796 aaKnown RBP24.49■■□□□ 1.51
CRAMP1-202ENST00000397412 CNGB1Q14028 1251 aaPredicted RBP24.44■■□□□ 1.5
CRAMP1-202ENST00000397412 UBTFP17480 764 aaKnown RBP24.29■■□□□ 1.48
CRAMP1-202ENST00000397412 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.27■■□□□ 1.48
CRAMP1-202ENST00000397412 HNRNPUL2Q1KMD3 747 aaKnown RBP24.27■■□□□ 1.48
CRAMP1-202ENST00000397412 ITGAEP38570 1179 aa24■■□□□ 1.43
CRAMP1-202ENST00000397412 PPARGC1BQ86YN6 1023 aaKnown RBP24■■□□□ 1.43
CRAMP1-202ENST00000397412 CLSPNQ9HAW4 1339 aa24■■□□□ 1.43
CRAMP1-202ENST00000397412 TRIM41Q8WV44 630 aa23.97■■□□□ 1.43
CRAMP1-202ENST00000397412 SLC24A1O60721 1099 aa23.96■■□□□ 1.43
CRAMP1-202ENST00000397412 ZNF316A6NFI3 1004 aaPredicted RBP23.95■■□□□ 1.42
CRAMP1-202ENST00000397412 ZEB1P37275 1124 aaPredicted RBP23.88■■□□□ 1.41
CRAMP1-202ENST00000397412 BCL11AQ9H165 835 aa23.87■■□□□ 1.41
CRAMP1-202ENST00000397412 ZBTB47Q9UFB7 747 aaPredicted RBP23.57■■□□□ 1.36
CRAMP1-202ENST00000397412 RTL5Q5HYW3 569 aaPredicted RBP23.56■■□□□ 1.36
CRAMP1-202ENST00000397412 BCANQ96GW7 911 aa23.54■■□□□ 1.36
CRAMP1-202ENST00000397412 NISCHQ9Y2I1 1504 aa23.51■■□□□ 1.35
CRAMP1-202ENST00000397412 PLPPR3Q6T4P5 718 aa23.29■■□□□ 1.32
CRAMP1-202ENST00000397412 CANXP27824 592 aaKnown RBP23.18■■□□□ 1.3
CRAMP1-202ENST00000397412 TRIM52Q96A61 297 aa23.15■■□□□ 1.3
CRAMP1-202ENST00000397412 ZNF326Q5BKZ1 582 aaKnown RBP23.13■■□□□ 1.29
CRAMP1-202ENST00000397412 FAM50AQ14320 339 aaKnown RBP23.09■■□□□ 1.29
CRAMP1-202ENST00000397412 NEFMP07197 916 aa23.06■■□□□ 1.28
CRAMP1-202ENST00000397412 NEUROD1Q13562 356 aa22.98■■□□□ 1.27
CRAMP1-202ENST00000397412 A0A0G2JS52 829 aa22.96■■□□□ 1.27
CRAMP1-202ENST00000397412 FBLN2P98095 1184 aa22.95■■□□□ 1.26
CRAMP1-202ENST00000397412 SCAF1Q9H7N4 1312 aaKnown RBP22.87■■□□□ 1.25
CRAMP1-202ENST00000397412 TRIM26Q12899 539 aaPredicted RBP22.83■■□□□ 1.24
CRAMP1-202ENST00000397412 ESF1Q9H501 851 aaKnown RBP22.81■■□□□ 1.24
CRAMP1-202ENST00000397412 CDK11BP21127 795 aaKnown RBP22.75■■□□□ 1.23
CRAMP1-202ENST00000397412 CDK11AQ9UQ88 783 aaPredicted RBP22.75■■□□□ 1.23
CRAMP1-202ENST00000397412 HSP90AA1P07900 732 aaKnown RBP22.74■■□□□ 1.23
CRAMP1-202ENST00000397412 HRCP23327 699 aa22.72■■□□□ 1.23
CRAMP1-202ENST00000397412 TULP1O00294 542 aaPredicted RBP22.71■■□□□ 1.23
CRAMP1-202ENST00000397412 STAG3Q9UJ98 1225 aa22.69■■□□□ 1.22
CRAMP1-202ENST00000397412 ANP32BQ92688 251 aaKnown RBP22.69■■□□□ 1.22
CRAMP1-202ENST00000397412 NPM2Q86SE8 214 aaKnown RBP22.68■■□□□ 1.22
CRAMP1-202ENST00000397412 PLEKHG5O94827 1062 aa22.68■■□□□ 1.22
CRAMP1-202ENST00000397412 ARID3CA6NKF2 412 aa22.61■■□□□ 1.21
CRAMP1-202ENST00000397412 ANP32CO43423 234 aa22.59■■□□□ 1.21
CRAMP1-202ENST00000397412 EIF5BO60841 1220 aaKnown RBP22.59■■□□□ 1.21
CRAMP1-202ENST00000397412 CHGAP10645 457 aaKnown RBP22.57■■□□□ 1.2
CRAMP1-202ENST00000397412 DIEXFQ68CQ4 756 aaKnown RBP22.56■■□□□ 1.2
CRAMP1-202ENST00000397412 NCBP3Q53F19 620 aaKnown RBP22.52■■□□□ 1.2
CRAMP1-202ENST00000397412 LOC105371045A0A1W2PR82 267 aa22.51■■□□□ 1.19
CRAMP1-202ENST00000397412 ZBTB7CA1YPR0 619 aa22.49■■□□□ 1.19
CRAMP1-202ENST00000397412 ARXQ96QS3 562 aa22.48■■□□□ 1.19
CRAMP1-202ENST00000397412 ANP32AP39687 249 aaKnown RBP22.44■■□□□ 1.18
CRAMP1-202ENST00000397412 ZNF777Q9ULD5 760 aaPredicted RBP22.42■■□□□ 1.18
CRAMP1-202ENST00000397412 SENP3Q9H4L4 574 aaPredicted RBP22.36■■□□□ 1.17
CRAMP1-202ENST00000397412 UPF2Q9HAU5 1272 aaKnown RBP22.31■■□□□ 1.16
CRAMP1-202ENST00000397412 SALL2Q9Y467 1007 aaPredicted RBP22.3■■□□□ 1.16
CRAMP1-202ENST00000397412 C14orf37Q86TY3 774 aa22.29■■□□□ 1.16
CRAMP1-202ENST00000397412 P3H3Q8IVL6 736 aa22.23■■□□□ 1.15
CRAMP1-202ENST00000397412 HAP1P54257 671 aaPredicted RBP22.2■■□□□ 1.14
CRAMP1-202ENST00000397412 TAOK2Q9UL54 1235 aa22.16■■□□□ 1.14
CRAMP1-202ENST00000397412 NPHP1O15259 732 aa22.15■■□□□ 1.14
CRAMP1-202ENST00000397412 TPRNQ4KMQ1 711 aa22.13■■□□□ 1.13
CRAMP1-202ENST00000397412 PABPN1Q86U42 306 aaKnown RBP eCLIP22.13■■□□□ 1.13
CRAMP1-202ENST00000397412 GTF3C3Q9Y5Q9 886 aa22.11■■□□□ 1.13
CRAMP1-202ENST00000397412 NPM1P06748 294 aaKnown RBP eCLIP22.1■■□□□ 1.13
CRAMP1-202ENST00000397412 GLIPR1L2Q4G1C9 344 aa22.06■■□□□ 1.12
CRAMP1-202ENST00000397412 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.05■■□□□ 1.123e-6■■□□□ 12
CRAMP1-202ENST00000397412 NBR1Q14596 966 aa22.02■■□□□ 1.11
CRAMP1-202ENST00000397412 CLSTN1O94985 981 aa22■■□□□ 1.11
CRAMP1-202ENST00000397412 MYH16Q9H6N6 1097 aa21.99■■□□□ 1.11
CRAMP1-202ENST00000397412 FAM9BQ8IZU0 186 aa21.94■■□□□ 1.1
CRAMP1-202ENST00000397412 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.91■■□□□ 1.1
CRAMP1-202ENST00000397412 ZRSR1Q15695 479 aaKnown RBP21.91■■□□□ 1.1
CRAMP1-202ENST00000397412 WDR43Q15061 677 aaKnown RBP eCLIP21.88■■□□□ 1.09
CRAMP1-202ENST00000397412 NCLP19338 710 aaKnown RBP21.86■■□□□ 1.09
CRAMP1-202ENST00000397412 PRM3Q9NNZ6 103 aa21.84■■□□□ 1.09
CRAMP1-202ENST00000397412 KDM2AQ9Y2K7 1162 aa21.8■■□□□ 1.08
CRAMP1-202ENST00000397412 FKBP8Q14318 412 aa21.8■■□□□ 1.08
CRAMP1-202ENST00000397412 ARID4BQ4LE39 1312 aaPredicted RBP21.8■■□□□ 1.08
CRAMP1-202ENST00000397412 PPP1R15AO75807 674 aaPredicted RBP21.79■■□□□ 1.08
CRAMP1-202ENST00000397412 LMOD2Q6P5Q4 547 aa21.79■■□□□ 1.08
CRAMP1-202ENST00000397412 TMC1Q8TDI8 760 aa21.77■■□□□ 1.08
CRAMP1-202ENST00000397412 HNRNPUQ00839 825 aaKnown RBP eCLIP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms