RNA–Protein interactions for RNA: ENST00000458550.5

PRRC2B-207, Transcript of proline rich coiled-coil 2B, humanhuman

TSL 1 (best) BASIC

Gene PRRC2B, Length 899 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC2B-207ENST00000458550 NISCHQ9Y2I1 1504 aa33.63■■■□□ 2.97
PRRC2B-207ENST00000458550 CCDC180Q9P1Z9 1646 aa30.15■■■□□ 2.42
PRRC2B-207ENST00000458550 ABCC9O60706 1549 aa30.15■■■□□ 2.42
PRRC2B-207ENST00000458550 RB1CC1Q8TDY2 1594 aa28.72■■■□□ 2.19
PRRC2B-207ENST00000458550 DCAF8L2P0C7V8 631 aa28.55■■■□□ 2.16
PRRC2B-207ENST00000458550 NACADO15069 1562 aa28.52■■■□□ 2.16
PRRC2B-207ENST00000458550 DNAJC5BQ9UF47 199 aa28.22■■■□□ 2.11
PRRC2B-207ENST00000458550 PABPN1Q86U42 306 aaKnown RBP eCLIP28.12■■■□□ 2.09
PRRC2B-207ENST00000458550 MYO15BQ96JP2 1530 aa28.09■■■□□ 2.09
PRRC2B-207ENST00000458550 UNC13AQ9UPW8 1703 aa28.07■■■□□ 2.08
PRRC2B-207ENST00000458550 ZCCHC6Q5VYS8 1495 aaKnown RBP27.83■■■□□ 2.05
PRRC2B-207ENST00000458550 BICRAQ9NZM4 1560 aa27.81■■■□□ 2.04
PRRC2B-207ENST00000458550 DCAF1Q9Y4B6 1507 aa27.75■■■□□ 2.03
PRRC2B-207ENST00000458550 SCRIBQ14160 1630 aa27.5■■□□□ 1.99
PRRC2B-207ENST00000458550 SHROOM4Q9ULL8 1493 aa27.45■■□□□ 1.99
PRRC2B-207ENST00000458550 CC2D2AQ9P2K1 1620 aa27.23■■□□□ 1.95
PRRC2B-207ENST00000458550 CECR2Q9BXF3 1484 aa27.16■■□□□ 1.94
PRRC2B-207ENST00000458550 EIF4G1Q04637 1599 aaKnown RBP27.16■■□□□ 1.94
PRRC2B-207ENST00000458550 NCAPD3P42695 1498 aa26.3■■□□□ 1.8
PRRC2B-207ENST00000458550 ATAD2BQ9ULI0 1458 aa26.23■■□□□ 1.79
PRRC2B-207ENST00000458550 SMARCA4P51532 1647 aa26.22■■□□□ 1.79
PRRC2B-207ENST00000458550 SMARCA2P51531 1590 aa26.19■■□□□ 1.78
PRRC2B-207ENST00000458550 BAZ1AQ9NRL2 1556 aaPredicted RBP26.12■■□□□ 1.77
PRRC2B-207ENST00000458550 HMGXB3Q12766 1538 aa26.1■■□□□ 1.77
PRRC2B-207ENST00000458550 ERCC6Q03468 1493 aa26.07■■□□□ 1.76
PRRC2B-207ENST00000458550 BAZ1BQ9UIG0 1483 aaKnown RBP26.02■■□□□ 1.76
PRRC2B-207ENST00000458550 CUX2O14529 1486 aa25.95■■□□□ 1.74
PRRC2B-207ENST00000458550 DNAJC5Q9H3Z4 198 aa25.93■■□□□ 1.74
PRRC2B-207ENST00000458550 PEG3Q9GZU2 1588 aa25.93■■□□□ 1.74
PRRC2B-207ENST00000458550 MROH2BQ7Z745 1585 aa25.9■■□□□ 1.74
PRRC2B-207ENST00000458550 NESP48681 1621 aa25.88■■□□□ 1.73
PRRC2B-207ENST00000458550 LAMC3Q9Y6N6 1575 aa25.73■■□□□ 1.71
PRRC2B-207ENST00000458550 WIZO95785 1651 aa25.62■■□□□ 1.69
PRRC2B-207ENST00000458550 PDS5BQ9NTI5 1447 aa25.62■■□□□ 1.69
PRRC2B-207ENST00000458550 THOC2Q8NI27 1593 aaKnown RBP25.58■■□□□ 1.69
PRRC2B-207ENST00000458550 KIF21AQ7Z4S6 1674 aa25.58■■□□□ 1.68
PRRC2B-207ENST00000458550 CADPSQ9ULU8 1353 aa25.55■■□□□ 1.68
PRRC2B-207ENST00000458550 RSF1Q96T23 1441 aaPredicted RBP25.38■■□□□ 1.65
PRRC2B-207ENST00000458550 MRC2Q9UBG0 1479 aa25.35■■□□□ 1.65
PRRC2B-207ENST00000458550 TOP2AP11388 1531 aaKnown RBP25.28■■□□□ 1.64
PRRC2B-207ENST00000458550 CEP164Q9UPV0 1460 aa25.28■■□□□ 1.64
PRRC2B-207ENST00000458550 WDR62O43379 1518 aa25.26■■□□□ 1.63
PRRC2B-207ENST00000458550 FANCD2Q9BXW9 1451 aa25.25■■□□□ 1.63
PRRC2B-207ENST00000458550 CFTRP13569 1480 aa25.22■■□□□ 1.63
PRRC2B-207ENST00000458550 PRDM2Q13029 1718 aa25.03■■□□□ 1.6
PRRC2B-207ENST00000458550 CCDC88BA6NC98 1476 aa25.02■■□□□ 1.6
PRRC2B-207ENST00000458550 URB2Q14146 1524 aaKnown RBP25.01■■□□□ 1.59
PRRC2B-207ENST00000458550 TRIM41Q8WV44 630 aa24.88■■□□□ 1.57
PRRC2B-207ENST00000458550 OSCARQ8IYS5 282 aa24.86■■□□□ 1.57
PRRC2B-207ENST00000458550 IFT140Q96RY7 1462 aa24.77■■□□□ 1.56
PRRC2B-207ENST00000458550 TOPBP1Q92547 1522 aa24.76■■□□□ 1.55
PRRC2B-207ENST00000458550 ABCC8Q09428 1581 aa24.76■■□□□ 1.55
PRRC2B-207ENST00000458550 ZNF608Q9ULD9 1512 aaPredicted RBP24.69■■□□□ 1.54
PRRC2B-207ENST00000458550 DNMBPQ6XZF7 1577 aa24.67■■□□□ 1.54
PRRC2B-207ENST00000458550 EIF4G3O43432 1585 aaKnown RBP24.56■■□□□ 1.52
PRRC2B-207ENST00000458550 TARBP1Q13395 1621 aaKnown RBP24.52■■□□□ 1.52
PRRC2B-207ENST00000458550 AQRO60306 1485 aaKnown RBP eCLIP24.51■■□□□ 1.513e-7■■■■□ 25.6
PRRC2B-207ENST00000458550 POLA1P09884 1462 aaPredicted RBP24.5■■□□□ 1.51
PRRC2B-207ENST00000458550 FBLN2P98095 1184 aa24.46■■□□□ 1.51
PRRC2B-207ENST00000458550 RIMBP3CA6NJZ7 1639 aa24.46■■□□□ 1.51
PRRC2B-207ENST00000458550 RIMBP3BA6NNM3 1639 aa24.46■■□□□ 1.51
PRRC2B-207ENST00000458550 RIMBP3Q9UFD9 1639 aa24.46■■□□□ 1.51
PRRC2B-207ENST00000458550 SOGA1O94964 1423 aa24.45■■□□□ 1.51
PRRC2B-207ENST00000458550 SUPT5HO00267 1087 aaKnown RBP24.44■■□□□ 1.5
PRRC2B-207ENST00000458550 RAD54L2Q9Y4B4 1467 aa24.44■■□□□ 1.5
PRRC2B-207ENST00000458550 CHD1O14646 1710 aa24.42■■□□□ 1.5
PRRC2B-207ENST00000458550 TDRD9Q8NDG6 1382 aaKnown RBP24.39■■□□□ 1.49
PRRC2B-207ENST00000458550 ARHGEF11O15085 1522 aa24.37■■□□□ 1.49
PRRC2B-207ENST00000458550 FGD5Q6ZNL6 1462 aa24.37■■□□□ 1.49
PRRC2B-207ENST00000458550 CUX1P39880 1505 aa24.33■■□□□ 1.49
PRRC2B-207ENST00000458550 WDR97A6NE52 1622 aa24.29■■□□□ 1.48
PRRC2B-207ENST00000458550 CYB5RLQ6IPT4 315 aa24.29■■□□□ 1.48
PRRC2B-207ENST00000458550 CHMP7Q8WUX9 453 aaPredicted RBP24.26■■□□□ 1.47
PRRC2B-207ENST00000458550 SNAPC4Q5SXM2 1469 aa24.25■■□□□ 1.47
PRRC2B-207ENST00000458550 GRIN2BQ13224 1484 aa24.2■■□□□ 1.47
PRRC2B-207ENST00000458550 MAGI1Q96QZ7 1491 aaPredicted RBP24.19■■□□□ 1.46
PRRC2B-207ENST00000458550 GAPVD1Q14C86 1478 aa24.13■■□□□ 1.45
PRRC2B-207ENST00000458550 SYNJ1O43426 1573 aa24.13■■□□□ 1.45
PRRC2B-207ENST00000458550 PBRM1Q86U86 1689 aa24.12■■□□□ 1.45
PRRC2B-207ENST00000458550 SYNJ2O15056 1496 aa24.11■■□□□ 1.45
PRRC2B-207ENST00000458550 ARAP1Q96P48 1450 aa24.11■■□□□ 1.45
PRRC2B-207ENST00000458550 ABCA10Q8WWZ4 1543 aa24.09■■□□□ 1.45
PRRC2B-207ENST00000458550 CLASP1Q7Z460 1538 aa24.07■■□□□ 1.44
PRRC2B-207ENST00000458550 TRHP20396 242 aaPredicted RBP24.05■■□□□ 1.44
PRRC2B-207ENST00000458550 WRNQ14191 1432 aaPredicted RBP eCLIP24.04■■□□□ 1.447e-7■■■■■ 52.5
PRRC2B-207ENST00000458550 ABCA5Q8WWZ7 1642 aa24.02■■□□□ 1.44
PRRC2B-207ENST00000458550 TOP2BQ02880 1626 aa23.97■■□□□ 1.43
PRRC2B-207ENST00000458550 BIVM-ERCC5R4GMW8 1640 aa23.96■■□□□ 1.43
PRRC2B-207ENST00000458550 GRIN2AQ12879 1464 aa23.87■■□□□ 1.41
PRRC2B-207ENST00000458550 ADAMTS12P58397 1594 aa23.85■■□□□ 1.41
PRRC2B-207ENST00000458550 FHAD1B1AJZ9 1412 aa23.83■■□□□ 1.4
PRRC2B-207ENST00000458550 ERICH3Q5RHP9 1530 aa23.79■■□□□ 1.4
PRRC2B-207ENST00000458550 CEP170Q5SW79 1584 aa23.77■■□□□ 1.4
PRRC2B-207ENST00000458550 NUP160Q12769 1436 aa23.76■■□□□ 1.39
PRRC2B-207ENST00000458550 ERCC6L2Q5T890 1561 aa23.7■■□□□ 1.38
PRRC2B-207ENST00000458550 SHROOM2Q13796 1616 aa23.66■■□□□ 1.38
PRRC2B-207ENST00000458550 JPH4Q96JJ6 628 aa23.63■■□□□ 1.37
PRRC2B-207ENST00000458550 PRG4Q92954 1404 aaPredicted RBP23.6■■□□□ 1.37
PRRC2B-207ENST00000458550 KIF27Q86VH2 1401 aa23.56■■□□□ 1.36
PRRC2B-207ENST00000458550 IGF1RP08069 1367 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms