RNA–Protein interactions for RNA: ENST00000489390.1

SHOC2-205, Transcript of SHOC2, leucine rich repeat scaffold protein, humanhuman

TSL 5

Gene SHOC2, Length 815 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOC2-205ENST00000489390 NISCHQ9Y2I1 1504 aa36.64■■■■□ 3.46
SHOC2-205ENST00000489390 ABCC9O60706 1549 aa33.77■■■■□ 3
SHOC2-205ENST00000489390 CCDC180Q9P1Z9 1646 aa33.25■■■□□ 2.91
SHOC2-205ENST00000489390 DNAJC5BQ9UF47 199 aa32.24■■■□□ 2.75
SHOC2-205ENST00000489390 RB1CC1Q8TDY2 1594 aa31.93■■■□□ 2.7
SHOC2-205ENST00000489390 NACADO15069 1562 aa31.56■■■□□ 2.64
SHOC2-205ENST00000489390 PABPN1Q86U42 306 aaKnown RBP eCLIP31.29■■■□□ 2.6
SHOC2-205ENST00000489390 UNC13AQ9UPW8 1703 aa31.24■■■□□ 2.59
SHOC2-205ENST00000489390 DCAF8L2P0C7V8 631 aa31.11■■■□□ 2.57
SHOC2-205ENST00000489390 BICRAQ9NZM4 1560 aa31.01■■■□□ 2.56
SHOC2-205ENST00000489390 MYO15BQ96JP2 1530 aa30.93■■■□□ 2.54
SHOC2-205ENST00000489390 SHROOM4Q9ULL8 1493 aa30.57■■■□□ 2.48
SHOC2-205ENST00000489390 CC2D2AQ9P2K1 1620 aa30.53■■■□□ 2.48
SHOC2-205ENST00000489390 CECR2Q9BXF3 1484 aa30.51■■■□□ 2.48
SHOC2-205ENST00000489390 EIF4G1Q04637 1599 aaKnown RBP30.3■■■□□ 2.44
SHOC2-205ENST00000489390 DCAF1Q9Y4B6 1507 aa30.27■■■□□ 2.44
SHOC2-205ENST00000489390 ZCCHC6Q5VYS8 1495 aaKnown RBP30.23■■■□□ 2.43
SHOC2-205ENST00000489390 SCRIBQ14160 1630 aa30.16■■■□□ 2.42
SHOC2-205ENST00000489390 DNAJC5Q9H3Z4 198 aa30.14■■■□□ 2.42
SHOC2-205ENST00000489390 CUX2O14529 1486 aa29.44■■■□□ 2.3
SHOC2-205ENST00000489390 ERCC6Q03468 1493 aa29.23■■■□□ 2.27
SHOC2-205ENST00000489390 NCAPD3P42695 1498 aa29.11■■■□□ 2.25
SHOC2-205ENST00000489390 ATAD2BQ9ULI0 1458 aa28.91■■■□□ 2.22
SHOC2-205ENST00000489390 HMGXB3Q12766 1538 aa28.86■■■□□ 2.21
SHOC2-205ENST00000489390 SMARCA2P51531 1590 aa28.83■■■□□ 2.21
SHOC2-205ENST00000489390 NESP48681 1621 aa28.83■■■□□ 2.21
SHOC2-205ENST00000489390 SMARCA4P51532 1647 aa28.75■■■□□ 2.19
SHOC2-205ENST00000489390 THOC2Q8NI27 1593 aaKnown RBP28.73■■■□□ 2.19
SHOC2-205ENST00000489390 BAZ1BQ9UIG0 1483 aaKnown RBP28.6■■■□□ 2.17
SHOC2-205ENST00000489390 LAMC3Q9Y6N6 1575 aa28.59■■■□□ 2.17
SHOC2-205ENST00000489390 BAZ1AQ9NRL2 1556 aaPredicted RBP28.5■■■□□ 2.15
SHOC2-205ENST00000489390 KIF21AQ7Z4S6 1674 aa28.5■■■□□ 2.15
SHOC2-205ENST00000489390 PEG3Q9GZU2 1588 aa28.5■■■□□ 2.15
SHOC2-205ENST00000489390 TRIM41Q8WV44 630 aa28.48■■■□□ 2.15
SHOC2-205ENST00000489390 PDS5BQ9NTI5 1447 aa28.42■■■□□ 2.14
SHOC2-205ENST00000489390 MRC2Q9UBG0 1479 aa28.21■■■□□ 2.11
SHOC2-205ENST00000489390 MROH2BQ7Z745 1585 aa28.2■■■□□ 2.11
SHOC2-205ENST00000489390 WDR62O43379 1518 aa28.18■■■□□ 2.1
SHOC2-205ENST00000489390 CADPSQ9ULU8 1353 aa28.17■■■□□ 2.1
SHOC2-205ENST00000489390 CEP164Q9UPV0 1460 aa27.95■■■□□ 2.07
SHOC2-205ENST00000489390 OSCARQ8IYS5 282 aa27.94■■■□□ 2.06
SHOC2-205ENST00000489390 FANCD2Q9BXW9 1451 aa27.86■■■□□ 2.05
SHOC2-205ENST00000489390 WIZO95785 1651 aa27.86■■■□□ 2.05
SHOC2-205ENST00000489390 CFTRP13569 1480 aa27.73■■■□□ 2.03
SHOC2-205ENST00000489390 RIMBP3CA6NJZ7 1639 aa27.69■■■□□ 2.02
SHOC2-205ENST00000489390 RIMBP3BA6NNM3 1639 aa27.69■■■□□ 2.02
SHOC2-205ENST00000489390 RIMBP3Q9UFD9 1639 aa27.69■■■□□ 2.02
SHOC2-205ENST00000489390 URB2Q14146 1524 aaKnown RBP27.67■■■□□ 2.02
SHOC2-205ENST00000489390 ARHGEF11O15085 1522 aa27.51■■■□□ 2
SHOC2-205ENST00000489390 PRDM2Q13029 1718 aa27.5■■□□□ 1.99
SHOC2-205ENST00000489390 TOP2AP11388 1531 aaKnown RBP27.46■■□□□ 1.99
SHOC2-205ENST00000489390 IFT140Q96RY7 1462 aa27.43■■□□□ 1.98
SHOC2-205ENST00000489390 ZNF608Q9ULD9 1512 aaPredicted RBP27.42■■□□□ 1.98
SHOC2-205ENST00000489390 RSF1Q96T23 1441 aaPredicted RBP27.37■■□□□ 1.97
SHOC2-205ENST00000489390 CYB5RLQ6IPT4 315 aa27.3■■□□□ 1.96
SHOC2-205ENST00000489390 EIF4G3O43432 1585 aaKnown RBP27.28■■□□□ 1.96
SHOC2-205ENST00000489390 TOPBP1Q92547 1522 aa27.26■■□□□ 1.96
SHOC2-205ENST00000489390 CHD1O14646 1710 aa27.23■■□□□ 1.95
SHOC2-205ENST00000489390 TRHP20396 242 aaPredicted RBP27.2■■□□□ 1.94
SHOC2-205ENST00000489390 ABCC8Q09428 1581 aa27.2■■□□□ 1.94
SHOC2-205ENST00000489390 ARAP1Q96P48 1450 aa27.19■■□□□ 1.94
SHOC2-205ENST00000489390 CCDC88BA6NC98 1476 aa27.13■■□□□ 1.93
SHOC2-205ENST00000489390 DNMBPQ6XZF7 1577 aa27.13■■□□□ 1.93
SHOC2-205ENST00000489390 TARBP1Q13395 1621 aaKnown RBP27.1■■□□□ 1.93
SHOC2-205ENST00000489390 AQRO60306 1485 aaKnown RBP eCLIP27.08■■□□□ 1.93
SHOC2-205ENST00000489390 FBLN2P98095 1184 aa27■■□□□ 1.91
SHOC2-205ENST00000489390 POLA1P09884 1462 aaPredicted RBP26.93■■□□□ 1.9
SHOC2-205ENST00000489390 AEBP2Q6ZN18 517 aaPredicted RBP26.91■■□□□ 1.9
SHOC2-205ENST00000489390 CLASP1Q7Z460 1538 aa26.88■■□□□ 1.89
SHOC2-205ENST00000489390 WDR97A6NE52 1622 aa26.83■■□□□ 1.88
SHOC2-205ENST00000489390 RAD54L2Q9Y4B4 1467 aa26.82■■□□□ 1.88
SHOC2-205ENST00000489390 SYNJ1O43426 1573 aa26.81■■□□□ 1.88
SHOC2-205ENST00000489390 TDRD9Q8NDG6 1382 aaKnown RBP26.8■■□□□ 1.88
SHOC2-205ENST00000489390 SNAPC4Q5SXM2 1469 aa26.8■■□□□ 1.88
SHOC2-205ENST00000489390 SOGA1O94964 1423 aa26.79■■□□□ 1.88
SHOC2-205ENST00000489390 MAGI1Q96QZ7 1491 aaPredicted RBP26.74■■□□□ 1.87
SHOC2-205ENST00000489390 CHMP7Q8WUX9 453 aaPredicted RBP26.72■■□□□ 1.87
SHOC2-205ENST00000489390 FGD5Q6ZNL6 1462 aa26.67■■□□□ 1.86
SHOC2-205ENST00000489390 GRIN2BQ13224 1484 aa26.66■■□□□ 1.86
SHOC2-205ENST00000489390 SYNJ2O15056 1496 aa26.65■■□□□ 1.86
SHOC2-205ENST00000489390 GAPVD1Q14C86 1478 aa26.62■■□□□ 1.85
SHOC2-205ENST00000489390 PBRM1Q86U86 1689 aa26.55■■□□□ 1.84
SHOC2-205ENST00000489390 CUX1P39880 1505 aa26.55■■□□□ 1.84
SHOC2-205ENST00000489390 ABCA5Q8WWZ7 1642 aa26.39■■□□□ 1.82
SHOC2-205ENST00000489390 ERCC6L2Q5T890 1561 aa26.37■■□□□ 1.81
SHOC2-205ENST00000489390 ABCA10Q8WWZ4 1543 aa26.35■■□□□ 1.81
SHOC2-205ENST00000489390 CEP170Q5SW79 1584 aa26.31■■□□□ 1.8
SHOC2-205ENST00000489390 GRIN2AQ12879 1464 aa26.3■■□□□ 1.8
SHOC2-205ENST00000489390 KIF13AQ9H1H9 1805 aa26.29■■□□□ 1.8
SHOC2-205ENST00000489390 SHROOM2Q13796 1616 aa26.25■■□□□ 1.79
SHOC2-205ENST00000489390 NUP160Q12769 1436 aa26.25■■□□□ 1.79
SHOC2-205ENST00000489390 ADAMTS12P58397 1594 aa26.23■■□□□ 1.79
SHOC2-205ENST00000489390 FHAD1B1AJZ9 1412 aa26.11■■□□□ 1.77
SHOC2-205ENST00000489390 WRNQ14191 1432 aaPredicted RBP eCLIP26.1■■□□□ 1.77
SHOC2-205ENST00000489390 PRG4Q92954 1404 aaPredicted RBP26.03■■□□□ 1.76
SHOC2-205ENST00000489390 ABCC10Q5T3U5 1492 aa26.02■■□□□ 1.76
SHOC2-205ENST00000489390 ERICH3Q5RHP9 1530 aa26.02■■□□□ 1.76
SHOC2-205ENST00000489390 BIVM-ERCC5R4GMW8 1640 aa26■■□□□ 1.75
SHOC2-205ENST00000489390 FAM69CQ0P6D2 419 aa25.98■■□□□ 1.75
SHOC2-205ENST00000489390 MAPKBP1O60336 1514 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms