RNA–Protein interactions for RNA: ENST00000420394.5

SSUH2-205, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 1 (best)

Gene SSUH2, Length 1,634 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-205ENST00000420394 NISCHQ9Y2I1 1504 aa44.91■■■■■ 4.78
SSUH2-205ENST00000420394 CCDC180Q9P1Z9 1646 aa38.98■■■■□ 3.83
SSUH2-205ENST00000420394 ZCCHC6Q5VYS8 1495 aaKnown RBP37.86■■■■□ 3.65
SSUH2-205ENST00000420394 DCAF1Q9Y4B6 1507 aa37.26■■■■□ 3.56
SSUH2-205ENST00000420394 SHROOM4Q9ULL8 1493 aa36.8■■■■□ 3.48
SSUH2-205ENST00000420394 DCAF8L2P0C7V8 631 aa36.74■■■■□ 3.47
SSUH2-205ENST00000420394 MYO15BQ96JP2 1530 aa36.66■■■■□ 3.46
SSUH2-205ENST00000420394 ABCC9O60706 1549 aa36.21■■■■□ 3.39
SSUH2-205ENST00000420394 NACADO15069 1562 aa36.2■■■■□ 3.39
SSUH2-205ENST00000420394 SCRIBQ14160 1630 aa35.77■■■■□ 3.32
SSUH2-205ENST00000420394 RB1CC1Q8TDY2 1594 aa35.73■■■■□ 3.31
SSUH2-205ENST00000420394 SUPT5HO00267 1087 aaKnown RBP35.71■■■■□ 3.31
SSUH2-205ENST00000420394 RSF1Q96T23 1441 aaPredicted RBP35■■■■□ 3.19
SSUH2-205ENST00000420394 UNC13AQ9UPW8 1703 aa34.86■■■■□ 3.17
SSUH2-205ENST00000420394 CECR2Q9BXF3 1484 aa34.73■■■■□ 3.15
SSUH2-205ENST00000420394 BAZ1AQ9NRL2 1556 aaPredicted RBP34.68■■■■□ 3.14
SSUH2-205ENST00000420394 MROH2BQ7Z745 1585 aa34.64■■■■□ 3.14
SSUH2-205ENST00000420394 BICRAQ9NZM4 1560 aa34.53■■■■□ 3.12
SSUH2-205ENST00000420394 CHIC1Q5VXU3 224 aa34.53■■■■□ 3.12
SSUH2-205ENST00000420394 SMARCA4P51532 1647 aa34.39■■■■□ 3.1
SSUH2-205ENST00000420394 WIZO95785 1651 aa34.35■■■■□ 3.09
SSUH2-205ENST00000420394 PABPN1Q86U42 306 aaKnown RBP eCLIP34.2■■■■□ 3.074e-7■■■□□ 16.6
SSUH2-205ENST00000420394 TOP2AP11388 1531 aaKnown RBP34.14■■■■□ 3.06
SSUH2-205ENST00000420394 PEG3Q9GZU2 1588 aa34.03■■■■□ 3.04
SSUH2-205ENST00000420394 SMARCA2P51531 1590 aa33.78■■■■□ 3
SSUH2-205ENST00000420394 CCDC88BA6NC98 1476 aa33.73■■■□□ 2.99
SSUH2-205ENST00000420394 EIF4G1Q04637 1599 aaKnown RBP33.72■■■□□ 2.99
SSUH2-205ENST00000420394 ATAD2BQ9ULI0 1458 aa33.71■■■□□ 2.99
SSUH2-205ENST00000420394 TRIM41Q8WV44 630 aa33.65■■■□□ 2.98
SSUH2-205ENST00000420394 BAZ1BQ9UIG0 1483 aaKnown RBP33.57■■■□□ 2.96
SSUH2-205ENST00000420394 HMGXB3Q12766 1538 aa33.41■■■□□ 2.94
SSUH2-205ENST00000420394 NCAPD3P42695 1498 aa33.38■■■□□ 2.93
SSUH2-205ENST00000420394 ABCC8Q09428 1581 aa33.11■■■□□ 2.89
SSUH2-205ENST00000420394 LOC105371045A0A1W2PR82 267 aa33.1■■■□□ 2.89
SSUH2-205ENST00000420394 WRNQ14191 1432 aaPredicted RBP eCLIP32.97■■■□□ 2.87
SSUH2-205ENST00000420394 EEA1Q15075 1411 aa32.92■■■□□ 2.86
SSUH2-205ENST00000420394 FAM9AQ8IZU1 332 aaPredicted RBP32.89■■■□□ 2.86
SSUH2-205ENST00000420394 CC2D2AQ9P2K1 1620 aa32.83■■■□□ 2.85
SSUH2-205ENST00000420394 CFTRP13569 1480 aa32.77■■■□□ 2.84
SSUH2-205ENST00000420394 SYNJ1O43426 1573 aa32.74■■■□□ 2.83
SSUH2-205ENST00000420394 TOP2BQ02880 1626 aa32.65■■■□□ 2.82
SSUH2-205ENST00000420394 SOGA1O94964 1423 aa32.63■■■□□ 2.81
SSUH2-205ENST00000420394 PRDM2Q13029 1718 aa32.62■■■□□ 2.81
SSUH2-205ENST00000420394 BIVM-ERCC5R4GMW8 1640 aa32.6■■■□□ 2.81
SSUH2-205ENST00000420394 CADPSQ9ULU8 1353 aa32.54■■■□□ 2.8
SSUH2-205ENST00000420394 CSRNP3Q8WYN3 585 aa32.53■■■□□ 2.8
SSUH2-205ENST00000420394 RUSC2Q8N2Y8 1516 aa32.41■■■□□ 2.78
SSUH2-205ENST00000420394 GOLGA3Q08378 1498 aa32.39■■■□□ 2.78
SSUH2-205ENST00000420394 TNIKQ9UKE5 1360 aa32.39■■■□□ 2.78
SSUH2-205ENST00000420394 CUX1P39880 1505 aa32.37■■■□□ 2.77
SSUH2-205ENST00000420394 KIF21BO75037 1637 aa32.36■■■□□ 2.77
SSUH2-205ENST00000420394 CEP164Q9UPV0 1460 aa32.35■■■□□ 2.77
SSUH2-205ENST00000420394 EHMT2Q96KQ7 1210 aa32.29■■■□□ 2.76
SSUH2-205ENST00000420394 TRIM26Q12899 539 aaPredicted RBP32.22■■■□□ 2.75
SSUH2-205ENST00000420394 PCGF6Q9BYE7 350 aa32.22■■■□□ 2.75
SSUH2-205ENST00000420394 CEP162Q5TB80 1403 aa32.19■■■□□ 2.74
SSUH2-205ENST00000420394 LAMC3Q9Y6N6 1575 aa32.16■■■□□ 2.74
SSUH2-205ENST00000420394 FANCD2Q9BXW9 1451 aa32.15■■■□□ 2.74
SSUH2-205ENST00000420394 KIF27Q86VH2 1401 aa32.14■■■□□ 2.74
SSUH2-205ENST00000420394 UBTFP17480 764 aaKnown RBP32.12■■■□□ 2.73
SSUH2-205ENST00000420394 ERICH3Q5RHP9 1530 aa32.09■■■□□ 2.73
SSUH2-205ENST00000420394 PRXQ9BXM0 1461 aa32.03■■■□□ 2.72
SSUH2-205ENST00000420394 DNMBPQ6XZF7 1577 aa32■■■□□ 2.71
SSUH2-205ENST00000420394 RAPGEF2Q9Y4G8 1499 aa31.97■■■□□ 2.71
SSUH2-205ENST00000420394 FGD5Q6ZNL6 1462 aa31.96■■■□□ 2.71
SSUH2-205ENST00000420394 NESP48681 1621 aa31.92■■■□□ 2.7
SSUH2-205ENST00000420394 PDS5BQ9NTI5 1447 aa31.91■■■□□ 2.7
SSUH2-205ENST00000420394 CUX2O14529 1486 aa31.86■■■□□ 2.69
SSUH2-205ENST00000420394 TOPBP1Q92547 1522 aa31.86■■■□□ 2.69
SSUH2-205ENST00000420394 CLIP1P30622 1438 aa31.85■■■□□ 2.69
SSUH2-205ENST00000420394 HRCP23327 699 aa31.81■■■□□ 2.68
SSUH2-205ENST00000420394 ABCA10Q8WWZ4 1543 aa31.76■■■□□ 2.68
SSUH2-205ENST00000420394 POLA1P09884 1462 aaPredicted RBP31.73■■■□□ 2.67
SSUH2-205ENST00000420394 IGF1RP08069 1367 aa31.72■■■□□ 2.67
SSUH2-205ENST00000420394 URB2Q14146 1524 aaKnown RBP31.68■■■□□ 2.66
SSUH2-205ENST00000420394 VPS8Q8N3P4 1428 aa31.68■■■□□ 2.66
SSUH2-205ENST00000420394 DNAJC5BQ9UF47 199 aa31.61■■■□□ 2.65
SSUH2-205ENST00000420394 CARMIL1Q5VZK9 1371 aa31.6■■■□□ 2.65
SSUH2-205ENST00000420394 KIF21AQ7Z4S6 1674 aa31.58■■■□□ 2.65
SSUH2-205ENST00000420394 RAD54L2Q9Y4B4 1467 aa31.56■■■□□ 2.64
SSUH2-205ENST00000420394 WDR97A6NE52 1622 aa31.55■■■□□ 2.64
SSUH2-205ENST00000420394 CUL7Q14999 1698 aa31.52■■■□□ 2.64
SSUH2-205ENST00000420394 MRC2Q9UBG0 1479 aa31.44■■■□□ 2.62
SSUH2-205ENST00000420394 PPARGC1BQ86YN6 1023 aaKnown RBP31.43■■■□□ 2.62
SSUH2-205ENST00000420394 ARAP1Q96P48 1450 aa31.42■■■□□ 2.62
SSUH2-205ENST00000420394 ABCA5Q8WWZ7 1642 aa31.42■■■□□ 2.62
SSUH2-205ENST00000420394 APLP2Q06481 763 aa31.4■■■□□ 2.62
SSUH2-205ENST00000420394 ZEB1P37275 1124 aaPredicted RBP31.35■■■□□ 2.61
SSUH2-205ENST00000420394 ARHGAP35Q9NRY4 1499 aa31.33■■■□□ 2.61
SSUH2-205ENST00000420394 GAPVD1Q14C86 1478 aa31.33■■■□□ 2.61
SSUH2-205ENST00000420394 TARBP1Q13395 1621 aaKnown RBP31.32■■■□□ 2.6
SSUH2-205ENST00000420394 RANGAP1P46060 587 aaPredicted RBP31.27■■■□□ 2.6
SSUH2-205ENST00000420394 WDR62O43379 1518 aa31.25■■■□□ 2.59
SSUH2-205ENST00000420394 TDRD9Q8NDG6 1382 aaKnown RBP31.22■■■□□ 2.59
SSUH2-205ENST00000420394 EFCAB5A4FU69 1503 aa31.19■■■□□ 2.58
SSUH2-205ENST00000420394 IFT140Q96RY7 1462 aa31.17■■■□□ 2.58
SSUH2-205ENST00000420394 CTTNBP2Q8WZ74 1663 aa31.17■■■□□ 2.58
SSUH2-205ENST00000420394 FHAD1B1AJZ9 1412 aa31.13■■■□□ 2.57
SSUH2-205ENST00000420394 MAP3K1Q13233 1512 aa31.11■■■□□ 2.57
SSUH2-205ENST00000420394 TTBK1Q5TCY1 1321 aaPredicted RBP31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms