RNA–Protein interactions for RNA: ENST00000529307.1

CAPRIN1-207, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAPRIN1, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-207ENST00000529307 NISCHQ9Y2I1 1504 aa37.19■■■■□ 3.54
CAPRIN1-207ENST00000529307 CCDC180Q9P1Z9 1646 aa32.22■■■□□ 2.75
CAPRIN1-207ENST00000529307 ZCCHC6Q5VYS8 1495 aaKnown RBP31.28■■■□□ 2.6
CAPRIN1-207ENST00000529307 DCAF8L2P0C7V8 631 aa30.76■■■□□ 2.51
CAPRIN1-207ENST00000529307 DCAF1Q9Y4B6 1507 aa30.67■■■□□ 2.5
CAPRIN1-207ENST00000529307 SHROOM4Q9ULL8 1493 aa30.62■■■□□ 2.49
CAPRIN1-207ENST00000529307 ABCC9O60706 1549 aa30.48■■■□□ 2.47
CAPRIN1-207ENST00000529307 MYO15BQ96JP2 1530 aa30.21■■■□□ 2.43
CAPRIN1-207ENST00000529307 NACADO15069 1562 aa29.99■■■□□ 2.39
CAPRIN1-207ENST00000529307 SCRIBQ14160 1630 aa29.8■■■□□ 2.36
CAPRIN1-207ENST00000529307 RB1CC1Q8TDY2 1594 aa29.7■■■□□ 2.34
CAPRIN1-207ENST00000529307 SUPT5HO00267 1087 aaKnown RBP29.53■■■□□ 2.32
CAPRIN1-207ENST00000529307 UNC13AQ9UPW8 1703 aa29.17■■■□□ 2.26
CAPRIN1-207ENST00000529307 CECR2Q9BXF3 1484 aa28.98■■■□□ 2.23
CAPRIN1-207ENST00000529307 RSF1Q96T23 1441 aaPredicted RBP28.98■■■□□ 2.23
CAPRIN1-207ENST00000529307 BICRAQ9NZM4 1560 aa28.91■■■□□ 2.22
CAPRIN1-207ENST00000529307 PABPN1Q86U42 306 aaKnown RBP eCLIP28.85■■■□□ 2.21
CAPRIN1-207ENST00000529307 MROH2BQ7Z745 1585 aa28.8■■■□□ 2.2
CAPRIN1-207ENST00000529307 BAZ1AQ9NRL2 1556 aaPredicted RBP28.65■■■□□ 2.18
CAPRIN1-207ENST00000529307 WIZO95785 1651 aa28.56■■■□□ 2.16
CAPRIN1-207ENST00000529307 SMARCA4P51532 1647 aa28.53■■■□□ 2.16
CAPRIN1-207ENST00000529307 CHIC1Q5VXU3 224 aa28.35■■■□□ 2.13
CAPRIN1-207ENST00000529307 TOP2AP11388 1531 aaKnown RBP28.2■■■□□ 2.1
CAPRIN1-207ENST00000529307 PEG3Q9GZU2 1588 aa28.15■■■□□ 2.1
CAPRIN1-207ENST00000529307 ATAD2BQ9ULI0 1458 aa28.05■■■□□ 2.08
CAPRIN1-207ENST00000529307 EIF4G1Q04637 1599 aaKnown RBP27.99■■■□□ 2.07
CAPRIN1-207ENST00000529307 CCDC88BA6NC98 1476 aa27.99■■■□□ 2.07
CAPRIN1-207ENST00000529307 SMARCA2P51531 1590 aa27.98■■■□□ 2.07
CAPRIN1-207ENST00000529307 BAZ1BQ9UIG0 1483 aaKnown RBP27.87■■■□□ 2.05
CAPRIN1-207ENST00000529307 NCAPD3P42695 1498 aa27.74■■■□□ 2.03
CAPRIN1-207ENST00000529307 HMGXB3Q12766 1538 aa27.68■■■□□ 2.02
CAPRIN1-207ENST00000529307 TRIM41Q8WV44 630 aa27.67■■■□□ 2.02
CAPRIN1-207ENST00000529307 CC2D2AQ9P2K1 1620 aa27.54■■■□□ 2
CAPRIN1-207ENST00000529307 ABCC8Q09428 1581 aa27.49■■□□□ 1.99
CAPRIN1-207ENST00000529307 LOC105371045A0A1W2PR82 267 aa27.35■■□□□ 1.97
CAPRIN1-207ENST00000529307 FAM9AQ8IZU1 332 aaPredicted RBP27.28■■□□□ 1.96
CAPRIN1-207ENST00000529307 WRNQ14191 1432 aaPredicted RBP eCLIP27.23■■□□□ 1.95
CAPRIN1-207ENST00000529307 CFTRP13569 1480 aa27.2■■□□□ 1.94
CAPRIN1-207ENST00000529307 SYNJ1O43426 1573 aa27.14■■□□□ 1.94
CAPRIN1-207ENST00000529307 PELP1Q8IZL8 1130 aaKnown RBP27.14■■□□□ 1.94
CAPRIN1-207ENST00000529307 CADPSQ9ULU8 1353 aa27.07■■□□□ 1.92
CAPRIN1-207ENST00000529307 SOGA1O94964 1423 aa27.04■■□□□ 1.92
CAPRIN1-207ENST00000529307 DNAJC5BQ9UF47 199 aa27.01■■□□□ 1.91
CAPRIN1-207ENST00000529307 TOP2BQ02880 1626 aa26.96■■□□□ 1.91
CAPRIN1-207ENST00000529307 RUSC2Q8N2Y8 1516 aa26.95■■□□□ 1.91
CAPRIN1-207ENST00000529307 PRDM2Q13029 1718 aa26.95■■□□□ 1.9
CAPRIN1-207ENST00000529307 EHMT2Q96KQ7 1210 aa26.95■■□□□ 1.9
CAPRIN1-207ENST00000529307 HRCP23327 699 aa26.94■■□□□ 1.9
CAPRIN1-207ENST00000529307 BIVM-ERCC5R4GMW8 1640 aa26.9■■□□□ 1.9
CAPRIN1-207ENST00000529307 CUX1P39880 1505 aa26.9■■□□□ 1.9
CAPRIN1-207ENST00000529307 NESP48681 1621 aa26.86■■□□□ 1.89
CAPRIN1-207ENST00000529307 EEA1Q15075 1411 aa26.84■■□□□ 1.89
CAPRIN1-207ENST00000529307 CSRNP3Q8WYN3 585 aa26.79■■□□□ 1.88
CAPRIN1-207ENST00000529307 FANCD2Q9BXW9 1451 aa26.77■■□□□ 1.88
CAPRIN1-207ENST00000529307 LAMC3Q9Y6N6 1575 aa26.71■■□□□ 1.87
CAPRIN1-207ENST00000529307 FGD5Q6ZNL6 1462 aa26.56■■□□□ 1.84
CAPRIN1-207ENST00000529307 CEP164Q9UPV0 1460 aa26.55■■□□□ 1.84
CAPRIN1-207ENST00000529307 GOLGA3Q08378 1498 aa26.54■■□□□ 1.84
CAPRIN1-207ENST00000529307 KIF21BO75037 1637 aa26.53■■□□□ 1.84
CAPRIN1-207ENST00000529307 DNMBPQ6XZF7 1577 aa26.52■■□□□ 1.84
CAPRIN1-207ENST00000529307 PDS5BQ9NTI5 1447 aa26.52■■□□□ 1.84
CAPRIN1-207ENST00000529307 TNIKQ9UKE5 1360 aa26.52■■□□□ 1.84
CAPRIN1-207ENST00000529307 TOPBP1Q92547 1522 aa26.51■■□□□ 1.83
CAPRIN1-207ENST00000529307 KIF27Q86VH2 1401 aa26.49■■□□□ 1.83
CAPRIN1-207ENST00000529307 UBTFP17480 764 aaKnown RBP26.48■■□□□ 1.83
CAPRIN1-207ENST00000529307 URB2Q14146 1524 aaKnown RBP26.46■■□□□ 1.83
CAPRIN1-207ENST00000529307 RAPGEF2Q9Y4G8 1499 aa26.45■■□□□ 1.82
CAPRIN1-207ENST00000529307 KIF21AQ7Z4S6 1674 aa26.45■■□□□ 1.82
CAPRIN1-207ENST00000529307 CUX2O14529 1486 aa26.43■■□□□ 1.82
CAPRIN1-207ENST00000529307 CEP162Q5TB80 1403 aa26.43■■□□□ 1.82
CAPRIN1-207ENST00000529307 POLA1P09884 1462 aaPredicted RBP26.41■■□□□ 1.82
CAPRIN1-207ENST00000529307 PRXQ9BXM0 1461 aa26.4■■□□□ 1.82
CAPRIN1-207ENST00000529307 RAD54L2Q9Y4B4 1467 aa26.38■■□□□ 1.81
CAPRIN1-207ENST00000529307 MYT1Q01538 1121 aa26.37■■□□□ 1.81
CAPRIN1-207ENST00000529307 IGF1RP08069 1367 aa26.31■■□□□ 1.8
CAPRIN1-207ENST00000529307 ERICH3Q5RHP9 1530 aa26.31■■□□□ 1.8
CAPRIN1-207ENST00000529307 ABCA10Q8WWZ4 1543 aa26.3■■□□□ 1.8
CAPRIN1-207ENST00000529307 PCGF6Q9BYE7 350 aa26.24■■□□□ 1.79
CAPRIN1-207ENST00000529307 MRC2Q9UBG0 1479 aa26.19■■□□□ 1.78
CAPRIN1-207ENST00000529307 WDR97A6NE52 1622 aa26.17■■□□□ 1.78
CAPRIN1-207ENST00000529307 CLIP1P30622 1438 aa26.17■■□□□ 1.78
CAPRIN1-207ENST00000529307 CARMIL1Q5VZK9 1371 aa26.15■■□□□ 1.78
CAPRIN1-207ENST00000529307 TDRD9Q8NDG6 1382 aaKnown RBP26.1■■□□□ 1.77
CAPRIN1-207ENST00000529307 TRIM26Q12899 539 aaPredicted RBP26.1■■□□□ 1.77
CAPRIN1-207ENST00000529307 PPARGC1BQ86YN6 1023 aaKnown RBP26.09■■□□□ 1.77
CAPRIN1-207ENST00000529307 TARBP1Q13395 1621 aaKnown RBP26.09■■□□□ 1.77
CAPRIN1-207ENST00000529307 RANGAP1P46060 587 aaPredicted RBP26.09■■□□□ 1.77
CAPRIN1-207ENST00000529307 ABCA5Q8WWZ7 1642 aa26.06■■□□□ 1.76
CAPRIN1-207ENST00000529307 WDR62O43379 1518 aa26.05■■□□□ 1.76
CAPRIN1-207ENST00000529307 ERCC6Q03468 1493 aa26.04■■□□□ 1.76
CAPRIN1-207ENST00000529307 GAPVD1Q14C86 1478 aa26.01■■□□□ 1.75
CAPRIN1-207ENST00000529307 CUL7Q14999 1698 aa25.96■■□□□ 1.75
CAPRIN1-207ENST00000529307 THOC2Q8NI27 1593 aaKnown RBP25.95■■□□□ 1.74
CAPRIN1-207ENST00000529307 VPS8Q8N3P4 1428 aa25.94■■□□□ 1.74
CAPRIN1-207ENST00000529307 ARAP1Q96P48 1450 aa25.92■■□□□ 1.74
CAPRIN1-207ENST00000529307 AQRO60306 1485 aaKnown RBP eCLIP25.9■■□□□ 1.745e-7■■■■■ 29.8
CAPRIN1-207ENST00000529307 IFT140Q96RY7 1462 aa25.89■■□□□ 1.73
CAPRIN1-207ENST00000529307 ARHGAP35Q9NRY4 1499 aa25.87■■□□□ 1.73
CAPRIN1-207ENST00000529307 ZNF608Q9ULD9 1512 aaPredicted RBP25.86■■□□□ 1.73
CAPRIN1-207ENST00000529307 TTBK1Q5TCY1 1321 aaPredicted RBP25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms