RNA–Protein interactions for RNA: ENST00000435138.5

SSUH2-207, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 2

Gene SSUH2, Length 2,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-207ENST00000435138 NISCHQ9Y2I1 1504 aa26.38■■□□□ 1.81
SSUH2-207ENST00000435138 PELP1Q8IZL8 1130 aaKnown RBP22.87■■□□□ 1.25
SSUH2-207ENST00000435138 DCAF8L2P0C7V8 631 aa22.64■■□□□ 1.21
SSUH2-207ENST00000435138 CCDC180Q9P1Z9 1646 aa22.56■■□□□ 1.2
SSUH2-207ENST00000435138 SHROOM4Q9ULL8 1493 aa22.44■■□□□ 1.18
SSUH2-207ENST00000435138 MYT1Q01538 1121 aa22.3■■□□□ 1.16
SSUH2-207ENST00000435138 ZCCHC6Q5VYS8 1495 aaKnown RBP22.12■■□□□ 1.13
SSUH2-207ENST00000435138 HRCP23327 699 aa22.09■■□□□ 1.13
SSUH2-207ENST00000435138 ABCC9O60706 1549 aa22.03■■□□□ 1.12
SSUH2-207ENST00000435138 SUPT5HO00267 1087 aaKnown RBP21.61■■□□□ 1.05
SSUH2-207ENST00000435138 PPARGC1BQ86YN6 1023 aaKnown RBP21.53■■□□□ 1.04
SSUH2-207ENST00000435138 SCAF1Q9H7N4 1312 aaKnown RBP21.46■■□□□ 1.03
SSUH2-207ENST00000435138 SCRIBQ14160 1630 aa21.4■■□□□ 1.02
SSUH2-207ENST00000435138 DCAF1Q9Y4B6 1507 aa21.4■■□□□ 1.02
SSUH2-207ENST00000435138 TTBK1Q5TCY1 1321 aaPredicted RBP21.28■■□□□ 1
SSUH2-207ENST00000435138 NACADO15069 1562 aa21.1■□□□□ 0.97
SSUH2-207ENST00000435138 PABPN1Q86U42 306 aaKnown RBP eCLIP21.06■□□□□ 0.964e-7■■■□□ 16.6
SSUH2-207ENST00000435138 PCGF6Q9BYE7 350 aa21.05■□□□□ 0.96
SSUH2-207ENST00000435138 MYO15BQ96JP2 1530 aa21■□□□□ 0.95
SSUH2-207ENST00000435138 RB1CC1Q8TDY2 1594 aa20.99■□□□□ 0.95
SSUH2-207ENST00000435138 CECR2Q9BXF3 1484 aa20.84■□□□□ 0.93
SSUH2-207ENST00000435138 UNC13AQ9UPW8 1703 aa20.75■□□□□ 0.91
SSUH2-207ENST00000435138 PRKCSHP14314 528 aaPredicted RBP20.73■□□□□ 0.91
SSUH2-207ENST00000435138 BCL11AQ9H165 835 aa20.71■□□□□ 0.91
SSUH2-207ENST00000435138 RSF1Q96T23 1441 aaPredicted RBP20.68■□□□□ 0.9
SSUH2-207ENST00000435138 ACIN1Q9UKV3 1341 aaKnown RBP20.62■□□□□ 0.89
SSUH2-207ENST00000435138 MROH2BQ7Z745 1585 aa20.6■□□□□ 0.89
SSUH2-207ENST00000435138 BICRAQ9NZM4 1560 aa20.54■□□□□ 0.88
SSUH2-207ENST00000435138 FAM9AQ8IZU1 332 aaPredicted RBP20.52■□□□□ 0.87
SSUH2-207ENST00000435138 NEUROD1Q13562 356 aa20.5■□□□□ 0.87
SSUH2-207ENST00000435138 GTF3C3Q9Y5Q9 886 aa20.47■□□□□ 0.87
SSUH2-207ENST00000435138 WIZO95785 1651 aa20.46■□□□□ 0.87
SSUH2-207ENST00000435138 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
SSUH2-207ENST00000435138 CENPBP07199 599 aaPredicted RBP20.4■□□□□ 0.86
SSUH2-207ENST00000435138 ZEB1P37275 1124 aaPredicted RBP20.36■□□□□ 0.85
SSUH2-207ENST00000435138 BAZ1AQ9NRL2 1556 aaPredicted RBP20.26■□□□□ 0.83
SSUH2-207ENST00000435138 SMARCA4P51532 1647 aa20.24■□□□□ 0.83
SSUH2-207ENST00000435138 ERICH6Q7L0X2 663 aa20.21■□□□□ 0.83
SSUH2-207ENST00000435138 EHMT2Q96KQ7 1210 aa20.16■□□□□ 0.82
SSUH2-207ENST00000435138 TRIM26Q12899 539 aaPredicted RBP20.14■□□□□ 0.81
SSUH2-207ENST00000435138 APLP2Q06481 763 aa20.13■□□□□ 0.81
SSUH2-207ENST00000435138 LOC105371045A0A1W2PR82 267 aa20.03■□□□□ 0.8
SSUH2-207ENST00000435138 ANP32EQ9BTT0 268 aa20.02■□□□□ 0.8
SSUH2-207ENST00000435138 TRIM41Q8WV44 630 aa20.01■□□□□ 0.79
SSUH2-207ENST00000435138 CCDC88BA6NC98 1476 aa20■□□□□ 0.79
SSUH2-207ENST00000435138 ATAD2BQ9ULI0 1458 aa19.96■□□□□ 0.79
SSUH2-207ENST00000435138 TOP2AP11388 1531 aaKnown RBP19.94■□□□□ 0.78
SSUH2-207ENST00000435138 EIF4G1Q04637 1599 aaKnown RBP19.92■□□□□ 0.78
SSUH2-207ENST00000435138 SMARCA2P51531 1590 aa19.89■□□□□ 0.77
SSUH2-207ENST00000435138 BAZ1BQ9UIG0 1483 aaKnown RBP19.88■□□□□ 0.77
SSUH2-207ENST00000435138 CSRNP3Q8WYN3 585 aa19.83■□□□□ 0.77
SSUH2-207ENST00000435138 DNAJC5BQ9UF47 199 aa19.83■□□□□ 0.77
SSUH2-207ENST00000435138 ABCC8Q09428 1581 aa19.83■□□□□ 0.76
SSUH2-207ENST00000435138 PEG3Q9GZU2 1588 aa19.73■□□□□ 0.75
SSUH2-207ENST00000435138 CC2D2AQ9P2K1 1620 aa19.67■□□□□ 0.74
SSUH2-207ENST00000435138 DIEXFQ68CQ4 756 aaKnown RBP19.67■□□□□ 0.74
SSUH2-207ENST00000435138 NCAPD3P42695 1498 aa19.61■□□□□ 0.73
SSUH2-207ENST00000435138 SOGA1O94964 1423 aa19.5■□□□□ 0.71
SSUH2-207ENST00000435138 RUSC2Q8N2Y8 1516 aa19.49■□□□□ 0.71
SSUH2-207ENST00000435138 TSHZ2Q9NRE2 1034 aa19.47■□□□□ 0.71
SSUH2-207ENST00000435138 HMGXB3Q12766 1538 aa19.46■□□□□ 0.71
SSUH2-207ENST00000435138 WRNQ14191 1432 aaPredicted RBP eCLIP19.44■□□□□ 0.7
SSUH2-207ENST00000435138 NESP48681 1621 aa19.41■□□□□ 0.7
SSUH2-207ENST00000435138 SYNJ1O43426 1573 aa19.4■□□□□ 0.7
SSUH2-207ENST00000435138 YTHDC1Q96MU7 727 aaKnown RBP19.39■□□□□ 0.7
SSUH2-207ENST00000435138 RANGAP1P46060 587 aaPredicted RBP19.37■□□□□ 0.69
SSUH2-207ENST00000435138 ANO8Q9HCE9 1232 aaPredicted RBP19.3■□□□□ 0.68
SSUH2-207ENST00000435138 CFTRP13569 1480 aa19.28■□□□□ 0.68
SSUH2-207ENST00000435138 CADPSQ9ULU8 1353 aa19.28■□□□□ 0.68
SSUH2-207ENST00000435138 SUPT16HQ9Y5B9 1047 aaKnown RBP19.25■□□□□ 0.67
SSUH2-207ENST00000435138 UBTFP17480 764 aaKnown RBP19.23■□□□□ 0.67
SSUH2-207ENST00000435138 CLSPNQ9HAW4 1339 aa19.2■□□□□ 0.66
SSUH2-207ENST00000435138 CUX1P39880 1505 aa19.19■□□□□ 0.66
SSUH2-207ENST00000435138 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.14■□□□□ 0.65
SSUH2-207ENST00000435138 CCER1Q8TC90 406 aaPredicted RBP19.12■□□□□ 0.65
SSUH2-207ENST00000435138 FANCD2Q9BXW9 1451 aa19.12■□□□□ 0.65
SSUH2-207ENST00000435138 SLC24A1O60721 1099 aa19.09■□□□□ 0.65
SSUH2-207ENST00000435138 UBE2Q2Q8WVN8 375 aa19.09■□□□□ 0.65
SSUH2-207ENST00000435138 TOP2BQ02880 1626 aa19.08■□□□□ 0.65
SSUH2-207ENST00000435138 MIER1Q8N108 512 aa19.07■□□□□ 0.64
SSUH2-207ENST00000435138 ZNF316A6NFI3 1004 aaPredicted RBP19.05■□□□□ 0.64
SSUH2-207ENST00000435138 RAD54L2Q9Y4B4 1467 aa19.01■□□□□ 0.63
SSUH2-207ENST00000435138 RAPGEF2Q9Y4G8 1499 aa18.99■□□□□ 0.63
SSUH2-207ENST00000435138 FGD5Q6ZNL6 1462 aa18.99■□□□□ 0.63
SSUH2-207ENST00000435138 BIVM-ERCC5R4GMW8 1640 aa18.96■□□□□ 0.63
SSUH2-207ENST00000435138 SALL2Q9Y467 1007 aaPredicted RBP18.96■□□□□ 0.63
SSUH2-207ENST00000435138 CUX2O14529 1486 aa18.95■□□□□ 0.62
SSUH2-207ENST00000435138 CEP162Q5TB80 1403 aa18.93■□□□□ 0.62
SSUH2-207ENST00000435138 EIF5BO60841 1220 aaKnown RBP18.92■□□□□ 0.62
SSUH2-207ENST00000435138 CEP164Q9UPV0 1460 aa18.91■□□□□ 0.62
SSUH2-207ENST00000435138 URB2Q14146 1524 aaKnown RBP18.9■□□□□ 0.62
SSUH2-207ENST00000435138 RBM19Q9Y4C8 960 aaKnown RBP18.9■□□□□ 0.62
SSUH2-207ENST00000435138 PRDM2Q13029 1718 aa18.9■□□□□ 0.62
SSUH2-207ENST00000435138 KIF21AQ7Z4S6 1674 aa18.9■□□□□ 0.62
SSUH2-207ENST00000435138 TDRD9Q8NDG6 1382 aaKnown RBP18.88■□□□□ 0.61
SSUH2-207ENST00000435138 TOPBP1Q92547 1522 aa18.88■□□□□ 0.61
SSUH2-207ENST00000435138 MSH5O43196 834 aa18.87■□□□□ 0.61
SSUH2-207ENST00000435138 GOLGA3Q08378 1498 aa18.87■□□□□ 0.61
SSUH2-207ENST00000435138 EEA1Q15075 1411 aa18.87■□□□□ 0.61
SSUH2-207ENST00000435138 POLA1P09884 1462 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms