RNA–Protein interactions for RNA: ENST00000430825.3

LMBR1-206, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 1,208 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-206ENST00000430825 NISCHQ9Y2I1 1504 aa42.87■■■■■ 4.45
LMBR1-206ENST00000430825 ABCC9O60706 1549 aa39.24■■■■□ 3.87
LMBR1-206ENST00000430825 CCDC180Q9P1Z9 1646 aa38.71■■■■□ 3.79
LMBR1-206ENST00000430825 DNAJC5BQ9UF47 199 aa37.32■■■■□ 3.56
LMBR1-206ENST00000430825 RB1CC1Q8TDY2 1594 aa37.16■■■■□ 3.54
LMBR1-206ENST00000430825 NACADO15069 1562 aa36.78■■■■□ 3.48
LMBR1-206ENST00000430825 PABPN1Q86U42 306 aaKnown RBP eCLIP36.46■■■■□ 3.43
LMBR1-206ENST00000430825 DCAF8L2P0C7V8 631 aa36.44■■■■□ 3.42
LMBR1-206ENST00000430825 UNC13AQ9UPW8 1703 aa36.2■■■■□ 3.38
LMBR1-206ENST00000430825 MYO15BQ96JP2 1530 aa36.12■■■■□ 3.37
LMBR1-206ENST00000430825 BICRAQ9NZM4 1560 aa36.04■■■■□ 3.36
LMBR1-206ENST00000430825 SHROOM4Q9ULL8 1493 aa35.62■■■■□ 3.29
LMBR1-206ENST00000430825 CECR2Q9BXF3 1484 aa35.46■■■■□ 3.27
LMBR1-206ENST00000430825 CC2D2AQ9P2K1 1620 aa35.43■■■■□ 3.26
LMBR1-206ENST00000430825 DCAF1Q9Y4B6 1507 aa35.42■■■■□ 3.26
LMBR1-206ENST00000430825 ZCCHC6Q5VYS8 1495 aaKnown RBP35.4■■■■□ 3.26
LMBR1-206ENST00000430825 EIF4G1Q04637 1599 aaKnown RBP35.22■■■■□ 3.23
LMBR1-206ENST00000430825 SCRIBQ14160 1630 aa35.19■■■■□ 3.22
LMBR1-206ENST00000430825 DNAJC5Q9H3Z4 198 aa34.77■■■■□ 3.16
LMBR1-206ENST00000430825 CUX2O14529 1486 aa34.14■■■■□ 3.06
LMBR1-206ENST00000430825 ERCC6Q03468 1493 aa33.98■■■■□ 3.03
LMBR1-206ENST00000430825 NCAPD3P42695 1498 aa33.97■■■■□ 3.03
LMBR1-206ENST00000430825 ATAD2BQ9ULI0 1458 aa33.76■■■□□ 2.99
LMBR1-206ENST00000430825 SMARCA2P51531 1590 aa33.65■■■□□ 2.98
LMBR1-206ENST00000430825 HMGXB3Q12766 1538 aa33.64■■■□□ 2.98
LMBR1-206ENST00000430825 SMARCA4P51532 1647 aa33.54■■■□□ 2.96
LMBR1-206ENST00000430825 NESP48681 1621 aa33.53■■■□□ 2.96
LMBR1-206ENST00000430825 BAZ1BQ9UIG0 1483 aaKnown RBP33.4■■■□□ 2.94
LMBR1-206ENST00000430825 BAZ1AQ9NRL2 1556 aaPredicted RBP33.33■■■□□ 2.93
LMBR1-206ENST00000430825 THOC2Q8NI27 1593 aaKnown RBP33.31■■■□□ 2.92
LMBR1-206ENST00000430825 LAMC3Q9Y6N6 1575 aa33.27■■■□□ 2.92
LMBR1-206ENST00000430825 PEG3Q9GZU2 1588 aa33.26■■■□□ 2.91
LMBR1-206ENST00000430825 PDS5BQ9NTI5 1447 aa33.14■■■□□ 2.9
LMBR1-206ENST00000430825 KIF21AQ7Z4S6 1674 aa33.06■■■□□ 2.88
LMBR1-206ENST00000430825 MROH2BQ7Z745 1585 aa33■■■□□ 2.87
LMBR1-206ENST00000430825 TRIM41Q8WV44 630 aa32.96■■■□□ 2.87
LMBR1-206ENST00000430825 CADPSQ9ULU8 1353 aa32.91■■■□□ 2.86
LMBR1-206ENST00000430825 MRC2Q9UBG0 1479 aa32.85■■■□□ 2.85
LMBR1-206ENST00000430825 WDR62O43379 1518 aa32.77■■■□□ 2.84
LMBR1-206ENST00000430825 CEP164Q9UPV0 1460 aa32.61■■■□□ 2.81
LMBR1-206ENST00000430825 WIZO95785 1651 aa32.54■■■□□ 2.8
LMBR1-206ENST00000430825 FANCD2Q9BXW9 1451 aa32.51■■■□□ 2.79
LMBR1-206ENST00000430825 OSCARQ8IYS5 282 aa32.51■■■□□ 2.79
LMBR1-206ENST00000430825 CFTRP13569 1480 aa32.41■■■□□ 2.78
LMBR1-206ENST00000430825 URB2Q14146 1524 aaKnown RBP32.25■■■□□ 2.75
LMBR1-206ENST00000430825 TOP2AP11388 1531 aaKnown RBP32.15■■■□□ 2.74
LMBR1-206ENST00000430825 RSF1Q96T23 1441 aaPredicted RBP32.14■■■□□ 2.74
LMBR1-206ENST00000430825 RIMBP3CA6NJZ7 1639 aa32.04■■■□□ 2.72
LMBR1-206ENST00000430825 RIMBP3BA6NNM3 1639 aa32.04■■■□□ 2.72
LMBR1-206ENST00000430825 RIMBP3Q9UFD9 1639 aa32.04■■■□□ 2.72
LMBR1-206ENST00000430825 IFT140Q96RY7 1462 aa31.99■■■□□ 2.71
LMBR1-206ENST00000430825 PRDM2Q13029 1718 aa31.95■■■□□ 2.71
LMBR1-206ENST00000430825 ZNF608Q9ULD9 1512 aaPredicted RBP31.93■■■□□ 2.7
LMBR1-206ENST00000430825 ARHGEF11O15085 1522 aa31.92■■■□□ 2.7
LMBR1-206ENST00000430825 TOPBP1Q92547 1522 aa31.82■■■□□ 2.68
LMBR1-206ENST00000430825 CCDC88BA6NC98 1476 aa31.78■■■□□ 2.68
LMBR1-206ENST00000430825 ABCC8Q09428 1581 aa31.78■■■□□ 2.68
LMBR1-206ENST00000430825 CYB5RLQ6IPT4 315 aa31.75■■■□□ 2.67
LMBR1-206ENST00000430825 EIF4G3O43432 1585 aaKnown RBP31.72■■■□□ 2.67
LMBR1-206ENST00000430825 DNMBPQ6XZF7 1577 aa31.65■■■□□ 2.66
LMBR1-206ENST00000430825 AQRO60306 1485 aaKnown RBP eCLIP31.59■■■□□ 2.658e-8■■■□□ 16.7
LMBR1-206ENST00000430825 TRHP20396 242 aaPredicted RBP31.59■■■□□ 2.65
LMBR1-206ENST00000430825 CHD1O14646 1710 aa31.57■■■□□ 2.64
LMBR1-206ENST00000430825 TARBP1Q13395 1621 aaKnown RBP31.56■■■□□ 2.64
LMBR1-206ENST00000430825 ARAP1Q96P48 1450 aa31.55■■■□□ 2.64
LMBR1-206ENST00000430825 FBLN2P98095 1184 aa31.54■■■□□ 2.64
LMBR1-206ENST00000430825 POLA1P09884 1462 aaPredicted RBP31.46■■■□□ 2.63
LMBR1-206ENST00000430825 RAD54L2Q9Y4B4 1467 aa31.33■■■□□ 2.61
LMBR1-206ENST00000430825 SOGA1O94964 1423 aa31.32■■■□□ 2.61
LMBR1-206ENST00000430825 TDRD9Q8NDG6 1382 aaKnown RBP31.32■■■□□ 2.6
LMBR1-206ENST00000430825 WDR97A6NE52 1622 aa31.27■■■□□ 2.6
LMBR1-206ENST00000430825 SNAPC4Q5SXM2 1469 aa31.26■■■□□ 2.59
LMBR1-206ENST00000430825 CLASP1Q7Z460 1538 aa31.24■■■□□ 2.59
LMBR1-206ENST00000430825 CHMP7Q8WUX9 453 aaPredicted RBP31.24■■■□□ 2.59
LMBR1-206ENST00000430825 SYNJ1O43426 1573 aa31.21■■■□□ 2.59
LMBR1-206ENST00000430825 MAGI1Q96QZ7 1491 aaPredicted RBP31.2■■■□□ 2.58
LMBR1-206ENST00000430825 FGD5Q6ZNL6 1462 aa31.16■■■□□ 2.58
LMBR1-206ENST00000430825 GRIN2BQ13224 1484 aa31.13■■■□□ 2.57
LMBR1-206ENST00000430825 AEBP2Q6ZN18 517 aaPredicted RBP31.12■■■□□ 2.57
LMBR1-206ENST00000430825 SYNJ2O15056 1496 aa31.09■■■□□ 2.57
LMBR1-206ENST00000430825 CUX1P39880 1505 aa31.03■■■□□ 2.56
LMBR1-206ENST00000430825 GAPVD1Q14C86 1478 aa30.98■■■□□ 2.55
LMBR1-206ENST00000430825 PBRM1Q86U86 1689 aa30.88■■■□□ 2.53
LMBR1-206ENST00000430825 ABCA10Q8WWZ4 1543 aa30.81■■■□□ 2.52
LMBR1-206ENST00000430825 ABCA5Q8WWZ7 1642 aa30.77■■■□□ 2.52
LMBR1-206ENST00000430825 GRIN2AQ12879 1464 aa30.71■■■□□ 2.51
LMBR1-206ENST00000430825 ERCC6L2Q5T890 1561 aa30.66■■■□□ 2.5
LMBR1-206ENST00000430825 NUP160Q12769 1436 aa30.64■■■□□ 2.5
LMBR1-206ENST00000430825 CEP170Q5SW79 1584 aa30.62■■■□□ 2.49
LMBR1-206ENST00000430825 WRNQ14191 1432 aaPredicted RBP eCLIP30.6■■■□□ 2.49
LMBR1-206ENST00000430825 ADAMTS12P58397 1594 aa30.58■■■□□ 2.49
LMBR1-206ENST00000430825 FHAD1B1AJZ9 1412 aa30.54■■■□□ 2.48
LMBR1-206ENST00000430825 SHROOM2Q13796 1616 aa30.54■■■□□ 2.48
LMBR1-206ENST00000430825 ERICH3Q5RHP9 1530 aa30.42■■■□□ 2.46
LMBR1-206ENST00000430825 TOP2BQ02880 1626 aa30.4■■■□□ 2.46
LMBR1-206ENST00000430825 KIF13AQ9H1H9 1805 aa30.4■■■□□ 2.46
LMBR1-206ENST00000430825 BIVM-ERCC5R4GMW8 1640 aa30.39■■■□□ 2.46
LMBR1-206ENST00000430825 PRG4Q92954 1404 aaPredicted RBP30.39■■■□□ 2.45
LMBR1-206ENST00000430825 JPH4Q96JJ6 628 aa30.34■■■□□ 2.45
LMBR1-206ENST00000430825 NPM1P06748 294 aaKnown RBP eCLIP30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms