RNA–Protein interactions for RNA: ENST00000317371.8

SSUH2-201, Transcript of ssu-2 homolog (C. elegans), humanhuman

APPRIS P3 TSL 2 BASIC

Gene SSUH2, Length 2,561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-201ENST00000317371 NISCHQ9Y2I1 1504 aa26.48■■□□□ 1.83
SSUH2-201ENST00000317371 SHROOM4Q9ULL8 1493 aa22.63■■□□□ 1.21
SSUH2-201ENST00000317371 CCDC180Q9P1Z9 1646 aa22.63■■□□□ 1.21
SSUH2-201ENST00000317371 DCAF8L2P0C7V8 631 aa22.43■■□□□ 1.18
SSUH2-201ENST00000317371 ZCCHC6Q5VYS8 1495 aaKnown RBP22.3■■□□□ 1.16
SSUH2-201ENST00000317371 SUPT5HO00267 1087 aaKnown RBP21.85■■□□□ 1.09
SSUH2-201ENST00000317371 ABCC9O60706 1549 aa21.73■■□□□ 1.07
SSUH2-201ENST00000317371 DCAF1Q9Y4B6 1507 aa21.51■■□□□ 1.03
SSUH2-201ENST00000317371 SCRIBQ14160 1630 aa21.46■■□□□ 1.03
SSUH2-201ENST00000317371 NACADO15069 1562 aa21.02■□□□□ 0.96
SSUH2-201ENST00000317371 MYO15BQ96JP2 1530 aa21■□□□□ 0.95
SSUH2-201ENST00000317371 CECR2Q9BXF3 1484 aa20.88■□□□□ 0.93
SSUH2-201ENST00000317371 RB1CC1Q8TDY2 1594 aa20.86■□□□□ 0.93
SSUH2-201ENST00000317371 RSF1Q96T23 1441 aaPredicted RBP20.83■□□□□ 0.92
SSUH2-201ENST00000317371 CHIC1Q5VXU3 224 aa20.83■□□□□ 0.92
SSUH2-201ENST00000317371 UNC13AQ9UPW8 1703 aa20.75■□□□□ 0.91
SSUH2-201ENST00000317371 PABPN1Q86U42 306 aaKnown RBP eCLIP20.74■□□□□ 0.914e-7■■■□□ 16.6
SSUH2-201ENST00000317371 MROH2BQ7Z745 1585 aa20.7■□□□□ 0.9
SSUH2-201ENST00000317371 WIZO95785 1651 aa20.62■□□□□ 0.89
SSUH2-201ENST00000317371 BICRAQ9NZM4 1560 aa20.44■□□□□ 0.86
SSUH2-201ENST00000317371 LOC105371045A0A1W2PR82 267 aa20.39■□□□□ 0.85
SSUH2-201ENST00000317371 EHMT2Q96KQ7 1210 aa20.35■□□□□ 0.85
SSUH2-201ENST00000317371 BAZ1AQ9NRL2 1556 aaPredicted RBP20.33■□□□□ 0.85
SSUH2-201ENST00000317371 SMARCA4P51532 1647 aa20.32■□□□□ 0.84
SSUH2-201ENST00000317371 FAM9AQ8IZU1 332 aaPredicted RBP20.3■□□□□ 0.84
SSUH2-201ENST00000317371 TRIM41Q8WV44 630 aa20.21■□□□□ 0.83
SSUH2-201ENST00000317371 TOP2AP11388 1531 aaKnown RBP20.09■□□□□ 0.81
SSUH2-201ENST00000317371 CCDC88BA6NC98 1476 aa20.09■□□□□ 0.81
SSUH2-201ENST00000317371 SMARCA2P51531 1590 aa20.05■□□□□ 0.8
SSUH2-201ENST00000317371 ABCC8Q09428 1581 aa20.05■□□□□ 0.8
SSUH2-201ENST00000317371 EIF4G1Q04637 1599 aaKnown RBP20■□□□□ 0.79
SSUH2-201ENST00000317371 ATAD2BQ9ULI0 1458 aa19.89■□□□□ 0.78
SSUH2-201ENST00000317371 BAZ1BQ9UIG0 1483 aaKnown RBP19.83■□□□□ 0.77
SSUH2-201ENST00000317371 PCGF6Q9BYE7 350 aa19.82■□□□□ 0.76
SSUH2-201ENST00000317371 PEG3Q9GZU2 1588 aa19.79■□□□□ 0.76
SSUH2-201ENST00000317371 SOGA1O94964 1423 aa19.7■□□□□ 0.74
SSUH2-201ENST00000317371 RUSC2Q8N2Y8 1516 aa19.69■□□□□ 0.74
SSUH2-201ENST00000317371 PPARGC1BQ86YN6 1023 aaKnown RBP19.69■□□□□ 0.74
SSUH2-201ENST00000317371 SYNJ1O43426 1573 aa19.6■□□□□ 0.73
SSUH2-201ENST00000317371 WRNQ14191 1432 aaPredicted RBP eCLIP19.56■□□□□ 0.72
SSUH2-201ENST00000317371 TTBK1Q5TCY1 1321 aaPredicted RBP19.53■□□□□ 0.72
SSUH2-201ENST00000317371 NCAPD3P42695 1498 aa19.48■□□□□ 0.71
SSUH2-201ENST00000317371 CC2D2AQ9P2K1 1620 aa19.47■□□□□ 0.71
SSUH2-201ENST00000317371 HMGXB3Q12766 1538 aa19.44■□□□□ 0.7
SSUH2-201ENST00000317371 RANGAP1P46060 587 aaPredicted RBP19.43■□□□□ 0.7
SSUH2-201ENST00000317371 DNAJC5BQ9UF47 199 aa19.42■□□□□ 0.7
SSUH2-201ENST00000317371 UBTFP17480 764 aaKnown RBP19.37■□□□□ 0.69
SSUH2-201ENST00000317371 CSRNP3Q8WYN3 585 aa19.36■□□□□ 0.69
SSUH2-201ENST00000317371 TRIM26Q12899 539 aaPredicted RBP19.3■□□□□ 0.68
SSUH2-201ENST00000317371 CUX1P39880 1505 aa19.28■□□□□ 0.68
SSUH2-201ENST00000317371 CEP162Q5TB80 1403 aa19.28■□□□□ 0.68
SSUH2-201ENST00000317371 HRCP23327 699 aa19.28■□□□□ 0.68
SSUH2-201ENST00000317371 NESP48681 1621 aa19.25■□□□□ 0.67
SSUH2-201ENST00000317371 TOP2BQ02880 1626 aa19.25■□□□□ 0.67
SSUH2-201ENST00000317371 CFTRP13569 1480 aa19.25■□□□□ 0.67
SSUH2-201ENST00000317371 RAPGEF2Q9Y4G8 1499 aa19.21■□□□□ 0.67
SSUH2-201ENST00000317371 BIVM-ERCC5R4GMW8 1640 aa19.17■□□□□ 0.66
SSUH2-201ENST00000317371 GOLGA3Q08378 1498 aa19.16■□□□□ 0.66
SSUH2-201ENST00000317371 CADPSQ9ULU8 1353 aa19.14■□□□□ 0.65
SSUH2-201ENST00000317371 TNIKQ9UKE5 1360 aa19.13■□□□□ 0.65
SSUH2-201ENST00000317371 EEA1Q15075 1411 aa19.13■□□□□ 0.65
SSUH2-201ENST00000317371 CEP164Q9UPV0 1460 aa19.08■□□□□ 0.64
SSUH2-201ENST00000317371 PRDM2Q13029 1718 aa19.06■□□□□ 0.64
SSUH2-201ENST00000317371 KIF21BO75037 1637 aa19.05■□□□□ 0.64
SSUH2-201ENST00000317371 FANCD2Q9BXW9 1451 aa19.03■□□□□ 0.64
SSUH2-201ENST00000317371 FGD5Q6ZNL6 1462 aa19.01■□□□□ 0.63
SSUH2-201ENST00000317371 CLIP1P30622 1438 aa18.99■□□□□ 0.63
SSUH2-201ENST00000317371 CUX2O14529 1486 aa18.99■□□□□ 0.63
SSUH2-201ENST00000317371 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
SSUH2-201ENST00000317371 KIF27Q86VH2 1401 aa18.93■□□□□ 0.62
SSUH2-201ENST00000317371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.92■□□□□ 0.62
SSUH2-201ENST00000317371 PRXQ9BXM0 1461 aa18.91■□□□□ 0.62
SSUH2-201ENST00000317371 TOPBP1Q92547 1522 aa18.85■□□□□ 0.61
SSUH2-201ENST00000317371 KIF21AQ7Z4S6 1674 aa18.84■□□□□ 0.61
SSUH2-201ENST00000317371 POLA1P09884 1462 aaPredicted RBP18.84■□□□□ 0.61
SSUH2-201ENST00000317371 URB2Q14146 1524 aaKnown RBP18.84■□□□□ 0.61
SSUH2-201ENST00000317371 IGF1RP08069 1367 aa18.83■□□□□ 0.6
SSUH2-201ENST00000317371 ARAP1Q96P48 1450 aa18.79■□□□□ 0.6
SSUH2-201ENST00000317371 P3H3Q8IVL6 736 aa18.79■□□□□ 0.6
SSUH2-201ENST00000317371 VPS8Q8N3P4 1428 aa18.79■□□□□ 0.6
SSUH2-201ENST00000317371 DNMBPQ6XZF7 1577 aa18.79■□□□□ 0.6
SSUH2-201ENST00000317371 ERICH3Q5RHP9 1530 aa18.78■□□□□ 0.6
SSUH2-201ENST00000317371 TDRD9Q8NDG6 1382 aaKnown RBP18.76■□□□□ 0.59
SSUH2-201ENST00000317371 HNRNPUL2Q1KMD3 747 aaKnown RBP18.75■□□□□ 0.59
SSUH2-201ENST00000317371 LAMC3Q9Y6N6 1575 aa18.74■□□□□ 0.59
SSUH2-201ENST00000317371 CARMIL1Q5VZK9 1371 aa18.74■□□□□ 0.59
SSUH2-201ENST00000317371 PELP1Q8IZL8 1130 aaKnown RBP18.74■□□□□ 0.59
SSUH2-201ENST00000317371 KANK4Q5T7N3 995 aaPredicted RBP18.73■□□□□ 0.59
SSUH2-201ENST00000317371 ARHGAP35Q9NRY4 1499 aa18.7■□□□□ 0.58
SSUH2-201ENST00000317371 CCER1Q8TC90 406 aaPredicted RBP18.69■□□□□ 0.58
SSUH2-201ENST00000317371 APLP2Q06481 763 aa18.67■□□□□ 0.58
SSUH2-201ENST00000317371 ABCA10Q8WWZ4 1543 aa18.65■□□□□ 0.58
SSUH2-201ENST00000317371 PDS5BQ9NTI5 1447 aa18.64■□□□□ 0.57
SSUH2-201ENST00000317371 ATP1B4Q9UN42 357 aaPredicted RBP18.62■□□□□ 0.57
SSUH2-201ENST00000317371 WDR97A6NE52 1622 aa18.59■□□□□ 0.57
SSUH2-201ENST00000317371 FHOD3Q2V2M9 1422 aa18.56■□□□□ 0.56
SSUH2-201ENST00000317371 AQRO60306 1485 aaKnown RBP eCLIP18.56■□□□□ 0.561e-6■■■■□ 21.5
SSUH2-201ENST00000317371 ITGAEP38570 1179 aa18.53■□□□□ 0.56
SSUH2-201ENST00000317371 GAPVD1Q14C86 1478 aa18.53■□□□□ 0.56
SSUH2-201ENST00000317371 ABCA5Q8WWZ7 1642 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms