RNA–Protein interactions for RNA: ENST00000440972.1

SPRED2-205, Transcript of sprouty related EVH1 domain containing 2, humanhuman

TSL 3

Gene SPRED2, Length 555 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED2-205ENST00000440972 NISCHQ9Y2I1 1504 aa31.78■■■□□ 2.68
SPRED2-205ENST00000440972 ABCC9O60706 1549 aa29.16■■■□□ 2.26
SPRED2-205ENST00000440972 CCDC180Q9P1Z9 1646 aa28.65■■■□□ 2.18
SPRED2-205ENST00000440972 DNAJC5BQ9UF47 199 aa27.8■■■□□ 2.04
SPRED2-205ENST00000440972 RB1CC1Q8TDY2 1594 aa27.52■■■□□ 2
SPRED2-205ENST00000440972 NACADO15069 1562 aa27.22■■□□□ 1.95
SPRED2-205ENST00000440972 PABPN1Q86U42 306 aaKnown RBP eCLIP27.08■■□□□ 1.93
SPRED2-205ENST00000440972 DCAF8L2P0C7V8 631 aa26.96■■□□□ 1.91
SPRED2-205ENST00000440972 UNC13AQ9UPW8 1703 aa26.83■■□□□ 1.89
SPRED2-205ENST00000440972 BICRAQ9NZM4 1560 aa26.75■■□□□ 1.87
SPRED2-205ENST00000440972 MYO15BQ96JP2 1530 aa26.7■■□□□ 1.87
SPRED2-205ENST00000440972 ZCCHC6Q5VYS8 1495 aaKnown RBP26.38■■□□□ 1.81
SPRED2-205ENST00000440972 SHROOM4Q9ULL8 1493 aa26.37■■□□□ 1.81
SPRED2-205ENST00000440972 CECR2Q9BXF3 1484 aa26.33■■□□□ 1.81
SPRED2-205ENST00000440972 CC2D2AQ9P2K1 1620 aa26.3■■□□□ 1.8
SPRED2-205ENST00000440972 DCAF1Q9Y4B6 1507 aa26.26■■□□□ 1.79
SPRED2-205ENST00000440972 EIF4G1Q04637 1599 aaKnown RBP26.14■■□□□ 1.78
SPRED2-205ENST00000440972 SCRIBQ14160 1630 aa26.09■■□□□ 1.77
SPRED2-205ENST00000440972 DNAJC5Q9H3Z4 198 aa25.89■■□□□ 1.74
SPRED2-205ENST00000440972 CUX2O14529 1486 aa25.35■■□□□ 1.65
SPRED2-205ENST00000440972 ERCC6Q03468 1493 aa25.22■■□□□ 1.63
SPRED2-205ENST00000440972 NCAPD3P42695 1498 aa25.15■■□□□ 1.62
SPRED2-205ENST00000440972 ATAD2BQ9ULI0 1458 aa25.02■■□□□ 1.6
SPRED2-205ENST00000440972 HMGXB3Q12766 1538 aa24.92■■□□□ 1.58
SPRED2-205ENST00000440972 NESP48681 1621 aa24.91■■□□□ 1.58
SPRED2-205ENST00000440972 SMARCA2P51531 1590 aa24.9■■□□□ 1.58
SPRED2-205ENST00000440972 SMARCA4P51532 1647 aa24.84■■□□□ 1.57
SPRED2-205ENST00000440972 THOC2Q8NI27 1593 aaKnown RBP24.76■■□□□ 1.55
SPRED2-205ENST00000440972 BAZ1BQ9UIG0 1483 aaKnown RBP24.74■■□□□ 1.55
SPRED2-205ENST00000440972 BAZ1AQ9NRL2 1556 aaPredicted RBP24.65■■□□□ 1.54
SPRED2-205ENST00000440972 LAMC3Q9Y6N6 1575 aa24.65■■□□□ 1.54
SPRED2-205ENST00000440972 PEG3Q9GZU2 1588 aa24.62■■□□□ 1.53
SPRED2-205ENST00000440972 TRIM41Q8WV44 630 aa24.55■■□□□ 1.52
SPRED2-205ENST00000440972 PDS5BQ9NTI5 1447 aa24.54■■□□□ 1.52
SPRED2-205ENST00000440972 KIF21AQ7Z4S6 1674 aa24.53■■□□□ 1.52
SPRED2-205ENST00000440972 MROH2BQ7Z745 1585 aa24.5■■□□□ 1.51
SPRED2-205ENST00000440972 CADPSQ9ULU8 1353 aa24.37■■□□□ 1.49
SPRED2-205ENST00000440972 MRC2Q9UBG0 1479 aa24.36■■□□□ 1.49
SPRED2-205ENST00000440972 WDR62O43379 1518 aa24.32■■□□□ 1.48
SPRED2-205ENST00000440972 WIZO95785 1651 aa24.24■■□□□ 1.47
SPRED2-205ENST00000440972 CEP164Q9UPV0 1460 aa24.16■■□□□ 1.46
SPRED2-205ENST00000440972 RSF1Q96T23 1441 aaPredicted RBP24.1■■□□□ 1.45
SPRED2-205ENST00000440972 FANCD2Q9BXW9 1451 aa24.09■■□□□ 1.45
SPRED2-205ENST00000440972 OSCARQ8IYS5 282 aa24.09■■□□□ 1.45
SPRED2-205ENST00000440972 CFTRP13569 1480 aa24■■□□□ 1.43
SPRED2-205ENST00000440972 URB2Q14146 1524 aaKnown RBP23.93■■□□□ 1.42
SPRED2-205ENST00000440972 TOP2AP11388 1531 aaKnown RBP23.92■■□□□ 1.42
SPRED2-205ENST00000440972 RIMBP3CA6NJZ7 1639 aa23.82■■□□□ 1.4
SPRED2-205ENST00000440972 RIMBP3BA6NNM3 1639 aa23.82■■□□□ 1.4
SPRED2-205ENST00000440972 RIMBP3Q9UFD9 1639 aa23.82■■□□□ 1.4
SPRED2-205ENST00000440972 ARHGEF11O15085 1522 aa23.73■■□□□ 1.39
SPRED2-205ENST00000440972 ZNF608Q9ULD9 1512 aaPredicted RBP23.71■■□□□ 1.39
SPRED2-205ENST00000440972 IFT140Q96RY7 1462 aa23.7■■□□□ 1.38
SPRED2-205ENST00000440972 CCDC88BA6NC98 1476 aa23.67■■□□□ 1.38
SPRED2-205ENST00000440972 PRDM2Q13029 1718 aa23.62■■□□□ 1.37
SPRED2-205ENST00000440972 TOPBP1Q92547 1522 aa23.58■■□□□ 1.36
SPRED2-205ENST00000440972 CYB5RLQ6IPT4 315 aa23.56■■□□□ 1.36
SPRED2-205ENST00000440972 EIF4G3O43432 1585 aaKnown RBP23.54■■□□□ 1.36
SPRED2-205ENST00000440972 ABCC8Q09428 1581 aa23.48■■□□□ 1.35
SPRED2-205ENST00000440972 ARAP1Q96P48 1450 aa23.47■■□□□ 1.35
SPRED2-205ENST00000440972 TRHP20396 242 aaPredicted RBP23.46■■□□□ 1.35
SPRED2-205ENST00000440972 DNMBPQ6XZF7 1577 aa23.44■■□□□ 1.34
SPRED2-205ENST00000440972 AQRO60306 1485 aaKnown RBP eCLIP23.43■■□□□ 1.344e-6■■■■□ 21.3
SPRED2-205ENST00000440972 CHD1O14646 1710 aa23.41■■□□□ 1.34
SPRED2-205ENST00000440972 TARBP1Q13395 1621 aaKnown RBP23.39■■□□□ 1.33
SPRED2-205ENST00000440972 FBLN2P98095 1184 aa23.36■■□□□ 1.33
SPRED2-205ENST00000440972 SUPT5HO00267 1087 aaKnown RBP23.33■■□□□ 1.33
SPRED2-205ENST00000440972 POLA1P09884 1462 aaPredicted RBP23.31■■□□□ 1.32
SPRED2-205ENST00000440972 RAD54L2Q9Y4B4 1467 aa23.23■■□□□ 1.31
SPRED2-205ENST00000440972 TDRD9Q8NDG6 1382 aaKnown RBP23.21■■□□□ 1.31
SPRED2-205ENST00000440972 CLASP1Q7Z460 1538 aa23.19■■□□□ 1.3
SPRED2-205ENST00000440972 SNAPC4Q5SXM2 1469 aa23.18■■□□□ 1.3
SPRED2-205ENST00000440972 SOGA1O94964 1423 aa23.18■■□□□ 1.3
SPRED2-205ENST00000440972 AEBP2Q6ZN18 517 aaPredicted RBP23.14■■□□□ 1.29
SPRED2-205ENST00000440972 WDR97A6NE52 1622 aa23.12■■□□□ 1.29
SPRED2-205ENST00000440972 SYNJ1O43426 1573 aa23.12■■□□□ 1.29
SPRED2-205ENST00000440972 CHMP7Q8WUX9 453 aaPredicted RBP23.12■■□□□ 1.29
SPRED2-205ENST00000440972 MAGI1Q96QZ7 1491 aaPredicted RBP23.11■■□□□ 1.29
SPRED2-205ENST00000440972 FGD5Q6ZNL6 1462 aa23.09■■□□□ 1.29
SPRED2-205ENST00000440972 GRIN2BQ13224 1484 aa23.05■■□□□ 1.28
SPRED2-205ENST00000440972 SYNJ2O15056 1496 aa23.04■■□□□ 1.28
SPRED2-205ENST00000440972 CUX1P39880 1505 aa23.01■■□□□ 1.27
SPRED2-205ENST00000440972 GAPVD1Q14C86 1478 aa22.98■■□□□ 1.27
SPRED2-205ENST00000440972 PBRM1Q86U86 1689 aa22.87■■□□□ 1.25
SPRED2-205ENST00000440972 ABCA5Q8WWZ7 1642 aa22.8■■□□□ 1.24
SPRED2-205ENST00000440972 ABCA10Q8WWZ4 1543 aa22.8■■□□□ 1.24
SPRED2-205ENST00000440972 ERCC6L2Q5T890 1561 aa22.79■■□□□ 1.24
SPRED2-205ENST00000440972 GRIN2AQ12879 1464 aa22.75■■□□□ 1.23
SPRED2-205ENST00000440972 WRNQ14191 1432 aaPredicted RBP eCLIP22.74■■□□□ 1.239e-6■■■■■ 50.1
SPRED2-205ENST00000440972 NUP160Q12769 1436 aa22.71■■□□□ 1.23
SPRED2-205ENST00000440972 CEP170Q5SW79 1584 aa22.71■■□□□ 1.23
SPRED2-205ENST00000440972 TOP2BQ02880 1626 aa22.71■■□□□ 1.23
SPRED2-205ENST00000440972 BIVM-ERCC5R4GMW8 1640 aa22.71■■□□□ 1.23
SPRED2-205ENST00000440972 ADAMTS12P58397 1594 aa22.67■■□□□ 1.22
SPRED2-205ENST00000440972 SHROOM2Q13796 1616 aa22.63■■□□□ 1.21
SPRED2-205ENST00000440972 FHAD1B1AJZ9 1412 aa22.59■■□□□ 1.21
SPRED2-205ENST00000440972 KIF13AQ9H1H9 1805 aa22.56■■□□□ 1.2
SPRED2-205ENST00000440972 PRG4Q92954 1404 aaPredicted RBP22.51■■□□□ 1.19
SPRED2-205ENST00000440972 ERICH3Q5RHP9 1530 aa22.5■■□□□ 1.19
SPRED2-205ENST00000440972 ABCC10Q5T3U5 1492 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms