RNA–Protein interactions for RNA: ENST00000479383.5

ST3GAL3-223, Transcript of ST3 beta-galactoside alpha-2,3-sialyltransferase 3, human

TSL 3

Gene ST3GAL3, Length 873 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ST3GAL3-223	ENST00000479383	NISCH	Q9Y2I1	1504 aa		42.17	■■■■■ 4.34
ST3GAL3-223	ENST00000479383	ABCC9	O60706	1549 aa		38.07	■■■■□ 3.68
ST3GAL3-223	ENST00000479383	CCDC180	Q9P1Z9	1646 aa		37.92	■■■■□ 3.66
ST3GAL3-223	ENST00000479383	RB1CC1	Q8TDY2	1594 aa		36.08	■■■■□ 3.37
ST3GAL3-223	ENST00000479383	DNAJC5B	Q9UF47	199 aa		35.82	■■■■□ 3.32
ST3GAL3-223	ENST00000479383	NACAD	O15069	1562 aa		35.78	■■■■□ 3.32
ST3GAL3-223	ENST00000479383	UNC13A	Q9UPW8	1703 aa		35.57	■■■■□ 3.29
ST3GAL3-223	ENST00000479383	DCAF8L2	P0C7V8	631 aa		35.56	■■■■□ 3.28
ST3GAL3-223	ENST00000479383	PABPN1	Q86U42	306 aa	Known RBP eCLIP	35.38	■■■■□ 3.25
ST3GAL3-223	ENST00000479383	BICRA	Q9NZM4	1560 aa		35.21	■■■■□ 3.23
ST3GAL3-223	ENST00000479383	MYO15B	Q96JP2	1530 aa		35.19	■■■■□ 3.22
ST3GAL3-223	ENST00000479383	ZCCHC6	Q5VYS8	1495 aa	Known RBP	34.97	■■■■□ 3.19
ST3GAL3-223	ENST00000479383	DCAF1	Q9Y4B6	1507 aa		34.74	■■■■□ 3.15
ST3GAL3-223	ENST00000479383	SCRIB	Q14160	1630 aa		34.66	■■■■□ 3.14
ST3GAL3-223	ENST00000479383	SHROOM4	Q9ULL8	1493 aa		34.43	■■■■□ 3.1
ST3GAL3-223	ENST00000479383	CC2D2A	Q9P2K1	1620 aa		34.4	■■■■□ 3.1
ST3GAL3-223	ENST00000479383	EIF4G1	Q04637	1599 aa	Known RBP	34.28	■■■■□ 3.08
ST3GAL3-223	ENST00000479383	CECR2	Q9BXF3	1484 aa		34.22	■■■■□ 3.07
ST3GAL3-223	ENST00000479383	NCAPD3	P42695	1498 aa		33.02	■■■□□ 2.88
ST3GAL3-223	ENST00000479383	SMARCA4	P51532	1647 aa		32.99	■■■□□ 2.87
ST3GAL3-223	ENST00000479383	ATAD2B	Q9ULI0	1458 aa		32.97	■■■□□ 2.87
ST3GAL3-223	ENST00000479383	HMGXB3	Q12766	1538 aa		32.82	■■■□□ 2.85
ST3GAL3-223	ENST00000479383	SMARCA2	P51531	1590 aa		32.82	■■■□□ 2.84
ST3GAL3-223	ENST00000479383	DNAJC5	Q9H3Z4	198 aa		32.78	■■■□□ 2.84
ST3GAL3-223	ENST00000479383	ERCC6	Q03468	1493 aa		32.76	■■■□□ 2.84
ST3GAL3-223	ENST00000479383	NES	P48681	1621 aa		32.73	■■■□□ 2.83
ST3GAL3-223	ENST00000479383	CUX2	O14529	1486 aa		32.71	■■■□□ 2.83
ST3GAL3-223	ENST00000479383	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	32.7	■■■□□ 2.83
ST3GAL3-223	ENST00000479383	BAZ1B	Q9UIG0	1483 aa	Known RBP	32.63	■■■□□ 2.81
ST3GAL3-223	ENST00000479383	PEG3	Q9GZU2	1588 aa		32.6	■■■□□ 2.81
ST3GAL3-223	ENST00000479383	MROH2B	Q7Z745	1585 aa		32.58	■■■□□ 2.81
ST3GAL3-223	ENST00000479383	THOC2	Q8NI27	1593 aa	Known RBP	32.43	■■■□□ 2.78
ST3GAL3-223	ENST00000479383	KIF21A	Q7Z4S6	1674 aa		32.37	■■■□□ 2.77
ST3GAL3-223	ENST00000479383	LAMC3	Q9Y6N6	1575 aa		32.34	■■■□□ 2.77
ST3GAL3-223	ENST00000479383	WIZ	O95785	1651 aa		32.25	■■■□□ 2.75
ST3GAL3-223	ENST00000479383	PDS5B	Q9NTI5	1447 aa		32.04	■■■□□ 2.72
ST3GAL3-223	ENST00000479383	CADPS	Q9ULU8	1353 aa		31.99	■■■□□ 2.71
ST3GAL3-223	ENST00000479383	MRC2	Q9UBG0	1479 aa		31.9	■■■□□ 2.7
ST3GAL3-223	ENST00000479383	WDR62	O43379	1518 aa		31.87	■■■□□ 2.69
ST3GAL3-223	ENST00000479383	RSF1	Q96T23	1441 aa	Predicted RBP	31.78	■■■□□ 2.68
ST3GAL3-223	ENST00000479383	CEP164	Q9UPV0	1460 aa		31.73	■■■□□ 2.67
ST3GAL3-223	ENST00000479383	TOP2A	P11388	1531 aa	Known RBP	31.71	■■■□□ 2.67
ST3GAL3-223	ENST00000479383	FANCD2	Q9BXW9	1451 aa		31.71	■■■□□ 2.67
ST3GAL3-223	ENST00000479383	CFTR	P13569	1480 aa		31.65	■■■□□ 2.66
ST3GAL3-223	ENST00000479383	URB2	Q14146	1524 aa	Known RBP	31.54	■■■□□ 2.64
ST3GAL3-223	ENST00000479383	PRDM2	Q13029	1718 aa		31.52	■■■□□ 2.64
ST3GAL3-223	ENST00000479383	TRIM41	Q8WV44	630 aa		31.39	■■■□□ 2.62
ST3GAL3-223	ENST00000479383	CCDC88B	A6NC98	1476 aa		31.35	■■■□□ 2.61
ST3GAL3-223	ENST00000479383	ZNF608	Q9ULD9	1512 aa	Predicted RBP	31.19	■■■□□ 2.58
ST3GAL3-223	ENST00000479383	TOPBP1	Q92547	1522 aa		31.14	■■■□□ 2.57
ST3GAL3-223	ENST00000479383	OSCAR	Q8IYS5	282 aa		31.11	■■■□□ 2.57
ST3GAL3-223	ENST00000479383	IFT140	Q96RY7	1462 aa		31.07	■■■□□ 2.56
ST3GAL3-223	ENST00000479383	EIF4G3	O43432	1585 aa	Known RBP	31.03	■■■□□ 2.56
ST3GAL3-223	ENST00000479383	DNMBP	Q6XZF7	1577 aa		31	■■■□□ 2.55
ST3GAL3-223	ENST00000479383	RIMBP3C	A6NJZ7	1639 aa		30.98	■■■□□ 2.55
ST3GAL3-223	ENST00000479383	RIMBP3B	A6NNM3	1639 aa		30.98	■■■□□ 2.55
ST3GAL3-223	ENST00000479383	RIMBP3	Q9UFD9	1639 aa		30.98	■■■□□ 2.55
ST3GAL3-223	ENST00000479383	TARBP1	Q13395	1621 aa	Known RBP	30.93	■■■□□ 2.54
ST3GAL3-223	ENST00000479383	CHD1	O14646	1710 aa		30.89	■■■□□ 2.54
ST3GAL3-223	ENST00000479383	ABCC8	Q09428	1581 aa		30.86	■■■□□ 2.53
ST3GAL3-223	ENST00000479383	AQR	O60306	1485 aa	Known RBP eCLIP	30.82	■■■□□ 2.53
ST3GAL3-223	ENST00000479383	ARHGEF11	O15085	1522 aa		30.81	■■■□□ 2.52
ST3GAL3-223	ENST00000479383	POLA1	P09884	1462 aa	Predicted RBP	30.81	■■■□□ 2.52
ST3GAL3-223	ENST00000479383	RAD54L2	Q9Y4B4	1467 aa		30.75	■■■□□ 2.51
ST3GAL3-223	ENST00000479383	FGD5	Q6ZNL6	1462 aa		30.62	■■■□□ 2.49
ST3GAL3-223	ENST00000479383	CUX1	P39880	1505 aa		30.62	■■■□□ 2.49
ST3GAL3-223	ENST00000479383	TDRD9	Q8NDG6	1382 aa	Known RBP	30.59	■■■□□ 2.49
ST3GAL3-223	ENST00000479383	SOGA1	O94964	1423 aa		30.57	■■■□□ 2.48
ST3GAL3-223	ENST00000479383	FBLN2	P98095	1184 aa		30.54	■■■□□ 2.48
ST3GAL3-223	ENST00000479383	ARAP1	Q96P48	1450 aa		30.53	■■■□□ 2.48
ST3GAL3-223	ENST00000479383	SNAPC4	Q5SXM2	1469 aa		30.52	■■■□□ 2.48
ST3GAL3-223	ENST00000479383	WDR97	A6NE52	1622 aa		30.52	■■■□□ 2.48
ST3GAL3-223	ENST00000479383	CYB5RL	Q6IPT4	315 aa		30.48	■■■□□ 2.47
ST3GAL3-223	ENST00000479383	CLASP1	Q7Z460	1538 aa		30.42	■■■□□ 2.46
ST3GAL3-223	ENST00000479383	PBRM1	Q86U86	1689 aa		30.41	■■■□□ 2.46
ST3GAL3-223	ENST00000479383	MAGI1	Q96QZ7	1491 aa	Predicted RBP	30.33	■■■□□ 2.45
ST3GAL3-223	ENST00000479383	GRIN2B	Q13224	1484 aa		30.32	■■■□□ 2.44
ST3GAL3-223	ENST00000479383	SYNJ1	O43426	1573 aa		30.29	■■■□□ 2.44
ST3GAL3-223	ENST00000479383	ABCA5	Q8WWZ7	1642 aa		30.28	■■■□□ 2.44
ST3GAL3-223	ENST00000479383	SUPT5H	O00267	1087 aa	Known RBP	30.27	■■■□□ 2.44
ST3GAL3-223	ENST00000479383	SYNJ2	O15056	1496 aa		30.26	■■■□□ 2.44
ST3GAL3-223	ENST00000479383	GAPVD1	Q14C86	1478 aa		30.24	■■■□□ 2.43
ST3GAL3-223	ENST00000479383	CHMP7	Q8WUX9	453 aa	Predicted RBP	30.23	■■■□□ 2.43
ST3GAL3-223	ENST00000479383	ABCA10	Q8WWZ4	1543 aa		30.2	■■■□□ 2.42
ST3GAL3-223	ENST00000479383	TRH	P20396	242 aa	Predicted RBP	30.14	■■■□□ 2.42
ST3GAL3-223	ENST00000479383	BIVM-ERCC5	R4GMW8	1640 aa		30.1	■■■□□ 2.41
ST3GAL3-223	ENST00000479383	ERCC6L2	Q5T890	1561 aa		30.06	■■■□□ 2.4
ST3GAL3-223	ENST00000479383	TOP2B	Q02880	1626 aa		30.05	■■■□□ 2.4
ST3GAL3-223	ENST00000479383	ADAMTS12	P58397	1594 aa		30.05	■■■□□ 2.4
ST3GAL3-223	ENST00000479383	CEP170	Q5SW79	1584 aa		30	■■■□□ 2.39
ST3GAL3-223	ENST00000479383	GRIN2A	Q12879	1464 aa		29.99	■■■□□ 2.39
ST3GAL3-223	ENST00000479383	WRN	Q14191	1432 aa	Predicted RBP eCLIP	29.97	■■■□□ 2.39
ST3GAL3-223	ENST00000479383	NUP160	Q12769	1436 aa		29.88	■■■□□ 2.37
ST3GAL3-223	ENST00000479383	SHROOM2	Q13796	1616 aa		29.85	■■■□□ 2.37
ST3GAL3-223	ENST00000479383	FHAD1	B1AJZ9	1412 aa		29.8	■■■□□ 2.36
ST3GAL3-223	ENST00000479383	ERICH3	Q5RHP9	1530 aa		29.8	■■■□□ 2.36
ST3GAL3-223	ENST00000479383	RUSC2	Q8N2Y8	1516 aa		29.65	■■■□□ 2.34
ST3GAL3-223	ENST00000479383	KIF13A	Q9H1H9	1805 aa		29.61	■■■□□ 2.33
ST3GAL3-223	ENST00000479383	PRG4	Q92954	1404 aa	Predicted RBP	29.59	■■■□□ 2.33
ST3GAL3-223	ENST00000479383	JPH4	Q96JJ6	628 aa		29.47	■■■□□ 2.31

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