RNA–Protein interactions for RNA: ENST00000415132.5

SSUH2-204, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 5

Gene SSUH2, Length 1,645 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-204ENST00000415132 NISCHQ9Y2I1 1504 aa46.44■■■■■ 5.02
SSUH2-204ENST00000415132 CCDC180Q9P1Z9 1646 aa41.06■■■■■ 4.16
SSUH2-204ENST00000415132 ABCC9O60706 1549 aa39.59■■■■□ 3.93
SSUH2-204ENST00000415132 ZCCHC6Q5VYS8 1495 aaKnown RBP38.81■■■■□ 3.8
SSUH2-204ENST00000415132 DCAF1Q9Y4B6 1507 aa38.49■■■■□ 3.75
SSUH2-204ENST00000415132 DCAF8L2P0C7V8 631 aa38.48■■■■□ 3.75
SSUH2-204ENST00000415132 NACADO15069 1562 aa38.47■■■■□ 3.75
SSUH2-204ENST00000415132 MYO15BQ96JP2 1530 aa38.47■■■■□ 3.75
SSUH2-204ENST00000415132 RB1CC1Q8TDY2 1594 aa38.36■■■■□ 3.73
SSUH2-204ENST00000415132 UNC13AQ9UPW8 1703 aa37.47■■■■□ 3.59
SSUH2-204ENST00000415132 SCRIBQ14160 1630 aa37.46■■■■□ 3.59
SSUH2-204ENST00000415132 BICRAQ9NZM4 1560 aa37.18■■■■□ 3.54
SSUH2-204ENST00000415132 PABPN1Q86U42 306 aaKnown RBP eCLIP37.06■■■■□ 3.524e-7■■■□□ 16.6
SSUH2-204ENST00000415132 SHROOM4Q9ULL8 1493 aa36.94■■■■□ 3.5
SSUH2-204ENST00000415132 EIF4G1Q04637 1599 aaKnown RBP36.15■■■■□ 3.38
SSUH2-204ENST00000415132 CECR2Q9BXF3 1484 aa36.09■■■■□ 3.37
SSUH2-204ENST00000415132 BAZ1AQ9NRL2 1556 aaPredicted RBP35.97■■■■□ 3.35
SSUH2-204ENST00000415132 SMARCA4P51532 1647 aa35.91■■■■□ 3.34
SSUH2-204ENST00000415132 CC2D2AQ9P2K1 1620 aa35.85■■■■□ 3.33
SSUH2-204ENST00000415132 DNAJC5BQ9UF47 199 aa35.81■■■■□ 3.32
SSUH2-204ENST00000415132 MROH2BQ7Z745 1585 aa35.78■■■■□ 3.32
SSUH2-204ENST00000415132 PEG3Q9GZU2 1588 aa35.59■■■■□ 3.29
SSUH2-204ENST00000415132 RSF1Q96T23 1441 aaPredicted RBP35.59■■■■□ 3.29
SSUH2-204ENST00000415132 ATAD2BQ9ULI0 1458 aa35.58■■■■□ 3.29
SSUH2-204ENST00000415132 SMARCA2P51531 1590 aa35.58■■■■□ 3.29
SSUH2-204ENST00000415132 NCAPD3P42695 1498 aa35.49■■■■□ 3.27
SSUH2-204ENST00000415132 WIZO95785 1651 aa35.4■■■■□ 3.26
SSUH2-204ENST00000415132 HMGXB3Q12766 1538 aa35.38■■■■□ 3.25
SSUH2-204ENST00000415132 BAZ1BQ9UIG0 1483 aaKnown RBP35.32■■■■□ 3.24
SSUH2-204ENST00000415132 TOP2AP11388 1531 aaKnown RBP35.1■■■■□ 3.21
SSUH2-204ENST00000415132 SUPT5HO00267 1087 aaKnown RBP35.03■■■■□ 3.2
SSUH2-204ENST00000415132 CCDC88BA6NC98 1476 aa34.67■■■■□ 3.14
SSUH2-204ENST00000415132 CADPSQ9ULU8 1353 aa34.47■■■■□ 3.11
SSUH2-204ENST00000415132 LAMC3Q9Y6N6 1575 aa34.46■■■■□ 3.11
SSUH2-204ENST00000415132 NESP48681 1621 aa34.42■■■■□ 3.1
SSUH2-204ENST00000415132 CFTRP13569 1480 aa34.4■■■■□ 3.1
SSUH2-204ENST00000415132 PDS5BQ9NTI5 1447 aa34.21■■■■□ 3.07
SSUH2-204ENST00000415132 PRDM2Q13029 1718 aa34.17■■■■□ 3.06
SSUH2-204ENST00000415132 ERCC6Q03468 1493 aa34.09■■■■□ 3.05
SSUH2-204ENST00000415132 FANCD2Q9BXW9 1451 aa34.07■■■■□ 3.05
SSUH2-204ENST00000415132 KIF21AQ7Z4S6 1674 aa34.03■■■■□ 3.04
SSUH2-204ENST00000415132 CEP164Q9UPV0 1460 aa33.98■■■■□ 3.03
SSUH2-204ENST00000415132 MRC2Q9UBG0 1479 aa33.82■■■■□ 3
SSUH2-204ENST00000415132 THOC2Q8NI27 1593 aaKnown RBP33.81■■■■□ 3
SSUH2-204ENST00000415132 WDR62O43379 1518 aa33.7■■■□□ 2.99
SSUH2-204ENST00000415132 URB2Q14146 1524 aaKnown RBP33.69■■■□□ 2.98
SSUH2-204ENST00000415132 ABCC8Q09428 1581 aa33.64■■■□□ 2.98
SSUH2-204ENST00000415132 DNMBPQ6XZF7 1577 aa33.61■■■□□ 2.97
SSUH2-204ENST00000415132 TOPBP1Q92547 1522 aa33.59■■■□□ 2.97
SSUH2-204ENST00000415132 CUX2O14529 1486 aa33.57■■■□□ 2.96
SSUH2-204ENST00000415132 WRNQ14191 1432 aaPredicted RBP eCLIP33.54■■■□□ 2.96
SSUH2-204ENST00000415132 CUX1P39880 1505 aa33.53■■■□□ 2.96
SSUH2-204ENST00000415132 SYNJ1O43426 1573 aa33.42■■■□□ 2.94
SSUH2-204ENST00000415132 TOP2BQ02880 1626 aa33.42■■■□□ 2.94
SSUH2-204ENST00000415132 BIVM-ERCC5R4GMW8 1640 aa33.4■■■□□ 2.94
SSUH2-204ENST00000415132 POLA1P09884 1462 aaPredicted RBP33.35■■■□□ 2.93
SSUH2-204ENST00000415132 FGD5Q6ZNL6 1462 aa33.33■■■□□ 2.93
SSUH2-204ENST00000415132 IFT140Q96RY7 1462 aa33.25■■■□□ 2.91
SSUH2-204ENST00000415132 SOGA1O94964 1423 aa33.21■■■□□ 2.91
SSUH2-204ENST00000415132 TARBP1Q13395 1621 aaKnown RBP33.19■■■□□ 2.9
SSUH2-204ENST00000415132 RAD54L2Q9Y4B4 1467 aa33.17■■■□□ 2.9
SSUH2-204ENST00000415132 TRIM41Q8WV44 630 aa33.1■■■□□ 2.89
SSUH2-204ENST00000415132 ABCA10Q8WWZ4 1543 aa33.07■■■□□ 2.88
SSUH2-204ENST00000415132 CHIC1Q5VXU3 224 aa33.05■■■□□ 2.88
SSUH2-204ENST00000415132 WDR97A6NE52 1622 aa33.05■■■□□ 2.88
SSUH2-204ENST00000415132 ZNF608Q9ULD9 1512 aaPredicted RBP33.03■■■□□ 2.88
SSUH2-204ENST00000415132 EIF4G3O43432 1585 aaKnown RBP32.94■■■□□ 2.86
SSUH2-204ENST00000415132 TDRD9Q8NDG6 1382 aaKnown RBP32.94■■■□□ 2.86
SSUH2-204ENST00000415132 AQRO60306 1485 aaKnown RBP eCLIP32.9■■■□□ 2.861e-6■■■■□ 21.5
SSUH2-204ENST00000415132 ABCA5Q8WWZ7 1642 aa32.89■■■□□ 2.86
SSUH2-204ENST00000415132 GAPVD1Q14C86 1478 aa32.84■■■□□ 2.85
SSUH2-204ENST00000415132 KIF27Q86VH2 1401 aa32.81■■■□□ 2.84
SSUH2-204ENST00000415132 GRIN2BQ13224 1484 aa32.77■■■□□ 2.84
SSUH2-204ENST00000415132 PBRM1Q86U86 1689 aa32.72■■■□□ 2.83
SSUH2-204ENST00000415132 ERICH3Q5RHP9 1530 aa32.69■■■□□ 2.82
SSUH2-204ENST00000415132 MAGI1Q96QZ7 1491 aaPredicted RBP32.64■■■□□ 2.82
SSUH2-204ENST00000415132 SNAPC4Q5SXM2 1469 aa32.64■■■□□ 2.82
SSUH2-204ENST00000415132 RUSC2Q8N2Y8 1516 aa32.63■■■□□ 2.81
SSUH2-204ENST00000415132 IGF1RP08069 1367 aa32.59■■■□□ 2.81
SSUH2-204ENST00000415132 EEA1Q15075 1411 aa32.57■■■□□ 2.8
SSUH2-204ENST00000415132 ADAMTS12P58397 1594 aa32.52■■■□□ 2.8
SSUH2-204ENST00000415132 SYNJ2O15056 1496 aa32.5■■■□□ 2.79
SSUH2-204ENST00000415132 FHAD1B1AJZ9 1412 aa32.5■■■□□ 2.79
SSUH2-204ENST00000415132 CUL7Q14999 1698 aa32.49■■■□□ 2.79
SSUH2-204ENST00000415132 CHMP7Q8WUX9 453 aaPredicted RBP32.4■■■□□ 2.78
SSUH2-204ENST00000415132 CARMIL1Q5VZK9 1371 aa32.4■■■□□ 2.78
SSUH2-204ENST00000415132 CSRNP3Q8WYN3 585 aa32.4■■■□□ 2.78
SSUH2-204ENST00000415132 CHD1O14646 1710 aa32.4■■■□□ 2.78
SSUH2-204ENST00000415132 FBLN2P98095 1184 aa32.37■■■□□ 2.77
SSUH2-204ENST00000415132 GRIN2AQ12879 1464 aa32.35■■■□□ 2.77
SSUH2-204ENST00000415132 FAM9AQ8IZU1 332 aaPredicted RBP32.35■■■□□ 2.77
SSUH2-204ENST00000415132 PRXQ9BXM0 1461 aa32.32■■■□□ 2.77
SSUH2-204ENST00000415132 RAPGEF2Q9Y4G8 1499 aa32.28■■■□□ 2.76
SSUH2-204ENST00000415132 OSCARQ8IYS5 282 aa32.24■■■□□ 2.75
SSUH2-204ENST00000415132 NUP160Q12769 1436 aa32.19■■■□□ 2.74
SSUH2-204ENST00000415132 KIF21BO75037 1637 aa32.17■■■□□ 2.74
SSUH2-204ENST00000415132 CEP170Q5SW79 1584 aa32.15■■■□□ 2.74
SSUH2-204ENST00000415132 CLASP1Q7Z460 1538 aa32.09■■■□□ 2.73
SSUH2-204ENST00000415132 KIAA0586Q9BVV6 1533 aa32.02■■■□□ 2.72
SSUH2-204ENST00000415132 GOLGA3Q08378 1498 aa32.01■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms