Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
PCDH11XQ9BZA7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
PCDH11XQ9BZA7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
PCDH11XQ9BZA7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
PCDH11XQ9BZA7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
PCDH11XQ9BZA7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
PCDH11XQ9BZA7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.75
PCDH11XQ9BZA7 ABCB10P1-201ENST00000614297 2181 ntBASIC32.2■■■□□ 2.75
PCDH11XQ9BZA7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC32.2■■■□□ 2.74
PCDH11XQ9BZA7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
PCDH11XQ9BZA7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
PCDH11XQ9BZA7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC32.19■■■□□ 2.74
PCDH11XQ9BZA7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
PCDH11XQ9BZA7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC32.18■■■□□ 2.74
PCDH11XQ9BZA7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
PCDH11XQ9BZA7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
PCDH11XQ9BZA7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC32.18■■■□□ 2.74
PCDH11XQ9BZA7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
PCDH11XQ9BZA7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
PCDH11XQ9BZA7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
PCDH11XQ9BZA7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC32.17■■■□□ 2.74
PCDH11XQ9BZA7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
PCDH11XQ9BZA7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC32.16■■■□□ 2.74
PCDH11XQ9BZA7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
PCDH11XQ9BZA7 RPS2P7-201ENST00000447334 885 ntBASIC32.15■■■□□ 2.74
PCDH11XQ9BZA7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
PCDH11XQ9BZA7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC32.14■■■□□ 2.74
PCDH11XQ9BZA7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
PCDH11XQ9BZA7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC32.14■■■□□ 2.74
PCDH11XQ9BZA7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
PCDH11XQ9BZA7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC32.14■■■□□ 2.73
PCDH11XQ9BZA7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
PCDH11XQ9BZA7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC32.13■■■□□ 2.73
PCDH11XQ9BZA7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
PCDH11XQ9BZA7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC32.13■■■□□ 2.73
PCDH11XQ9BZA7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC32.12■■■□□ 2.73
PCDH11XQ9BZA7 AL356441.2-201ENST00000443009 864 ntBASIC32.12■■■□□ 2.73
PCDH11XQ9BZA7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC32.12■■■□□ 2.73
PCDH11XQ9BZA7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC32.12■■■□□ 2.73
PCDH11XQ9BZA7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
PCDH11XQ9BZA7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC32.11■■■□□ 2.73
PCDH11XQ9BZA7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC32.11■■■□□ 2.73
PCDH11XQ9BZA7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC32.11■■■□□ 2.73
PCDH11XQ9BZA7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
PCDH11XQ9BZA7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC32.1■■■□□ 2.73
PCDH11XQ9BZA7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC32.1■■■□□ 2.73
PCDH11XQ9BZA7 LONRF2P2-201ENST00000439212 571 ntBASIC32.1■■■□□ 2.73
PCDH11XQ9BZA7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC32.1■■■□□ 2.73
PCDH11XQ9BZA7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
PCDH11XQ9BZA7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
PCDH11XQ9BZA7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
PCDH11XQ9BZA7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
PCDH11XQ9BZA7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC32.09■■■□□ 2.73
PCDH11XQ9BZA7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC32.09■■■□□ 2.73
PCDH11XQ9BZA7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
PCDH11XQ9BZA7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC32.08■■■□□ 2.73
PCDH11XQ9BZA7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC32.08■■■□□ 2.73
PCDH11XQ9BZA7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
PCDH11XQ9BZA7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
PCDH11XQ9BZA7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC32.08■■■□□ 2.73
PCDH11XQ9BZA7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
PCDH11XQ9BZA7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
PCDH11XQ9BZA7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC32.07■■■□□ 2.73
PCDH11XQ9BZA7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC32.07■■■□□ 2.72
PCDH11XQ9BZA7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
PCDH11XQ9BZA7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC32.07■■■□□ 2.72
PCDH11XQ9BZA7 AC019069.1-201ENST00000610008 1333 ntBASIC32.07■■■□□ 2.72
PCDH11XQ9BZA7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC32.06■■■□□ 2.72
PCDH11XQ9BZA7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
PCDH11XQ9BZA7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC32.06■■■□□ 2.72
PCDH11XQ9BZA7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
PCDH11XQ9BZA7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC32.05■■■□□ 2.72
PCDH11XQ9BZA7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC32.05■■■□□ 2.72
PCDH11XQ9BZA7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC32.05■■■□□ 2.72
PCDH11XQ9BZA7 AC239859.2-201ENST00000444165 318 ntBASIC32.04■■■□□ 2.72
PCDH11XQ9BZA7 Z92544.1-202ENST00000571933 1220 ntBASIC32.04■■■□□ 2.72
PCDH11XQ9BZA7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
PCDH11XQ9BZA7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC32.04■■■□□ 2.72
PCDH11XQ9BZA7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC32.03■■■□□ 2.72
PCDH11XQ9BZA7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
PCDH11XQ9BZA7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC32.03■■■□□ 2.72
PCDH11XQ9BZA7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
PCDH11XQ9BZA7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC32.02■■■□□ 2.72
PCDH11XQ9BZA7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC32.02■■■□□ 2.72
PCDH11XQ9BZA7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC32.02■■■□□ 2.72
PCDH11XQ9BZA7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
PCDH11XQ9BZA7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC32.01■■■□□ 2.72
PCDH11XQ9BZA7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC32.01■■■□□ 2.71
PCDH11XQ9BZA7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC32■■■□□ 2.71
PCDH11XQ9BZA7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC32■■■□□ 2.71
PCDH11XQ9BZA7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC32■■■□□ 2.71
PCDH11XQ9BZA7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC31.99■■■□□ 2.71
PCDH11XQ9BZA7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
PCDH11XQ9BZA7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
PCDH11XQ9BZA7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC31.98■■■□□ 2.71
PCDH11XQ9BZA7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
PCDH11XQ9BZA7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC31.98■■■□□ 2.71
PCDH11XQ9BZA7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
PCDH11XQ9BZA7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC31.97■■■□□ 2.71
PCDH11XQ9BZA7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC31.97■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms