Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH15Q96QU1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH15Q96QU1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
PCDH15Q96QU1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDH15Q96QU1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.17■■□□□ 1.46
PCDH15Q96QU1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.17■■□□□ 1.46
PCDH15Q96QU1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.17■■□□□ 1.46
PCDH15Q96QU1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDH15Q96QU1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.17■■□□□ 1.46
PCDH15Q96QU1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDH15Q96QU1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.17■■□□□ 1.46
PCDH15Q96QU1 AC019171.1-201ENST00000601251 1056 ntBASIC24.16■■□□□ 1.46
PCDH15Q96QU1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PCDH15Q96QU1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PCDH15Q96QU1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDH15Q96QU1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
PCDH15Q96QU1 AC139426.1-201ENST00000568218 2529 ntBASIC24.15■■□□□ 1.46
PCDH15Q96QU1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.15■■□□□ 1.46
PCDH15Q96QU1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.15■■□□□ 1.46
PCDH15Q96QU1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH15Q96QU1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH15Q96QU1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH15Q96QU1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
PCDH15Q96QU1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
PCDH15Q96QU1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
PCDH15Q96QU1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC24.14■■□□□ 1.45
PCDH15Q96QU1 Z92544.1-202ENST00000571933 1220 ntBASIC24.14■■□□□ 1.45
PCDH15Q96QU1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDH15Q96QU1 AC087393.1-201ENST00000582896 145 ntBASIC24.13■■□□□ 1.45
PCDH15Q96QU1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDH15Q96QU1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
PCDH15Q96QU1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH15Q96QU1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH15Q96QU1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC24.12■■□□□ 1.45
PCDH15Q96QU1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH15Q96QU1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDH15Q96QU1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH15Q96QU1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDH15Q96QU1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH15Q96QU1 WHAMMP3-201ENST00000611636 1609 ntBASIC24.12■■□□□ 1.45
PCDH15Q96QU1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH15Q96QU1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH15Q96QU1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH15Q96QU1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.11■■□□□ 1.45
PCDH15Q96QU1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.11■■□□□ 1.45
PCDH15Q96QU1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
PCDH15Q96QU1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.11■■□□□ 1.45
PCDH15Q96QU1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.1■■□□□ 1.45
PCDH15Q96QU1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
PCDH15Q96QU1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDH15Q96QU1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDH15Q96QU1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PCDH15Q96QU1 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PCDH15Q96QU1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDH15Q96QU1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.09■■□□□ 1.45
PCDH15Q96QU1 AC239859.2-201ENST00000444165 318 ntBASIC24.09■■□□□ 1.45
PCDH15Q96QU1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.09■■□□□ 1.45
PCDH15Q96QU1 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDH15Q96QU1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PCDH15Q96QU1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
PCDH15Q96QU1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
PCDH15Q96QU1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PCDH15Q96QU1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.07■■□□□ 1.44
PCDH15Q96QU1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
PCDH15Q96QU1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDH15Q96QU1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
PCDH15Q96QU1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.07■■□□□ 1.44
PCDH15Q96QU1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
PCDH15Q96QU1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH15Q96QU1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH15Q96QU1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.07■■□□□ 1.44
PCDH15Q96QU1 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.07■■□□□ 1.44
PCDH15Q96QU1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.06■■□□□ 1.44
PCDH15Q96QU1 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDH15Q96QU1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDH15Q96QU1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PCDH15Q96QU1 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
PCDH15Q96QU1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDH15Q96QU1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.05■■□□□ 1.44
PCDH15Q96QU1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
PCDH15Q96QU1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDH15Q96QU1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PCDH15Q96QU1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDH15Q96QU1 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
PCDH15Q96QU1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
PCDH15Q96QU1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.03■■□□□ 1.44
PCDH15Q96QU1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDH15Q96QU1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
PCDH15Q96QU1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.03■■□□□ 1.44
PCDH15Q96QU1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDH15Q96QU1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.03■■□□□ 1.44
PCDH15Q96QU1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.03■■□□□ 1.44
PCDH15Q96QU1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDH15Q96QU1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.03■■□□□ 1.44
PCDH15Q96QU1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PCDH15Q96QU1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDH15Q96QU1 RPS2P7-201ENST00000447334 885 ntBASIC24.02■■□□□ 1.44
PCDH15Q96QU1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDH15Q96QU1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDH15Q96QU1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms