Protein–RNA interactions for Protein: Q96N35

LINC00052, Putative uncharacterized protein encoded by LINC00052, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00052Q96N35 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINC00052Q96N35 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINC00052Q96N35 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LINC00052Q96N35 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
LINC00052Q96N35 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.9■□□□□ 0.78
LINC00052Q96N35 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LINC00052Q96N35 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LINC00052Q96N35 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LINC00052Q96N35 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
LINC00052Q96N35 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.9■□□□□ 0.78
LINC00052Q96N35 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LINC00052Q96N35 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.89■□□□□ 0.77
LINC00052Q96N35 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
LINC00052Q96N35 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.89■□□□□ 0.77
LINC00052Q96N35 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
LINC00052Q96N35 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LINC00052Q96N35 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
LINC00052Q96N35 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.88■□□□□ 0.77
LINC00052Q96N35 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC00052Q96N35 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.88■□□□□ 0.77
LINC00052Q96N35 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC00052Q96N35 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.88■□□□□ 0.77
LINC00052Q96N35 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
LINC00052Q96N35 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC00052Q96N35 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC00052Q96N35 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC00052Q96N35 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.88■□□□□ 0.77
LINC00052Q96N35 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
LINC00052Q96N35 AC136428.2-201ENST00000563187 214 ntBASIC19.87■□□□□ 0.77
LINC00052Q96N35 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC00052Q96N35 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
LINC00052Q96N35 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
LINC00052Q96N35 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC00052Q96N35 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LINC00052Q96N35 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
LINC00052Q96N35 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LINC00052Q96N35 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LINC00052Q96N35 AL391121.1-201ENST00000607967 1349 ntBASIC19.86■□□□□ 0.77
LINC00052Q96N35 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LINC00052Q96N35 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LINC00052Q96N35 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.86■□□□□ 0.77
LINC00052Q96N35 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LINC00052Q96N35 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LINC00052Q96N35 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LINC00052Q96N35 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LINC00052Q96N35 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LINC00052Q96N35 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LINC00052Q96N35 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00052Q96N35 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LINC00052Q96N35 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.84■□□□□ 0.77
LINC00052Q96N35 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00052Q96N35 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LINC00052Q96N35 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
LINC00052Q96N35 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LINC00052Q96N35 CAHM-201ENST00000604200 896 ntBASIC19.83■□□□□ 0.77
LINC00052Q96N35 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LINC00052Q96N35 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LINC00052Q96N35 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LINC00052Q96N35 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LINC00052Q96N35 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.82■□□□□ 0.76
LINC00052Q96N35 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LINC00052Q96N35 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LINC00052Q96N35 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LINC00052Q96N35 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.82■□□□□ 0.76
LINC00052Q96N35 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.82■□□□□ 0.76
LINC00052Q96N35 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
LINC00052Q96N35 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LINC00052Q96N35 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LINC00052Q96N35 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LINC00052Q96N35 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LINC00052Q96N35 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.82■□□□□ 0.76
LINC00052Q96N35 AC138932.3-201ENST00000567634 1902 ntBASIC19.82■□□□□ 0.76
LINC00052Q96N35 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LINC00052Q96N35 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
LINC00052Q96N35 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LINC00052Q96N35 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LINC00052Q96N35 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LINC00052Q96N35 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LINC00052Q96N35 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LINC00052Q96N35 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
LINC00052Q96N35 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LINC00052Q96N35 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LINC00052Q96N35 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LINC00052Q96N35 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LINC00052Q96N35 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC00052Q96N35 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LINC00052Q96N35 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.79■□□□□ 0.76
LINC00052Q96N35 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC00052Q96N35 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LINC00052Q96N35 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC00052Q96N35 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC00052Q96N35 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
LINC00052Q96N35 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC00052Q96N35 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC00052Q96N35 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LINC00052Q96N35 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LINC00052Q96N35 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.77■□□□□ 0.76
LINC00052Q96N35 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LINC00052Q96N35 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LINC00052Q96N35 AP004833.2-201ENST00000532228 1454 ntBASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms