Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SRFBP1Q8NEF9 AC025884.2-201ENST00000553429 711 ntBASIC23.24■■□□□ 1.31
SRFBP1Q8NEF9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SRFBP1Q8NEF9 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.24■■□□□ 1.31
SRFBP1Q8NEF9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
SRFBP1Q8NEF9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SRFBP1Q8NEF9 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.23■■□□□ 1.31
SRFBP1Q8NEF9 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
SRFBP1Q8NEF9 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SRFBP1Q8NEF9 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
SRFBP1Q8NEF9 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SRFBP1Q8NEF9 MIR3960-201ENST00000583311 91 ntBASIC23.22■■□□□ 1.31
SRFBP1Q8NEF9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
SRFBP1Q8NEF9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
SRFBP1Q8NEF9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SRFBP1Q8NEF9 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SRFBP1Q8NEF9 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SRFBP1Q8NEF9 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SRFBP1Q8NEF9 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.21■■□□□ 1.31
SRFBP1Q8NEF9 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SRFBP1Q8NEF9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SRFBP1Q8NEF9 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.21■■□□□ 1.31
SRFBP1Q8NEF9 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.21■■□□□ 1.31
SRFBP1Q8NEF9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
SRFBP1Q8NEF9 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SRFBP1Q8NEF9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SRFBP1Q8NEF9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SRFBP1Q8NEF9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SRFBP1Q8NEF9 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
SRFBP1Q8NEF9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SRFBP1Q8NEF9 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
SRFBP1Q8NEF9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.19■■□□□ 1.3
SRFBP1Q8NEF9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SRFBP1Q8NEF9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.19■■□□□ 1.3
SRFBP1Q8NEF9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
SRFBP1Q8NEF9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SRFBP1Q8NEF9 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.18■■□□□ 1.3
SRFBP1Q8NEF9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SRFBP1Q8NEF9 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.18■■□□□ 1.3
SRFBP1Q8NEF9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.18■■□□□ 1.3
SRFBP1Q8NEF9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SRFBP1Q8NEF9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.17■■□□□ 1.3
SRFBP1Q8NEF9 RNF126P1-201ENST00000567452 1320 ntBASIC23.17■■□□□ 1.3
SRFBP1Q8NEF9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
SRFBP1Q8NEF9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SRFBP1Q8NEF9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.16■■□□□ 1.3
SRFBP1Q8NEF9 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
SRFBP1Q8NEF9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.16■■□□□ 1.3
SRFBP1Q8NEF9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
SRFBP1Q8NEF9 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SRFBP1Q8NEF9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.15■■□□□ 1.3
SRFBP1Q8NEF9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.15■■□□□ 1.3
SRFBP1Q8NEF9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SRFBP1Q8NEF9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.14■■□□□ 1.3
SRFBP1Q8NEF9 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.3
SRFBP1Q8NEF9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SRFBP1Q8NEF9 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SRFBP1Q8NEF9 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SRFBP1Q8NEF9 AC092803.2-201ENST00000564287 1899 ntBASIC23.13■■□□□ 1.29
SRFBP1Q8NEF9 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.13■■□□□ 1.29
SRFBP1Q8NEF9 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.13■■□□□ 1.29
SRFBP1Q8NEF9 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.13■■□□□ 1.29
SRFBP1Q8NEF9 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SRFBP1Q8NEF9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SRFBP1Q8NEF9 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.12■■□□□ 1.29
SRFBP1Q8NEF9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SRFBP1Q8NEF9 RP9P-202ENST00000450133 1212 ntBASIC23.12■■□□□ 1.29
SRFBP1Q8NEF9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.12■■□□□ 1.29
SRFBP1Q8NEF9 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SRFBP1Q8NEF9 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SRFBP1Q8NEF9 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SRFBP1Q8NEF9 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SRFBP1Q8NEF9 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.11■■□□□ 1.29
SRFBP1Q8NEF9 AC007029.1-201ENST00000604183 313 ntBASIC23.11■■□□□ 1.29
SRFBP1Q8NEF9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SRFBP1Q8NEF9 AC091060.1-201ENST00000623524 1766 ntBASIC23.1■■□□□ 1.29
SRFBP1Q8NEF9 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.1■■□□□ 1.29
SRFBP1Q8NEF9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.09■■□□□ 1.29
SRFBP1Q8NEF9 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.09■■□□□ 1.29
SRFBP1Q8NEF9 HSD17B1P1-201ENST00000590052 955 ntBASIC23.09■■□□□ 1.29
SRFBP1Q8NEF9 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SRFBP1Q8NEF9 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SRFBP1Q8NEF9 AC145676.1-201ENST00000514988 2004 ntBASIC23.09■■□□□ 1.29
SRFBP1Q8NEF9 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
SRFBP1Q8NEF9 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.09■■□□□ 1.29
SRFBP1Q8NEF9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
SRFBP1Q8NEF9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
SRFBP1Q8NEF9 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.08■■□□□ 1.29
SRFBP1Q8NEF9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
SRFBP1Q8NEF9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SRFBP1Q8NEF9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
SRFBP1Q8NEF9 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SRFBP1Q8NEF9 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.07■■□□□ 1.28
SRFBP1Q8NEF9 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SRFBP1Q8NEF9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SRFBP1Q8NEF9 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.07■■□□□ 1.28
SRFBP1Q8NEF9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SRFBP1Q8NEF9 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SRFBP1Q8NEF9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SRFBP1Q8NEF9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms